RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PLA2G2DQ9UNK4 145 aa5.4□□□□□ -1.54
PDLIM5-213ENST00000509357 LEPROTO15243 131 aa5.39□□□□□ -1.55
PDLIM5-213ENST00000509357 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
PDLIM5-213ENST00000509357 TP73-AS1Q9UF72 201 aa5.39□□□□□ -1.55
PDLIM5-213ENST00000509357 E9PLD3 99 aa5.38□□□□□ -1.55
PDLIM5-213ENST00000509357 M0QXV9 152 aa5.38□□□□□ -1.55
PDLIM5-213ENST00000509357 PFN2P35080 140 aa5.38□□□□□ -1.55
PDLIM5-213ENST00000509357 ERG28Q9UKR5 140 aa5.38□□□□□ -1.55
PDLIM5-213ENST00000509357 A0A0U1RRA0 63 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 J3QQQ9 107 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 SMIM13P0DJ93 91 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 SRSF9Q13242 221 aaKnown RBP eCLIP5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 PLEKHB2Q96CS7 222 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 LINC01600Q96MT4 127 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 SND1-IT1Q9HBX3 110 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 NDUFA12Q9UI09 145 aa5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 TMA7Q9Y2S6 64 aaKnown RBP5.37□□□□□ -1.55
PDLIM5-213ENST00000509357 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
PDLIM5-213ENST00000509357 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
PDLIM5-213ENST00000509357 DAND5Q8N907 189 aa5.36□□□□□ -1.55
PDLIM5-213ENST00000509357 LITAFQ99732 161 aa5.36□□□□□ -1.55
PDLIM5-213ENST00000509357 IGLV7-43P04211 117 aa5.35□□□□□ -1.55
PDLIM5-213ENST00000509357 S100A6P06703 90 aa5.35□□□□□ -1.55
PDLIM5-213ENST00000509357 VPREB1P12018 145 aa5.35□□□□□ -1.55
PDLIM5-213ENST00000509357 LBHQ53QV2 105 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-213ENST00000509357 PCP2Q8IVA1 136 aa5.35□□□□□ -1.55
PDLIM5-213ENST00000509357 DIRC1Q969H9 104 aa5.35□□□□□ -1.55
PDLIM5-213ENST00000509357 A0A0J9YXY3 114 aa5.34□□□□□ -1.55
PDLIM5-213ENST00000509357 S100A2P29034 98 aa5.34□□□□□ -1.55
PDLIM5-213ENST00000509357 MIR7-3HGQ8N6C7 128 aa5.34□□□□□ -1.55
PDLIM5-213ENST00000509357 C22orf24Q9Y442 160 aa5.34□□□□□ -1.55
PDLIM5-213ENST00000509357 IGLV5-37A0A075B6J1 123 aa5.33□□□□□ -1.56
PDLIM5-213ENST00000509357 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
PDLIM5-213ENST00000509357 MYMXA0A1B0GTQ4 84 aa5.32□□□□□ -1.56
PDLIM5-213ENST00000509357 LINC00158P58513 81 aa5.32□□□□□ -1.56
PDLIM5-213ENST00000509357 HERVK_113P61574 105 aa5.32□□□□□ -1.56
PDLIM5-213ENST00000509357 COX17Q14061 63 aa5.32□□□□□ -1.56
PDLIM5-213ENST00000509357 LGALS3P17931 250 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-213ENST00000509357 HERV-K104P63124 156 aa5.31□□□□□ -1.56
PDLIM5-213ENST00000509357 MEIG1Q5JSS6 88 aa5.31□□□□□ -1.56
PDLIM5-213ENST00000509357 LINC00167Q96N53 147 aa5.31□□□□□ -1.56
PDLIM5-213ENST00000509357 LOC107984156A0A0G2JMH3 177 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 GAGE10A6NGK3 116 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 RPL37AP8A6NKH3 93 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 ZNF815PA8K554 130 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 H0Y9J4 135 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 NMUP48645 174 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 NPC2P61916 151 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 PYY3Q5JQD4 70 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 MRPL55Q7Z7F7 128 aaKnown RBP5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 ARL17AQ8IVW1 177 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 NKAPP1Q8N9T2 125 aa5.3□□□□□ -1.56
PDLIM5-213ENST00000509357 C20orf202A1L168 122 aa5.29□□□□□ -1.56
PDLIM5-213ENST00000509357 JOSD1Q15040 202 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-213ENST00000509357 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
PDLIM5-213ENST00000509357 TMEM238C9JI98 176 aa5.28□□□□□ -1.56
PDLIM5-213ENST00000509357 NCR3O14931 201 aa5.28□□□□□ -1.56
PDLIM5-213ENST00000509357 ZNF861PO60384 105 aa5.28□□□□□ -1.56
PDLIM5-213ENST00000509357 SCGB1D1O95968 90 aa5.28□□□□□ -1.56
PDLIM5-213ENST00000509357 PRR26Q8N8Z3 221 aa5.28□□□□□ -1.56
PDLIM5-213ENST00000509357 IGLV1-50A0A075B6I6 118 aa5.27□□□□□ -1.57
PDLIM5-213ENST00000509357 IGKV2-28A0A075B6P5 120 aa5.27□□□□□ -1.57
PDLIM5-213ENST00000509357 BCE1O60756 84 aa5.27□□□□□ -1.57
PDLIM5-213ENST00000509357 IGKV2D-28P01615 120 aa5.27□□□□□ -1.57
PDLIM5-213ENST00000509357 RPL28P46779 137 aaKnown RBP5.27□□□□□ -1.57
PDLIM5-213ENST00000509357 KRTAP13-1Q8IUC0 172 aa5.27□□□□□ -1.57
PDLIM5-213ENST00000509357 BOD1L2Q8IYS8 172 aa5.27□□□□□ -1.57
PDLIM5-213ENST00000509357 M0R378 163 aa5.26□□□□□ -1.57
PDLIM5-213ENST00000509357 TIMM17BO60830 172 aa5.26□□□□□ -1.57
PDLIM5-213ENST00000509357 RPL24P83731 157 aaKnown RBP5.26□□□□□ -1.57
PDLIM5-213ENST00000509357 LINC00308Q8TCZ7 52 aa5.26□□□□□ -1.57
PDLIM5-213ENST00000509357 UBE2AP49459 152 aa5.25□□□□□ -1.57
PDLIM5-213ENST00000509357 SPANXDQ9BXN6 97 aa5.25□□□□□ -1.57
PDLIM5-213ENST00000509357 SPANXCQ9NY87 97 aa5.25□□□□□ -1.57
PDLIM5-213ENST00000509357 PAM16Q9Y3D7 125 aa5.25□□□□□ -1.57
PDLIM5-213ENST00000509357 LRP2P98164 4655 aa5.24□□□□□ -1.57
PDLIM5-213ENST00000509357 TRBV10-3A0A0K0K1G6 114 aa5.24□□□□□ -1.57
PDLIM5-213ENST00000509357 KRTAP4-16G5E9R7 235 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-213ENST00000509357 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
PDLIM5-213ENST00000509357 C2orf91Q6ZV80 131 aa5.24□□□□□ -1.57
PDLIM5-213ENST00000509357 C14orf144Q96I85 54 aa5.24□□□□□ -1.57
PDLIM5-213ENST00000509357 KRTAP1-4P0C5Y4 121 aa5.23□□□□□ -1.57
PDLIM5-213ENST00000509357 COX8AP10176 69 aa5.23□□□□□ -1.57
PDLIM5-213ENST00000509357 SPRR1AP35321 89 aa5.23□□□□□ -1.57
PDLIM5-213ENST00000509357 SPATA45Q537H7 98 aa5.23□□□□□ -1.57
PDLIM5-213ENST00000509357 LINC00337Q8N6G1 96 aa5.23□□□□□ -1.57
PDLIM5-213ENST00000509357 TMEM126AQ9H061 195 aa5.23□□□□□ -1.57
PDLIM5-213ENST00000509357 LOC105371267A0A1B0GV96 52 aa5.22□□□□□ -1.57
PDLIM5-213ENST00000509357 LINC00587B1AMM8 73 aa5.22□□□□□ -1.57
PDLIM5-213ENST00000509357 NDUFC2O95298 119 aa5.22□□□□□ -1.57
PDLIM5-213ENST00000509357 IGLV6-57P01721 117 aa5.22□□□□□ -1.57
PDLIM5-213ENST00000509357 PRLHP81277 87 aa5.22□□□□□ -1.57
PDLIM5-213ENST00000509357 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
PDLIM5-213ENST00000509357 MUSTN1Q8IVN3 82 aa5.22□□□□□ -1.57
PDLIM5-213ENST00000509357 SCGB1D4Q6XE38 83 aa5.21□□□□□ -1.58
PDLIM5-213ENST00000509357 TRBV10-2A0A0K0K1G8 114 aa5.2□□□□□ -1.58
PDLIM5-213ENST00000509357 DLEU1O43261 78 aa5.2□□□□□ -1.58
PDLIM5-213ENST00000509357 CRYGAP11844 174 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms