RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 C21orf62-AS1Q17RA5 79 aa9.9□□□□□ -0.83
PHF3-209ENST00000509330 GAGE2EQ4V326 116 aa9.9□□□□□ -0.83
PHF3-209ENST00000509330 C15orf53Q8NAA6 179 aa9.9□□□□□ -0.83
PHF3-209ENST00000509330 PPDPFLQ8WWR9 84 aa9.9□□□□□ -0.83
PHF3-209ENST00000509330 GAGE2DQ9UEU5 116 aa9.9□□□□□ -0.83
PHF3-209ENST00000509330 COX17Q14061 63 aa9.89□□□□□ -0.83
PHF3-209ENST00000509330 DNAH10Q8IVF4 4471 aa9.89□□□□□ -0.83
PHF3-209ENST00000509330 RPL18AQ02543 176 aaKnown RBP9.89□□□□□ -0.83
PHF3-209ENST00000509330 SLPIP03973 132 aa9.87□□□□□ -0.83
PHF3-209ENST00000509330 DNAH10OSP0CZ25 163 aa9.87□□□□□ -0.83
PHF3-209ENST00000509330 PRKDCP78527 4128 aaKnown RBP9.87□□□□□ -0.83
PHF3-209ENST00000509330 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
PHF3-209ENST00000509330 DNAH7Q8WXX0 4024 aa9.86□□□□□ -0.83
PHF3-209ENST00000509330 PPDPFQ9H3Y8 114 aa9.85□□□□□ -0.83
PHF3-209ENST00000509330 DNAL4O96015 105 aa9.84□□□□□ -0.83
PHF3-209ENST00000509330 BAALC-AS2P0C853 105 aa9.84□□□□□ -0.83
PHF3-209ENST00000509330 MEGF8Q7Z7M0 2845 aa9.84□□□□□ -0.83
PHF3-209ENST00000509330 DNAH1Q9P2D7 4330 aa9.83□□□□□ -0.84
PHF3-209ENST00000509330 H3BT86 120 aa9.83□□□□□ -0.84
PHF3-209ENST00000509330 C6orf99Q4VX62 202 aa9.83□□□□□ -0.84
PHF3-209ENST00000509330 PLECQ15149 4684 aaKnown RBP9.83□□□□□ -0.84
PHF3-209ENST00000509330 UBE2DNLQ8IWF7 75 aa9.82□□□□□ -0.84
PHF3-209ENST00000509330 PCP4P48539 62 aa9.81□□□□□ -0.84
PHF3-209ENST00000509330 B9D2Q9BPU9 175 aa9.81□□□□□ -0.84
PHF3-209ENST00000509330 TMEM126AQ9H061 195 aa9.81□□□□□ -0.84
PHF3-209ENST00000509330 NDUFC2O95298 119 aa9.81□□□□□ -0.84
PHF3-209ENST00000509330 USP17L23D6RBM5 183 aa9.81□□□□□ -0.84
PHF3-209ENST00000509330 Q6ZRP5 223 aa9.81□□□□□ -0.84
PHF3-209ENST00000509330 KRTAP1-5Q9BYS1 174 aa9.81□□□□□ -0.84
PHF3-209ENST00000509330 TRACP01848 142 aa9.8□□□□□ -0.84
PHF3-209ENST00000509330 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
PHF3-209ENST00000509330 GVQW2A0A096LPI5 108 aaPredicted RBP9.79□□□□□ -0.84
PHF3-209ENST00000509330 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
PHF3-209ENST00000509330 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
PHF3-209ENST00000509330 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
PHF3-209ENST00000509330 H0YGX0 51 aa9.78□□□□□ -0.84
PHF3-209ENST00000509330 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
PHF3-209ENST00000509330 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
PHF3-209ENST00000509330 M0QXV9 152 aa9.77□□□□□ -0.85
PHF3-209ENST00000509330 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
PHF3-209ENST00000509330 SIGMAR1Q99720 223 aa9.75□□□□□ -0.85
PHF3-209ENST00000509330 STARD9Q9P2P6 4700 aa9.75□□□□□ -0.85
PHF3-209ENST00000509330 XGP55808 180 aa9.75□□□□□ -0.85
PHF3-209ENST00000509330 MT-ATP8P03928 68 aa9.75□□□□□ -0.85
PHF3-209ENST00000509330 APLNQ9ULZ1 77 aa9.74□□□□□ -0.85
PHF3-209ENST00000509330 VPREB1P12018 145 aa9.73□□□□□ -0.85
PHF3-209ENST00000509330 FAM168BA1KXE4 195 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 IGLV6-57P01721 117 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 TRAV23DV6A0A075B6W5 121 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 PSCAO43653 123 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 Q8N814 137 aa9.72□□□□□ -0.85
PHF3-209ENST00000509330 C14orf132Q9NPU4 83 aa9.71□□□□□ -0.85
PHF3-209ENST00000509330 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.71□□□□□ -0.86
PHF3-209ENST00000509330 RMI2Q96E14 147 aa9.7□□□□□ -0.86
PHF3-209ENST00000509330 LINC01600Q96MT4 127 aa9.7□□□□□ -0.86
PHF3-209ENST00000509330 ORMDL1Q9P0S3 153 aa9.7□□□□□ -0.86
PHF3-209ENST00000509330 TGP01266 2768 aa9.7□□□□□ -0.86
PHF3-209ENST00000509330 MUC7Q8TAX7 377 aa9.69□□□□□ -0.86
PHF3-209ENST00000509330 M0R2N4 97 aa9.69□□□□□ -0.86
PHF3-209ENST00000509330 TTC32Q5I0X7 151 aa9.69□□□□□ -0.86
PHF3-209ENST00000509330 GAGE2AQ6NT46 116 aa9.69□□□□□ -0.86
PHF3-209ENST00000509330 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
PHF3-209ENST00000509330 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
PHF3-209ENST00000509330 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
PHF3-209ENST00000509330 NKAPP1Q8N9T2 125 aa9.67□□□□□ -0.86
PHF3-209ENST00000509330 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
PHF3-209ENST00000509330 DYNC2H1Q8NCM8 4307 aaKnown RBP9.66□□□□□ -0.86
PHF3-209ENST00000509330 FAM19A5Q7Z5A7 132 aaPredicted RBP9.66□□□□□ -0.86
PHF3-209ENST00000509330 IGKV2-24A0A0C4DH68 120 aa9.66□□□□□ -0.86
PHF3-209ENST00000509330 hADV29S1A0JD25 119 aa9.66□□□□□ -0.86
PHF3-209ENST00000509330 M0R378 163 aa9.66□□□□□ -0.86
PHF3-209ENST00000509330 Q6ZQY7 126 aa9.65□□□□□ -0.86
PHF3-209ENST00000509330 FBN3Q75N90 2809 aa9.63□□□□□ -0.87
PHF3-209ENST00000509330 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
PHF3-209ENST00000509330 COX7BP24311 80 aa9.63□□□□□ -0.87
PHF3-209ENST00000509330 NUPR2A6NF83 97 aa9.62□□□□□ -0.87
PHF3-209ENST00000509330 NHLRC4P0CG21 123 aaPredicted RBP9.62□□□□□ -0.87
PHF3-209ENST00000509330 SNCGO76070 127 aa9.6□□□□□ -0.87
PHF3-209ENST00000509330 FUSP35637 526 aaKnown RBP eCLIP9.6□□□□□ -0.87
PHF3-209ENST00000509330 KMT2AQ03164 3969 aa9.6□□□□□ -0.87
PHF3-209ENST00000509330 INAFM2P0DMQ5 153 aa9.6□□□□□ -0.87
PHF3-209ENST00000509330 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
PHF3-209ENST00000509330 LAMTOR3Q9UHA4 124 aa9.6□□□□□ -0.87
PHF3-209ENST00000509330 SMCR5Q8TEV8 140 aa9.6□□□□□ -0.87
PHF3-209ENST00000509330 LINC00167Q96N53 147 aa9.59□□□□□ -0.87
PHF3-209ENST00000509330 TMEM256-PLSCR3K7ERE1 68 aa9.58□□□□□ -0.88
PHF3-209ENST00000509330 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
PHF3-209ENST00000509330 F8WDY8 70 aa9.58□□□□□ -0.88
PHF3-209ENST00000509330 ELOF1P60002 83 aaKnown RBP9.58□□□□□ -0.88
PHF3-209ENST00000509330 A0A096LNI7 61 aa9.57□□□□□ -0.88
PHF3-209ENST00000509330 A0A1B0GX51 115 aa9.57□□□□□ -0.88
PHF3-209ENST00000509330 CHTF8P0CG12 524 aa9.57□□□□□ -0.88
PHF3-209ENST00000509330 LOC107984640A0A0U1RRK4 108 aa9.57□□□□□ -0.88
PHF3-209ENST00000509330 TLX1NBP0CAT3 122 aa9.57□□□□□ -0.88
PHF3-209ENST00000509330 DEFB105AQ8NG35 78 aa9.56□□□□□ -0.88
PHF3-209ENST00000509330 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
PHF3-209ENST00000509330 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms