RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 RGPD1P0DJD0 1748 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 QSER1Q2KHR3 1735 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 FMN2Q9NZ56 1722 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 CFDP00746 253 aaPredicted RBP0.72□□□□□ -2.29
DHFR-204ENST00000508282 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 COX8AP10176 69 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 Q5VSD8 79 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 CRIPTQ9P021 101 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 LRRC7Q96NW7 1537 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 RGPD2P0DJD1 1756 aa0.72□□□□□ -2.29
DHFR-204ENST00000508282 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
DHFR-204ENST00000508282 PIEZO2Q9H5I5 2752 aa0.71□□□□□ -2.3
DHFR-204ENST00000508282 PPRC1Q5VV67 1664 aaKnown RBP0.71□□□□□ -2.3
DHFR-204ENST00000508282 PTPRZ1P23471 2315 aaPredicted RBP0.71□□□□□ -2.3
DHFR-204ENST00000508282 LTN1O94822 1766 aa0.7□□□□□ -2.3
DHFR-204ENST00000508282 PTPRQQ9UMZ3 2332 aa0.7□□□□□ -2.3
DHFR-204ENST00000508282 CHD9Q3L8U1 2897 aa0.7□□□□□ -2.3
DHFR-204ENST00000508282 SPTY2D1-AS1A0A0U1RR47 76 aa0.7□□□□□ -2.3
DHFR-204ENST00000508282 RRBP1Q9P2E9 1410 aaKnown RBP0.7□□□□□ -2.3
DHFR-204ENST00000508282 ABCC1P33527 1531 aa0.69□□□□□ -2.3
DHFR-204ENST00000508282 H3BUT2 72 aa0.69□□□□□ -2.3
DHFR-204ENST00000508282 I3L3M4 83 aa0.69□□□□□ -2.3
DHFR-204ENST00000508282 SPINK1P00995 79 aa0.69□□□□□ -2.3
DHFR-204ENST00000508282 CFAP74Q9C0B2 1584 aa0.69□□□□□ -2.3
DHFR-204ENST00000508282 URB2Q14146 1524 aaKnown RBP0.69□□□□□ -2.3
DHFR-204ENST00000508282 NKTRP30414 1462 aaKnown RBP0.68□□□□□ -2.3
DHFR-204ENST00000508282 RGPD8O14715 1765 aaPredicted RBP0.68□□□□□ -2.3
DHFR-204ENST00000508282 RGPD5Q99666 1765 aa0.68□□□□□ -2.3
DHFR-204ENST00000508282 BVES-AS1Q5T3Y7 98 aa0.68□□□□□ -2.3
DHFR-204ENST00000508282 GAFA1Q96PS6 74 aa0.68□□□□□ -2.3
DHFR-204ENST00000508282 PIK3C2BO00750 1634 aa0.67□□□□□ -2.3
DHFR-204ENST00000508282 SPTBN1Q01082 2364 aaKnown RBP0.67□□□□□ -2.3
DHFR-204ENST00000508282 NDUFB1O75438 58 aa0.67□□□□□ -2.3
DHFR-204ENST00000508282 COX7BP24311 80 aa0.67□□□□□ -2.3
DHFR-204ENST00000508282 BCORQ6W2J9 1755 aa0.67□□□□□ -2.3
DHFR-204ENST00000508282 PTPN23Q9H3S7 1636 aa0.67□□□□□ -2.3
DHFR-204ENST00000508282 PKDREJQ9NTG1 2253 aa0.67□□□□□ -2.3
DHFR-204ENST00000508282 POLR1AO95602 1720 aaPredicted RBP0.67□□□□□ -2.3
DHFR-204ENST00000508282 TRAV21A0A0B4J279 112 aa0.66□□□□□ -2.3
DHFR-204ENST00000508282 CPSF4LA6NMK7 179 aaKnown RBP0.66□□□□□ -2.3
DHFR-204ENST00000508282 SPRR1BP22528 89 aa0.66□□□□□ -2.3
DHFR-204ENST00000508282 SPRR1AP35321 89 aa0.66□□□□□ -2.3
DHFR-204ENST00000508282 RPL38P63173 70 aaKnown RBP0.66□□□□□ -2.3
DHFR-204ENST00000508282 DEFB109BQ30KR1 87 aa0.66□□□□□ -2.3
DHFR-204ENST00000508282 WFDC9Q8NEX5 89 aa0.66□□□□□ -2.3
DHFR-204ENST00000508282 IGF2RP11717 2491 aa0.66□□□□□ -2.3
DHFR-204ENST00000508282 AKAP6Q13023 2319 aa0.65□□□□□ -2.3
DHFR-204ENST00000508282 TIAM2Q8IVF5 1701 aa0.65□□□□□ -2.31
DHFR-204ENST00000508282 ATP5EP2Q5VTU8 51 aa0.65□□□□□ -2.31
DHFR-204ENST00000508282 FXYD6Q9H0Q3 95 aa0.65□□□□□ -2.31
DHFR-204ENST00000508282 ANKARQ7Z5J8 1434 aa0.64□□□□□ -2.31
DHFR-204ENST00000508282 MAP3K1Q13233 1512 aa0.64□□□□□ -2.31
DHFR-204ENST00000508282 LRRIQ1Q96JM4 1722 aa0.64□□□□□ -2.31
DHFR-204ENST00000508282 DEFB121Q5J5C9 76 aa0.64□□□□□ -2.31
DHFR-204ENST00000508282 ZFYVE26Q68DK2 2539 aa0.64□□□□□ -2.31
DHFR-204ENST00000508282 USP24Q9UPU5 2620 aa0.63□□□□□ -2.31
DHFR-204ENST00000508282 NCOA2Q15596 1464 aa0.63□□□□□ -2.31
DHFR-204ENST00000508282 NAV2Q8IVL1 2488 aa0.63□□□□□ -2.31
DHFR-204ENST00000508282 MAGI3Q5TCQ9 1506 aa0.63□□□□□ -2.31
DHFR-204ENST00000508282 GVINP1Q7Z2Y8 2422 aa0.63□□□□□ -2.31
DHFR-204ENST00000508282 SCN11AQ9UI33 1791 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 ZNF831Q5JPB2 1677 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 A0A087WXM4 84 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 DEFB105AQ8NG35 78 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 C18orf32Q8TCD1 76 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 MRPL34Q9BQ48 92 aaKnown RBP0.62□□□□□ -2.31
DHFR-204ENST00000508282 USP32Q8NFA0 1604 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 ARFGEF2Q9Y6D5 1785 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 CLIP1P30622 1438 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 PREX1Q8TCU6 1659 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 ABCA8O94911 1581 aa0.62□□□□□ -2.31
DHFR-204ENST00000508282 CEP170BQ9Y4F5 1589 aaPredicted RBP0.62□□□□□ -2.31
DHFR-204ENST00000508282 CCL22O00626 93 aa0.61□□□□□ -2.31
DHFR-204ENST00000508282 U3KQA8 63 aa0.61□□□□□ -2.31
DHFR-204ENST00000508282 CSMD3Q7Z407 3707 aa0.61□□□□□ -2.31
DHFR-204ENST00000508282 SPINK4O60575 86 aa0.6□□□□□ -2.31
DHFR-204ENST00000508282 APLNQ9ULZ1 77 aa0.6□□□□□ -2.31
DHFR-204ENST00000508282 DOT1LQ8TEK3 1739 aa0.6□□□□□ -2.31
DHFR-204ENST00000508282 CFAP43Q8NDM7 1665 aa0.59□□□□□ -2.31
DHFR-204ENST00000508282 SMIM13P0DJ93 91 aa0.59□□□□□ -2.31
DHFR-204ENST00000508282 UMAD1C9J7I0 102 aa0.58□□□□□ -2.32
DHFR-204ENST00000508282 IFI27P40305 119 aaPredicted RBP0.58□□□□□ -2.32
DHFR-204ENST00000508282 MYO5CQ9NQX4 1742 aa0.58□□□□□ -2.32
DHFR-204ENST00000508282 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.58□□□□□ -2.326e-7■□□□□ 10.8
DHFR-204ENST00000508282 KLK9Q2XQG4 91 aa0.57□□□□□ -2.32
DHFR-204ENST00000508282 CCDC88BA6NC98 1476 aa0.56□□□□□ -2.32
DHFR-204ENST00000508282 UBR4Q5T4S7 5183 aa0.56□□□□□ -2.32
DHFR-204ENST00000508282 IFI6P09912 130 aa0.56□□□□□ -2.32
DHFR-204ENST00000508282 HEPN1Q6WQI6 88 aa0.56□□□□□ -2.32
DHFR-204ENST00000508282 NWD1Q149M9 1564 aa0.56□□□□□ -2.32
DHFR-204ENST00000508282 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
DHFR-204ENST00000508282 H1FX-AS1Q4G0G2 97 aa0.55□□□□□ -2.32
DHFR-204ENST00000508282 SMCO4Q9NRQ5 59 aa0.55□□□□□ -2.32
DHFR-204ENST00000508282 IQGAP3Q86VI3 1631 aa0.55□□□□□ -2.32
DHFR-204ENST00000508282 TNRC6CQ9HCJ0 1690 aaKnown RBP0.55□□□□□ -2.32
DHFR-204ENST00000508282 CNOT1A5YKK6 2376 aaKnown RBP0.55□□□□□ -2.32
DHFR-204ENST00000508282 COL6A3P12111 3177 aa0.55□□□□□ -2.32
DHFR-204ENST00000508282 NCOR1O75376 2440 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms