RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 IGHV3-16A0A0C4DH30 117 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 ANKRD17O75179 2603 aaKnown RBP1.47□□□□□ -2.17
NEDD4-205ENST00000506154 IGHV3-30-3P0DP02 117 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 SPANXA2-OT1Q8N9U9 137 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 LINC01558Q9Y6Z2 57 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 S4R3C0 116 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 IGKV1-17P01599 117 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 CKS2P33552 79 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 C15orf32Q32M92 178 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 C10orf113Q5VZT2 155 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 IGHV3-35A0A0C4DH35 117 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 DEFB109BQ30KR1 87 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 KRTAP19-4Q3LI73 84 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 Q8N377 158 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 SCGB3A1Q96QR1 104 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 I3L2K1 104 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 PDE6GP18545 87 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 CIRBPQ14011 172 aaKnown RBP1.47□□□□□ -2.17
NEDD4-205ENST00000506154 PRR4Q16378 134 aa1.47□□□□□ -2.17
NEDD4-205ENST00000506154 IGHV6-1A0A0B4J1U7 121 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 PSPHP1O15172 72 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 IGKV4-1P06312 121 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 C9orf163Q8N9P6 203 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 B9D2Q9BPU9 175 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 SAA1P0DJI8 122 aaPredicted RBP1.46□□□□□ -2.18
NEDD4-205ENST00000506154 KRTAP11-1Q8IUC1 163 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 MUC17Q685J3 4493 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 A0A1W2PNM2 257 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 KRTAP16-1A8MUX0 517 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 M0R2N4 97 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 LINC00467Q9BRT7 94 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 ALPK2Q86TB3 2170 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 IGLV8-61A0A075B6I0 122 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 IGKV3D-7A0A0C4DH55 119 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 FUSP35637 526 aaKnown RBP eCLIP1.46□□□□□ -2.18
NEDD4-205ENST00000506154 LYPD2Q6UXB3 125 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 MUC7Q8TAX7 377 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 SPTSSAQ969W0 71 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 IGHV1OR15-1A0A075B7D0 117 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 IGHV3-49A0A0A0MS15 119 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 IGHV7-81A0A0B4J1V7 117 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 B4DSR2 109 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 KRTAP4-16G5E9R7 235 aaPredicted RBP1.46□□□□□ -2.18
NEDD4-205ENST00000506154 KRTAP9-9Q9BYP9 154 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 KRTAP9-4Q9BYQ2 154 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 KCNQ1DNQ9H478 68 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 ZNRD1Q9P1U0 126 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 NDUFA12Q9UI09 145 aa1.46□□□□□ -2.18
NEDD4-205ENST00000506154 P0C880 135 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 TLX1NBP0CAT3 122 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 Q8NDZ9 215 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 LINC01006Q8NI28 216 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 PRR34Q9NV39 138 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 IGLV11-55A0A075B6I3 123 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 KRTAP26-1Q6PEX3 210 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 LENEPQ9Y5L5 61 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 UNC13CQ8NB66 2214 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 GIG44P09565 113 aaPredicted RBP1.45□□□□□ -2.18
NEDD4-205ENST00000506154 COX6CP09669 75 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 NREPQ16612 68 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 ARHGAP32A7KAX9 2087 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 A0A1B0GW54 56 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 HCG22E2RYF7 251 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 MRPL33O75394 65 aaKnown RBP1.45□□□□□ -2.18
NEDD4-205ENST00000506154 ENHOQ6UWT2 76 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 MIR7-3HGQ8N6C7 128 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 LIMD2Q9BT23 127 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 C14orf132Q9NPU4 83 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 ESPL1Q14674 2120 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 HIVEP3Q5T1R4 2406 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 EGFEM1PQ0D2K5 195 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 SCXQ7RTU7 201 aa1.45□□□□□ -2.18
NEDD4-205ENST00000506154 TRAV23DV6A0A075B6W5 121 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 A0A087WSZ3 146 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 JMJD7-PLA2G4BH0Y9G9 81 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 DEFB116Q30KQ4 102 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 WFDC9Q8NEX5 89 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 CIRBP-AS1Q8TBR5 109 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 DYNLRB2Q8TF09 96 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 H0YGX0 51 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 RBM3P98179 157 aaKnown RBP1.44□□□□□ -2.18
NEDD4-205ENST00000506154 SPINK9Q5DT21 86 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 A0A0J9YWU9 116 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 LINC00959A0A1B0GUT2 108 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 H3BUA1 57 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 K7EIM0 57 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 RNASE3P12724 160 aaKnown RBP1.44□□□□□ -2.18
NEDD4-205ENST00000506154 SNURFQ9Y675 71 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 PRR9Q5T870 116 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 SVILO95425 2214 aa1.44□□□□□ -2.18
NEDD4-205ENST00000506154 APC2O95996 2303 aa1.43□□□□□ -2.18
NEDD4-205ENST00000506154 IGLV4-60A0A075B6I1 120 aa1.43□□□□□ -2.18
NEDD4-205ENST00000506154 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.43□□□□□ -2.18
NEDD4-205ENST00000506154 SAA2P0DJI9 122 aaPredicted RBP1.43□□□□□ -2.18
NEDD4-205ENST00000506154 C9orf116Q5BN46 136 aaPredicted RBP1.43□□□□□ -2.18
NEDD4-205ENST00000506154 MINOS1Q5TGZ0 78 aa1.43□□□□□ -2.18
NEDD4-205ENST00000506154 ZFAND2AQ8N6M9 145 aa1.43□□□□□ -2.18
NEDD4-205ENST00000506154 C5orf56Q8N8D9 126 aa1.43□□□□□ -2.18
NEDD4-205ENST00000506154 SPRR4Q96PI1 79 aa1.43□□□□□ -2.18
NEDD4-205ENST00000506154 C8orf17Q9NRJ1 99 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms