RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 INAFM2P0DMQ5 153 aa11.48□□□□□ -0.57
TRAPPC11-204ENST00000505676 LINC00526Q96FQ7 95 aa11.48□□□□□ -0.57
TRAPPC11-204ENST00000505676 COL6A5A8TX70 2615 aa11.47□□□□□ -0.57
TRAPPC11-204ENST00000505676 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
TRAPPC11-204ENST00000505676 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
TRAPPC11-204ENST00000505676 CDIP1Q9H305 208 aa11.47□□□□□ -0.57
TRAPPC11-204ENST00000505676 IGLV6-57P01721 117 aa11.47□□□□□ -0.57
TRAPPC11-204ENST00000505676 PCP4P48539 62 aa11.47□□□□□ -0.57
TRAPPC11-204ENST00000505676 ACYP1P07311 99 aa11.46□□□□□ -0.57
TRAPPC11-204ENST00000505676 LINC00167Q96N53 147 aa11.46□□□□□ -0.57
TRAPPC11-204ENST00000505676 MDFIQ99750 246 aa11.46□□□□□ -0.57
TRAPPC11-204ENST00000505676 A0A087WYN8 130 aa11.45□□□□□ -0.58
TRAPPC11-204ENST00000505676 NCR3O14931 201 aa11.45□□□□□ -0.58
TRAPPC11-204ENST00000505676 SYCNQ0VAF6 134 aa11.45□□□□□ -0.58
TRAPPC11-204ENST00000505676 Q6ZRU5 148 aa11.45□□□□□ -0.58
TRAPPC11-204ENST00000505676 ANK2Q01484 3957 aa11.44□□□□□ -0.58
TRAPPC11-204ENST00000505676 LECT2O14960 151 aa11.44□□□□□ -0.58
TRAPPC11-204ENST00000505676 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
TRAPPC11-204ENST00000505676 ORMDL1Q9P0S3 153 aa11.44□□□□□ -0.58
TRAPPC11-204ENST00000505676 H3BQ85 93 aa11.43□□□□□ -0.58
TRAPPC11-204ENST00000505676 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC11-204ENST00000505676 Q9HAA7 133 aa11.43□□□□□ -0.58
TRAPPC11-204ENST00000505676 PKD1L1Q8TDX9 2849 aa11.43□□□□□ -0.58
TRAPPC11-204ENST00000505676 TLX1NBP0CAT3 122 aa11.42□□□□□ -0.58
TRAPPC11-204ENST00000505676 TRBV7-6A0A0J9YX20 115 aa11.41□□□□□ -0.58
TRAPPC11-204ENST00000505676 Q8N814 137 aa11.41□□□□□ -0.58
TRAPPC11-204ENST00000505676 Q8NDZ9 215 aa11.41□□□□□ -0.58
TRAPPC11-204ENST00000505676 M0R378 163 aa11.4□□□□□ -0.58
TRAPPC11-204ENST00000505676 RPL18AQ02543 176 aaKnown RBP11.4□□□□□ -0.58
TRAPPC11-204ENST00000505676 C6orf99Q4VX62 202 aa11.4□□□□□ -0.58
TRAPPC11-204ENST00000505676 VPREB1P12018 145 aa11.39□□□□□ -0.59
TRAPPC11-204ENST00000505676 TENM3Q9P273 2699 aa11.39□□□□□ -0.59
TRAPPC11-204ENST00000505676 TMEM256-PLSCR3K7ERE1 68 aa11.38□□□□□ -0.59
TRAPPC11-204ENST00000505676 GHRHP01286 108 aa11.38□□□□□ -0.59
TRAPPC11-204ENST00000505676 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
TRAPPC11-204ENST00000505676 TRAV23DV6A0A075B6W5 121 aa11.37□□□□□ -0.59
TRAPPC11-204ENST00000505676 LINC00575Q6W349 94 aa11.37□□□□□ -0.59
TRAPPC11-204ENST00000505676 DIRC1Q969H9 104 aa11.37□□□□□ -0.59
TRAPPC11-204ENST00000505676 OBSCN-AS1Q96MR7 158 aa11.37□□□□□ -0.59
TRAPPC11-204ENST00000505676 C22orf24Q9Y442 160 aa11.37□□□□□ -0.59
TRAPPC11-204ENST00000505676 PLA2G2DQ9UNK4 145 aa11.36□□□□□ -0.59
TRAPPC11-204ENST00000505676 USP17L23D6RBM5 183 aa11.36□□□□□ -0.59
TRAPPC11-204ENST00000505676 TRBV10-3A0A0K0K1G6 114 aa11.35□□□□□ -0.59
TRAPPC11-204ENST00000505676 JMJD7-PLA2G4BH0Y9G9 81 aa11.35□□□□□ -0.59
TRAPPC11-204ENST00000505676 XGP55808 180 aa11.35□□□□□ -0.59
TRAPPC11-204ENST00000505676 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
TRAPPC11-204ENST00000505676 APLNQ9ULZ1 77 aa11.35□□□□□ -0.59
TRAPPC11-204ENST00000505676 hADV29S1A0JD25 119 aa11.34□□□□□ -0.59
TRAPPC11-204ENST00000505676 NUPR2A6NF83 97 aa11.33□□□□□ -0.59
TRAPPC11-204ENST00000505676 Q6ZRP5 223 aa11.33□□□□□ -0.59
TRAPPC11-204ENST00000505676 ZNF73O43830 326 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC11-204ENST00000505676 UBE2DNLQ8IWF7 75 aa11.32□□□□□ -0.6
TRAPPC11-204ENST00000505676 GAGE2EQ4V326 116 aa11.32□□□□□ -0.6
TRAPPC11-204ENST00000505676 GAGE2DQ9UEU5 116 aa11.32□□□□□ -0.6
TRAPPC11-204ENST00000505676 HUWE1Q7Z6Z7 4374 aaKnown RBP11.32□□□□□ -0.6
TRAPPC11-204ENST00000505676 MT-ATP8P03928 68 aa11.31□□□□□ -0.6
TRAPPC11-204ENST00000505676 COX7BP24311 80 aa11.3□□□□□ -0.6
TRAPPC11-204ENST00000505676 IGLV5-37A0A075B6J1 123 aa11.29□□□□□ -0.6
TRAPPC11-204ENST00000505676 ELOF1P60002 83 aaKnown RBP11.29□□□□□ -0.6
TRAPPC11-204ENST00000505676 Q6Q795 121 aa11.29□□□□□ -0.6
TRAPPC11-204ENST00000505676 NKAPP1Q8N9T2 125 aa11.29□□□□□ -0.6
TRAPPC11-204ENST00000505676 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
TRAPPC11-204ENST00000505676 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC11-204ENST00000505676 NBEAL1Q6ZS30 2694 aa11.28□□□□□ -0.6
TRAPPC11-204ENST00000505676 SLPIP03973 132 aa11.28□□□□□ -0.6
TRAPPC11-204ENST00000505676 TTC32Q5I0X7 151 aa11.28□□□□□ -0.6
TRAPPC11-204ENST00000505676 C9orf129Q5T035 196 aaKnown RBP11.28□□□□□ -0.6
TRAPPC11-204ENST00000505676 MGAM2Q2M2H8 2515 aa11.27□□□□□ -0.61
TRAPPC11-204ENST00000505676 LOC107984640A0A0U1RRK4 108 aa11.27□□□□□ -0.61
TRAPPC11-204ENST00000505676 C21orf62-AS1Q17RA5 79 aa11.27□□□□□ -0.61
TRAPPC11-204ENST00000505676 SDIM1Q6ZPB5 146 aa11.26□□□□□ -0.61
TRAPPC11-204ENST00000505676 KCNQ1DNQ9H478 68 aa11.25□□□□□ -0.61
TRAPPC11-204ENST00000505676 PKIGQ9Y2B9 76 aa11.25□□□□□ -0.61
TRAPPC11-204ENST00000505676 GAGE2AQ6NT46 116 aa11.24□□□□□ -0.61
TRAPPC11-204ENST00000505676 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
TRAPPC11-204ENST00000505676 CASC10Q5T4H9 136 aa11.24□□□□□ -0.61
TRAPPC11-204ENST00000505676 CNBPP62633 177 aaKnown RBP11.23□□□□□ -0.61
TRAPPC11-204ENST00000505676 GAGE2BQ13066 116 aa11.23□□□□□ -0.61
TRAPPC11-204ENST00000505676 C14orf132Q9NPU4 83 aa11.23□□□□□ -0.61
TRAPPC11-204ENST00000505676 IMUPQ9GZP8 106 aa11.23□□□□□ -0.61
TRAPPC11-204ENST00000505676 PSCAO43653 123 aa11.22□□□□□ -0.61
TRAPPC11-204ENST00000505676 PDE6GP18545 87 aa11.21□□□□□ -0.61
TRAPPC11-204ENST00000505676 PRYO14603 147 aa11.21□□□□□ -0.62
TRAPPC11-204ENST00000505676 LINC00528Q8N1L1 170 aa11.21□□□□□ -0.62
TRAPPC11-204ENST00000505676 TRBV7-7A0A0K0K1E9 115 aa11.2□□□□□ -0.62
TRAPPC11-204ENST00000505676 CCKP06307 115 aa11.2□□□□□ -0.62
TRAPPC11-204ENST00000505676 Q6ZQY7 126 aa11.2□□□□□ -0.62
TRAPPC11-204ENST00000505676 C7orf33Q8WU49 177 aa11.2□□□□□ -0.62
TRAPPC11-204ENST00000505676 SERTAD4-AS1Q5TG53 156 aa11.19□□□□□ -0.62
TRAPPC11-204ENST00000505676 KRTAP1-5Q9BYS1 174 aa11.19□□□□□ -0.62
TRAPPC11-204ENST00000505676 RBM3P98179 157 aaKnown RBP11.17□□□□□ -0.62
TRAPPC11-204ENST00000505676 LOC110117498A0A087WWA1 95 aa11.17□□□□□ -0.62
TRAPPC11-204ENST00000505676 LAMTOR3Q9UHA4 124 aa11.16□□□□□ -0.62
TRAPPC11-204ENST00000505676 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
TRAPPC11-204ENST00000505676 DHRS4-AS1Q9P1J3 65 aa11.15□□□□□ -0.62
TRAPPC11-204ENST00000505676 IGLV1-50A0A075B6I6 118 aa11.15□□□□□ -0.63
TRAPPC11-204ENST00000505676 C16orf90A8MZG2 172 aa11.15□□□□□ -0.63
TRAPPC11-204ENST00000505676 A0A1B0GV72 72 aa11.14□□□□□ -0.63
TRAPPC11-204ENST00000505676 DNAH9Q9NYC9 4486 aa11.14□□□□□ -0.63
TRAPPC11-204ENST00000505676 SPRR1AP35321 89 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms