RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
PDLIM7-211ENST00000504318 TMEM223A0PJW6 202 aa8.61□□□□□ -1.03
PDLIM7-211ENST00000504318 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
PDLIM7-211ENST00000504318 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
PDLIM7-211ENST00000504318 Q6ZRP5 223 aa8.61□□□□□ -1.03
PDLIM7-211ENST00000504318 KRTAP11-1Q8IUC1 163 aa8.61□□□□□ -1.03
PDLIM7-211ENST00000504318 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
PDLIM7-211ENST00000504318 HIGD1BQ9P298 99 aa8.61□□□□□ -1.03
PDLIM7-211ENST00000504318 IGLV5-45A0A087WSX0 123 aa8.6□□□□□ -1.03
PDLIM7-211ENST00000504318 LEPROTO15243 131 aa8.6□□□□□ -1.03
PDLIM7-211ENST00000504318 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
PDLIM7-211ENST00000504318 LINC00469Q8N7U9 141 aa8.6□□□□□ -1.03
PDLIM7-211ENST00000504318 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
PDLIM7-211ENST00000504318 MYMXA0A1B0GTQ4 84 aa8.59□□□□□ -1.03
PDLIM7-211ENST00000504318 NDUFA1O15239 70 aa8.59□□□□□ -1.03
PDLIM7-211ENST00000504318 LGALS3P17931 250 aaKnown RBP8.59□□□□□ -1.03
PDLIM7-211ENST00000504318 RPL18AQ02543 176 aaKnown RBP8.59□□□□□ -1.03
PDLIM7-211ENST00000504318 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
PDLIM7-211ENST00000504318 PSORS1C2Q9UIG4 136 aa8.59□□□□□ -1.03
PDLIM7-211ENST00000504318 FAM168BA1KXE4 195 aa8.58□□□□□ -1.04
PDLIM7-211ENST00000504318 C2orf91Q6ZV80 131 aa8.58□□□□□ -1.04
PDLIM7-211ENST00000504318 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
PDLIM7-211ENST00000504318 ZNF815PA8K554 130 aa8.57□□□□□ -1.04
PDLIM7-211ENST00000504318 J3QQQ9 107 aa8.57□□□□□ -1.04
PDLIM7-211ENST00000504318 HSD52Q0P140 79 aa8.57□□□□□ -1.04
PDLIM7-211ENST00000504318 SNHG12Q9BXW3 62 aa8.57□□□□□ -1.04
PDLIM7-211ENST00000504318 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
PDLIM7-211ENST00000504318 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
PDLIM7-211ENST00000504318 TAL2Q16559 108 aa8.55□□□□□ -1.04
PDLIM7-211ENST00000504318 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
PDLIM7-211ENST00000504318 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
PDLIM7-211ENST00000504318 BATFQ16520 125 aa8.54□□□□□ -1.04
PDLIM7-211ENST00000504318 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
PDLIM7-211ENST00000504318 C9orf129Q5T035 196 aaKnown RBP8.54□□□□□ -1.04
PDLIM7-211ENST00000504318 SCGB1D4Q6XE38 83 aa8.54□□□□□ -1.04
PDLIM7-211ENST00000504318 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
PDLIM7-211ENST00000504318 LRP2P98164 4655 aa8.53□□□□□ -1.04
PDLIM7-211ENST00000504318 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
PDLIM7-211ENST00000504318 BVES-AS1Q5T3Y7 98 aa8.53□□□□□ -1.04
PDLIM7-211ENST00000504318 IGLV5-39A0A0G2JS06 123 aa8.52□□□□□ -1.05
PDLIM7-211ENST00000504318 SPINK8P0C7L1 97 aa8.52□□□□□ -1.05
PDLIM7-211ENST00000504318 TSPEAR-AS2P59090 65 aa8.52□□□□□ -1.05
PDLIM7-211ENST00000504318 NDUFC2-KCTD14E9PQ53 114 aa8.51□□□□□ -1.05
PDLIM7-211ENST00000504318 GAGE2EQ4V326 116 aa8.51□□□□□ -1.05
PDLIM7-211ENST00000504318 REG3GQ6UW15 175 aa8.51□□□□□ -1.05
PDLIM7-211ENST00000504318 Q8IZM0 81 aa8.51□□□□□ -1.05
PDLIM7-211ENST00000504318 GAGE2DQ9UEU5 116 aa8.51□□□□□ -1.05
PDLIM7-211ENST00000504318 A6NDN8 102 aa8.5□□□□□ -1.05
PDLIM7-211ENST00000504318 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
PDLIM7-211ENST00000504318 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
PDLIM7-211ENST00000504318 SFTA2Q6UW10 78 aa8.5□□□□□ -1.05
PDLIM7-211ENST00000504318 FAM19A5Q7Z5A7 132 aaPredicted RBP8.5□□□□□ -1.05
PDLIM7-211ENST00000504318 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
PDLIM7-211ENST00000504318 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
PDLIM7-211ENST00000504318 IGLV7-43P04211 117 aa8.49□□□□□ -1.05
PDLIM7-211ENST00000504318 HIST1H4GQ99525 98 aa8.49□□□□□ -1.05
PDLIM7-211ENST00000504318 SPANXB1Q9NS25 103 aaPredicted RBP8.49□□□□□ -1.05
PDLIM7-211ENST00000504318 CEND1Q8N111 149 aa8.48□□□□□ -1.05
PDLIM7-211ENST00000504318 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
PDLIM7-211ENST00000504318 A6NJY4 79 aa8.47□□□□□ -1.05
PDLIM7-211ENST00000504318 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
PDLIM7-211ENST00000504318 HERV-K104P63124 156 aa8.47□□□□□ -1.05
PDLIM7-211ENST00000504318 A0A0J9YXY3 114 aa8.46□□□□□ -1.06
PDLIM7-211ENST00000504318 M0QXV9 152 aa8.46□□□□□ -1.06
PDLIM7-211ENST00000504318 TIMM17BO60830 172 aa8.46□□□□□ -1.06
PDLIM7-211ENST00000504318 Q6ZVH6 145 aa8.46□□□□□ -1.06
PDLIM7-211ENST00000504318 COX7B2Q8TF08 81 aa8.45□□□□□ -1.06
PDLIM7-211ENST00000504318 TOMM7Q9P0U1 55 aa8.45□□□□□ -1.06
PDLIM7-211ENST00000504318 H0Y9J4 135 aa8.44□□□□□ -1.06
PDLIM7-211ENST00000504318 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
PDLIM7-211ENST00000504318 PRSS2P07478 247 aa8.43□□□□□ -1.06
PDLIM7-211ENST00000504318 C6orf226Q5I0X4 101 aa8.43□□□□□ -1.06
PDLIM7-211ENST00000504318 FXYD2P54710 66 aa8.42□□□□□ -1.06
PDLIM7-211ENST00000504318 CKS1BP61024 79 aa8.42□□□□□ -1.06
PDLIM7-211ENST00000504318 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
PDLIM7-211ENST00000504318 SPANXDQ9BXN6 97 aa8.42□□□□□ -1.06
PDLIM7-211ENST00000504318 XAGE1AQ9HD64 81 aa8.42□□□□□ -1.06
PDLIM7-211ENST00000504318 SPANXCQ9NY87 97 aa8.42□□□□□ -1.06
PDLIM7-211ENST00000504318 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
PDLIM7-211ENST00000504318 CXCL5P42830 114 aa8.41□□□□□ -1.06
PDLIM7-211ENST00000504318 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
PDLIM7-211ENST00000504318 DIRC1Q969H9 104 aa8.41□□□□□ -1.06
PDLIM7-211ENST00000504318 C22orf24Q9Y442 160 aa8.41□□□□□ -1.06
PDLIM7-211ENST00000504318 IFITM1P13164 125 aa8.4□□□□□ -1.06
PDLIM7-211ENST00000504318 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.06
PDLIM7-211ENST00000504318 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
PDLIM7-211ENST00000504318 LITAFQ99732 161 aa8.39□□□□□ -1.07
PDLIM7-211ENST00000504318 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
PDLIM7-211ENST00000504318 A0A1B0GV90 55 aa8.38□□□□□ -1.07
PDLIM7-211ENST00000504318 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
PDLIM7-211ENST00000504318 TAX1BP3O14907 124 aa8.38□□□□□ -1.07
PDLIM7-211ENST00000504318 UBE2BP63146 152 aa8.38□□□□□ -1.07
PDLIM7-211ENST00000504318 PPDPFQ9H3Y8 114 aa8.38□□□□□ -1.07
PDLIM7-211ENST00000504318 LPAP08519 4548 aa8.38□□□□□ -1.07
PDLIM7-211ENST00000504318 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
PDLIM7-211ENST00000504318 IGLV5-37A0A075B6J1 123 aa8.36□□□□□ -1.07
PDLIM7-211ENST00000504318 C9orf118A6NHY6 69 aa8.35□□□□□ -1.07
PDLIM7-211ENST00000504318 ZNF861PO60384 105 aa8.35□□□□□ -1.07
PDLIM7-211ENST00000504318 MRPL55Q7Z7F7 128 aaKnown RBP8.35□□□□□ -1.07
PDLIM7-211ENST00000504318 MUSTN1Q8IVN3 82 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms