RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 SERTAD4-AS1Q5TG53 156 aa11.37□□□□□ -0.59
DDR1-252ENST00000504152 KRTAP7-1Q8IUC3 87 aa11.37□□□□□ -0.59
DDR1-252ENST00000504152 MIR7-3HGQ8N6C7 128 aa11.37□□□□□ -0.59
DDR1-252ENST00000504152 C22orf24Q9Y442 160 aa11.37□□□□□ -0.59
DDR1-252ENST00000504152 A0A0J9YXY3 114 aa11.36□□□□□ -0.59
DDR1-252ENST00000504152 ZNF815PA8K554 130 aa11.36□□□□□ -0.59
DDR1-252ENST00000504152 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
DDR1-252ENST00000504152 LBHQ53QV2 105 aaPredicted RBP11.36□□□□□ -0.59
DDR1-252ENST00000504152 FAT1Q14517 4588 aa11.35□□□□□ -0.59
DDR1-252ENST00000504152 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
DDR1-252ENST00000504152 NKAPP1Q8N9T2 125 aa11.33□□□□□ -0.6
DDR1-252ENST00000504152 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
DDR1-252ENST00000504152 IGLV5-37A0A075B6J1 123 aa11.32□□□□□ -0.6
DDR1-252ENST00000504152 UBE2BP63146 152 aa11.32□□□□□ -0.6
DDR1-252ENST00000504152 MRPL55Q7Z7F7 128 aaKnown RBP11.32□□□□□ -0.6
DDR1-252ENST00000504152 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
DDR1-252ENST00000504152 DAND5Q8N907 189 aa11.31□□□□□ -0.6
DDR1-252ENST00000504152 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
DDR1-252ENST00000504152 VPS13BQ7Z7G8 4022 aa11.31□□□□□ -0.6
DDR1-252ENST00000504152 TIMM17BO60830 172 aa11.3□□□□□ -0.6
DDR1-252ENST00000504152 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
DDR1-252ENST00000504152 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 VPREB1P12018 145 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 ADAMTSL4-AS1Q5T5F5 129 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 PCP2Q8IVA1 136 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 BOD1L2Q8IYS8 172 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 LINC00167Q96N53 147 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 MIEN1Q9BRT3 115 aa11.29□□□□□ -0.6
DDR1-252ENST00000504152 INAFM2P0DMQ5 153 aa11.28□□□□□ -0.6
DDR1-252ENST00000504152 KRTAP10-4P60372 401 aaPredicted RBP11.28□□□□□ -0.6
DDR1-252ENST00000504152 PSORS1C2Q9UIG4 136 aa11.28□□□□□ -0.6
DDR1-252ENST00000504152 PRR3P79522 188 aaKnown RBP11.27□□□□□ -0.61
DDR1-252ENST00000504152 HERC1Q15751 4861 aa11.27□□□□□ -0.61
DDR1-252ENST00000504152 GAGE10A6NGK3 116 aa11.26□□□□□ -0.61
DDR1-252ENST00000504152 RPL37AP8A6NKH3 93 aa11.25□□□□□ -0.61
DDR1-252ENST00000504152 C1orf137Q5JT78 98 aa11.25□□□□□ -0.61
DDR1-252ENST00000504152 LITAFQ99732 161 aa11.25□□□□□ -0.61
DDR1-252ENST00000504152 TMEM238C9JI98 176 aa11.24□□□□□ -0.61
DDR1-252ENST00000504152 M0R378 163 aa11.24□□□□□ -0.61
DDR1-252ENST00000504152 KRTAP11-1Q8IUC1 163 aa11.24□□□□□ -0.61
DDR1-252ENST00000504152 Q8NDZ9 215 aa11.24□□□□□ -0.61
DDR1-252ENST00000504152 NPC2P61916 151 aa11.23□□□□□ -0.61
DDR1-252ENST00000504152 VAMP8Q9BV40 100 aa11.23□□□□□ -0.61
DDR1-252ENST00000504152 LINC00308Q8TCZ7 52 aa11.22□□□□□ -0.61
DDR1-252ENST00000504152 PAM16Q9Y3D7 125 aa11.22□□□□□ -0.61
DDR1-252ENST00000504152 IGLV1-50A0A075B6I6 118 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 NDUFC2O95298 119 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 SPATA45Q537H7 98 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 PYY3Q5JQD4 70 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 Q6ZVH6 145 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 COPS9Q8WXC6 57 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 SPANXDQ9BXN6 97 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 SPANXCQ9NY87 97 aa11.21□□□□□ -0.61
DDR1-252ENST00000504152 NCR3O14931 201 aa11.2□□□□□ -0.62
DDR1-252ENST00000504152 COX8AP10176 69 aa11.2□□□□□ -0.62
DDR1-252ENST00000504152 SOSTDC1Q6X4U4 206 aa11.2□□□□□ -0.62
DDR1-252ENST00000504152 IGKV2-28A0A075B6P5 120 aa11.19□□□□□ -0.62
DDR1-252ENST00000504152 IGKV2D-28P01615 120 aa11.19□□□□□ -0.62
DDR1-252ENST00000504152 TRBV10-2A0A0K0K1G8 114 aa11.18□□□□□ -0.62
DDR1-252ENST00000504152 EIF4EBP3O60516 100 aaPredicted RBP11.18□□□□□ -0.62
DDR1-252ENST00000504152 IGLV7-43P04211 117 aa11.18□□□□□ -0.62
DDR1-252ENST00000504152 IFITM1P13164 125 aa11.18□□□□□ -0.62
DDR1-252ENST00000504152 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
DDR1-252ENST00000504152 HNRNPA3P51991 378 aaKnown RBP11.17□□□□□ -0.62
DDR1-252ENST00000504152 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
DDR1-252ENST00000504152 SPINK6Q6UWN8 80 aa11.17□□□□□ -0.62
DDR1-252ENST00000504152 DLEU1O43261 78 aa11.16□□□□□ -0.62
DDR1-252ENST00000504152 C14orf144Q96I85 54 aa11.16□□□□□ -0.62
DDR1-252ENST00000504152 BCE1O60756 84 aa11.15□□□□□ -0.62
DDR1-252ENST00000504152 S100A12P80511 92 aa11.15□□□□□ -0.62
DDR1-252ENST00000504152 PPDPFQ9H3Y8 114 aa11.15□□□□□ -0.62
DDR1-252ENST00000504152 S100A7L2Q5SY68 101 aa11.14□□□□□ -0.63
DDR1-252ENST00000504152 REG3GQ6UW15 175 aa11.14□□□□□ -0.63
DDR1-252ENST00000504152 MUSTN1Q8IVN3 82 aa11.14□□□□□ -0.63
DDR1-252ENST00000504152 DDTP30046 118 aa11.13□□□□□ -0.63
DDR1-252ENST00000504152 SLC25A34Q6PIV7 304 aa11.13□□□□□ -0.63
DDR1-252ENST00000504152 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
DDR1-252ENST00000504152 TMEM126AQ9H061 195 aa11.13□□□□□ -0.63
DDR1-252ENST00000504152 DMBT1Q9UGM3 2413 aaPredicted RBP11.12□□□□□ -0.63
DDR1-252ENST00000504152 TRBV10-3A0A0K0K1G6 114 aa11.12□□□□□ -0.63
DDR1-252ENST00000504152 ZNF861PO60384 105 aa11.11□□□□□ -0.63
DDR1-252ENST00000504152 KCNQ1DNQ9H478 68 aa11.11□□□□□ -0.63
DDR1-252ENST00000504152 PRYO14603 147 aa11.1□□□□□ -0.63
DDR1-252ENST00000504152 RPL28P46779 137 aaKnown RBP11.1□□□□□ -0.63
DDR1-252ENST00000504152 UBE2AP49459 152 aa11.1□□□□□ -0.63
DDR1-252ENST00000504152 DIRC1Q969H9 104 aa11.1□□□□□ -0.63
DDR1-252ENST00000504152 PKHD1L1Q86WI1 4243 aa11.1□□□□□ -0.63
DDR1-252ENST00000504152 OR13C6PQ8NH95 151 aa11.09□□□□□ -0.63
DDR1-252ENST00000504152 HIST1H4GQ99525 98 aa11.09□□□□□ -0.63
DDR1-252ENST00000504152 CBY1Q9Y3M2 126 aa11.09□□□□□ -0.63
DDR1-252ENST00000504152 IGLV6-57P01721 117 aa11.08□□□□□ -0.64
DDR1-252ENST00000504152 FAM19A1Q7Z5A9 133 aa11.08□□□□□ -0.64
DDR1-252ENST00000504152 HIGD1BQ9P298 99 aa11.08□□□□□ -0.64
DDR1-252ENST00000504152 FLG2Q5D862 2391 aaPredicted RBP11.06□□□□□ -0.64
DDR1-252ENST00000504152 H0Y9J4 135 aa11.05□□□□□ -0.64
DDR1-252ENST00000504152 OXTP01178 125 aa11.05□□□□□ -0.64
DDR1-252ENST00000504152 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
DDR1-252ENST00000504152 ETDCA0A1B0GVM5 59 aa11.04□□□□□ -0.64
DDR1-252ENST00000504152 SPRR1AP35321 89 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms