RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 FP248Q71RG6 208 aaPredicted RBP1.97□□□□□ -2.09
NEDD4-204ENST00000503468 BPESC1Q9GZL8 116 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 TRBV6-8A0A0A6YYG3 113 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 COX17Q14061 63 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 ENHOQ6UWT2 76 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 CLEC19AQ6UXS0 136 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 WDFY3Q8IZQ1 3526 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 LY6G6DO95868 133 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 COX7BP24311 80 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 Q8N9W7 124 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 A0A087X002 238 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 PROK1P58294 105 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 UBR4Q5T4S7 5183 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-64A0A075B6Q5 118 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 TRBV7-4A0A0J9YYF1 115 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 CCL18P55774 89 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 Q6ZVQ6 151 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 KTN1-AS1Q86SY8 53 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 COX7B2Q8TF08 81 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 DEFB112Q30KQ8 113 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 OXLD1Q5BKU9 147 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-35A0A0C4DH35 117 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 K7EQG2 157 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 SPRY2O43597 315 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 APELAP0DMC3 54 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 GNLYP22749 145 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 LINC01547P58512 204 aaPredicted RBP1.96□□□□□ -2.1
NEDD4-204ENST00000503468 hDV103S1A0JD37 113 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV4-31P0DP07 118 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 NDPQ00604 133 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 CDSNQ15517 529 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 ZNRD1Q9P1U0 126 aa1.96□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3OR16-12A0A075B7B8 117 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 LINC00337Q8N6G1 96 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 SMIM11BQ8TCY0 68 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 ZNF469Q96JG9 3925 aaPredicted RBP1.95□□□□□ -2.1
NEDD4-204ENST00000503468 CSMD2Q7Z408 3487 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV4-28A0A0C4DH34 117 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 BPY2O14599 106 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 GNRH2O43555 120 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 Q8N814 137 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 FDCSPQ8NFU4 85 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 RETNQ9HD89 108 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 E7EQL1 145 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 INSP01308 110 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 PHF5AQ7RTV0 110 aaKnown RBP1.95□□□□□ -2.1
NEDD4-204ENST00000503468 Q8IZM0 81 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 Q9HAA7 133 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 SAA4P35542 130 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 DEFB119Q8N690 84 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 ATP6V0E1O15342 81 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 HIGD2BQ4VC39 106 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 BBC3Q96PG8 261 aaPredicted RBP1.95□□□□□ -2.1
NEDD4-204ENST00000503468 TOMM7Q9P0U1 55 aa1.95□□□□□ -2.1
NEDD4-204ENST00000503468 LCE6AA0A183 80 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 HILS1P60008 231 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 SS18Q15532 418 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 DIRC1Q969H9 104 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3OR16-13A0A075B7E8 117 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-74A0A0B4J1X5 117 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 HOXD3P31249 432 aaPredicted RBP1.94□□□□□ -2.1
NEDD4-204ENST00000503468 PRR9Q5T870 116 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 LYPD2Q6UXB3 125 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 SOSTDC1Q6X4U4 206 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 SPANXA2-OT1Q8N9U9 137 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV4-30-2A0A087WSY4 118 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3OR16-9A0A0B4J2B5 98 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 Q6ZQT0 140 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 PRR34Q9NV39 138 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 FAT4Q6V0I7 4981 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 ETDCA0A1B0GVM5 59 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 HCG22E2RYF7 251 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 LCA10Q71F78 164 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 RMI2Q96E14 147 aa1.94□□□□□ -2.1
NEDD4-204ENST00000503468 IGKV2-29A2NJV5 120 aaPredicted RBP1.93□□□□□ -2.1
NEDD4-204ENST00000503468 BSPH1Q075Z2 132 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 CHCHD7Q9BUK0 85 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 C11orf72Q8NBR9 251 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 NCR3O14931 201 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 LINC00575Q6W349 94 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 Q6ZSA8 131 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 NKAPP1Q8N9T2 125 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 FAM218AQ96MZ4 157 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 C22orf24Q9Y442 160 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 S4R3C0 116 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 TRGV2A0A075B6R0 118 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3-49A0A0A0MS15 119 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 FAM27E3Q08E93 113 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 C6orf99Q4VX62 202 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 WWC2-AS2Q96NR7 200 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 ASPMQ8IZT6 3477 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 PATE3B3GLJ2 98 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 OCR1Q9BZK8 76 aa1.93□□□□□ -2.1
NEDD4-204ENST00000503468 SMG1Q96Q15 3661 aaKnown RBP1.92□□□□□ -2.1
NEDD4-204ENST00000503468 KRTAP19-2Q3LHN2 52 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 KMT2AQ03164 3969 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 FRAS1Q86XX4 4008 aa1.92□□□□□ -2.1
NEDD4-204ENST00000503468 IGHV3OR16-8A0A075B7F1 116 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms