RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PLAC8Q9NZF1 115 aa12.67□□□□□ -0.38
CTSD-206ENST00000497544 PYY3Q5JQD4 70 aa12.66□□□□□ -0.38
CTSD-206ENST00000497544 A0A1W2PNN7 141 aa12.65□□□□□ -0.38
CTSD-206ENST00000497544 PCP2Q8IVA1 136 aa12.65□□□□□ -0.38
CTSD-206ENST00000497544 MIR7-3HGQ8N6C7 128 aa12.65□□□□□ -0.38
CTSD-206ENST00000497544 VAMP8Q9BV40 100 aa12.65□□□□□ -0.38
CTSD-206ENST00000497544 SND1-IT1Q9HBX3 110 aa12.65□□□□□ -0.38
CTSD-206ENST00000497544 FAM168BA1KXE4 195 aa12.63□□□□□ -0.39
CTSD-206ENST00000497544 PAM16Q9Y3D7 125 aa12.63□□□□□ -0.39
CTSD-206ENST00000497544 SCGB1D4Q6XE38 83 aa12.62□□□□□ -0.39
CTSD-206ENST00000497544 FAM19A5Q7Z5A7 132 aaPredicted RBP12.62□□□□□ -0.39
CTSD-206ENST00000497544 DNAH8Q96JB1 4490 aa12.61□□□□□ -0.39
CTSD-206ENST00000497544 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
CTSD-206ENST00000497544 SPATA45Q537H7 98 aa12.61□□□□□ -0.39
CTSD-206ENST00000497544 TIMM17BO60830 172 aa12.6□□□□□ -0.39
CTSD-206ENST00000497544 DAND5Q8N907 189 aa12.6□□□□□ -0.39
CTSD-206ENST00000497544 PLA2G2DQ9UNK4 145 aa12.59□□□□□ -0.39
CTSD-206ENST00000497544 ADAMTSL4-AS1Q5T5F5 129 aa12.58□□□□□ -0.4
CTSD-206ENST00000497544 SERTAD4-AS1Q5TG53 156 aa12.58□□□□□ -0.4
CTSD-206ENST00000497544 COX8AP10176 69 aa12.57□□□□□ -0.4
CTSD-206ENST00000497544 RPL24P83731 157 aaKnown RBP12.57□□□□□ -0.4
CTSD-206ENST00000497544 TMEM238C9JI98 176 aa12.56□□□□□ -0.4
CTSD-206ENST00000497544 M0QXV9 152 aa12.56□□□□□ -0.4
CTSD-206ENST00000497544 KRTAP7-1Q8IUC3 87 aa12.56□□□□□ -0.4
CTSD-206ENST00000497544 C7orf33Q8WU49 177 aa12.56□□□□□ -0.4
CTSD-206ENST00000497544 MIEN1Q9BRT3 115 aa12.56□□□□□ -0.4
CTSD-206ENST00000497544 S100A12P80511 92 aa12.55□□□□□ -0.4
CTSD-206ENST00000497544 PHF5AQ7RTV0 110 aaKnown RBP12.55□□□□□ -0.4
CTSD-206ENST00000497544 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
CTSD-206ENST00000497544 C14orf144Q96I85 54 aa12.55□□□□□ -0.4
CTSD-206ENST00000497544 LITAFQ99732 161 aa12.55□□□□□ -0.4
CTSD-206ENST00000497544 C22orf24Q9Y442 160 aa12.55□□□□□ -0.4
CTSD-206ENST00000497544 NPC2P61916 151 aa12.54□□□□□ -0.4
CTSD-206ENST00000497544 LINC00528Q8N1L1 170 aa12.54□□□□□ -0.4
CTSD-206ENST00000497544 NKAPP1Q8N9T2 125 aa12.54□□□□□ -0.4
CTSD-206ENST00000497544 LOC107984156A0A0G2JMH3 177 aa12.53□□□□□ -0.4
CTSD-206ENST00000497544 FAM229AH3BQW9 127 aa12.53□□□□□ -0.4
CTSD-206ENST00000497544 LBHQ53QV2 105 aaPredicted RBP12.53□□□□□ -0.4
CTSD-206ENST00000497544 ARL17AQ8IVW1 177 aa12.53□□□□□ -0.4
CTSD-206ENST00000497544 IGLV5-37A0A075B6J1 123 aa12.52□□□□□ -0.41
CTSD-206ENST00000497544 LOC105371267A0A1B0GV96 52 aa12.52□□□□□ -0.41
CTSD-206ENST00000497544 VPREB1P12018 145 aa12.52□□□□□ -0.41
CTSD-206ENST00000497544 TP73-AS1Q9UF72 201 aa12.52□□□□□ -0.41
CTSD-206ENST00000497544 DLEU1O43261 78 aa12.51□□□□□ -0.41
CTSD-206ENST00000497544 LINC00308Q8TCZ7 52 aa12.51□□□□□ -0.41
CTSD-206ENST00000497544 SPANXDQ9BXN6 97 aa12.51□□□□□ -0.41
CTSD-206ENST00000497544 SPANXCQ9NY87 97 aa12.51□□□□□ -0.41
CTSD-206ENST00000497544 RNF213Q63HN8 5207 aa12.5□□□□□ -0.41
CTSD-206ENST00000497544 UBE2BP63146 152 aa12.5□□□□□ -0.41
CTSD-206ENST00000497544 SLC25A34Q6PIV7 304 aa12.5□□□□□ -0.41
CTSD-206ENST00000497544 Q6ZVH6 145 aa12.5□□□□□ -0.41
CTSD-206ENST00000497544 MRPL55Q7Z7F7 128 aaKnown RBP12.5□□□□□ -0.41
CTSD-206ENST00000497544 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.41
CTSD-206ENST00000497544 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
CTSD-206ENST00000497544 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
CTSD-206ENST00000497544 Q8NDZ9 215 aa12.48□□□□□ -0.41
CTSD-206ENST00000497544 GAGE10A6NGK3 116 aa12.47□□□□□ -0.41
CTSD-206ENST00000497544 PLA2G1BP04054 148 aaKnown RBP12.47□□□□□ -0.41
CTSD-206ENST00000497544 IFITM1P13164 125 aa12.47□□□□□ -0.41
CTSD-206ENST00000497544 RPL37AP61513 92 aaKnown RBP12.47□□□□□ -0.41
CTSD-206ENST00000497544 LINC00167Q96N53 147 aa12.47□□□□□ -0.41
CTSD-206ENST00000497544 KRTAP29-1A8MX34 341 aaPredicted RBP12.46□□□□□ -0.41
CTSD-206ENST00000497544 M0R378 163 aa12.46□□□□□ -0.41
CTSD-206ENST00000497544 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
CTSD-206ENST00000497544 SMIM6P0DI80 62 aa12.46□□□□□ -0.41
CTSD-206ENST00000497544 PRR3P79522 188 aaKnown RBP12.46□□□□□ -0.41
CTSD-206ENST00000497544 SPANXB1Q9NS25 103 aaPredicted RBP12.46□□□□□ -0.41
CTSD-206ENST00000497544 NDUFC2O95298 119 aa12.45□□□□□ -0.42
CTSD-206ENST00000497544 RPL37AP8A6NKH3 93 aa12.44□□□□□ -0.42
CTSD-206ENST00000497544 NCR3O14931 201 aa12.44□□□□□ -0.42
CTSD-206ENST00000497544 MUSTN1Q8IVN3 82 aa12.44□□□□□ -0.42
CTSD-206ENST00000497544 HIST1H4GQ99525 98 aa12.42□□□□□ -0.42
CTSD-206ENST00000497544 HIGD1BQ9P298 99 aa12.42□□□□□ -0.42
CTSD-206ENST00000497544 LRP1Q07954 4544 aaKnown RBP12.41□□□□□ -0.42
CTSD-206ENST00000497544 KRTAP11-1Q8IUC1 163 aa12.41□□□□□ -0.42
CTSD-206ENST00000497544 PPDPFQ9H3Y8 114 aa12.41□□□□□ -0.42
CTSD-206ENST00000497544 PSORS1C2Q9UIG4 136 aa12.41□□□□□ -0.42
CTSD-206ENST00000497544 TRBV10-2A0A0K0K1G8 114 aa12.4□□□□□ -0.42
CTSD-206ENST00000497544 IGLV1-50A0A075B6I6 118 aa12.39□□□□□ -0.43
CTSD-206ENST00000497544 IGKV2-28A0A075B6P5 120 aa12.39□□□□□ -0.43
CTSD-206ENST00000497544 IGKV2D-28P01615 120 aa12.39□□□□□ -0.43
CTSD-206ENST00000497544 UQCR10Q9UDW1 63 aa12.39□□□□□ -0.43
CTSD-206ENST00000497544 C1orf137Q5JT78 98 aa12.38□□□□□ -0.43
CTSD-206ENST00000497544 LINC00518Q8N0U6 118 aa12.38□□□□□ -0.43
CTSD-206ENST00000497544 S100A7L2Q5SY68 101 aa12.37□□□□□ -0.43
CTSD-206ENST00000497544 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
CTSD-206ENST00000497544 TRBV10-3A0A0K0K1G6 114 aa12.35□□□□□ -0.43
CTSD-206ENST00000497544 DDTP30046 118 aa12.35□□□□□ -0.43
CTSD-206ENST00000497544 OR13C6PQ8NH95 151 aa12.35□□□□□ -0.43
CTSD-206ENST00000497544 C12orf57Q99622 126 aa12.34□□□□□ -0.43
CTSD-206ENST00000497544 PRO1933Q9H354 126 aa12.34□□□□□ -0.43
CTSD-206ENST00000497544 KRTAP10-4P60372 401 aaPredicted RBP12.33□□□□□ -0.44
CTSD-206ENST00000497544 TAL2Q16559 108 aa12.33□□□□□ -0.44
CTSD-206ENST00000497544 FAT3Q8TDW7 4589 aa12.32□□□□□ -0.44
CTSD-206ENST00000497544 A4D1N5 150 aa12.32□□□□□ -0.44
CTSD-206ENST00000497544 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
CTSD-206ENST00000497544 TMEM126AQ9H061 195 aa12.31□□□□□ -0.44
CTSD-206ENST00000497544 KCNQ1DNQ9H478 68 aa12.31□□□□□ -0.44
CTSD-206ENST00000497544 BCE1O60756 84 aa12.3□□□□□ -0.44
CTSD-206ENST00000497544 IGLV6-57P01721 117 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms