RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 C2orf82Q6UX34 121 aa6.06□□□□□ -1.44
SRSF4-205ENST00000497015 Q6ZRP5 223 aa6.06□□□□□ -1.44
SRSF4-205ENST00000497015 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
SRSF4-205ENST00000497015 C11orf86A6NJI1 115 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BKO60814 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BJP06899 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 SPINK8P0C7L1 97 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BOP23527 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BBP33778 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BDP58876 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BCP62807 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST2H2BEQ16778 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BHQ93079 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BNQ99877 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 HIST1H2BMQ99879 126 aa6.05□□□□□ -1.44
SRSF4-205ENST00000497015 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
SRSF4-205ENST00000497015 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
SRSF4-205ENST00000497015 C9orf116Q5BN46 136 aaPredicted RBP6.04□□□□□ -1.44
SRSF4-205ENST00000497015 COA6Q5JTJ3 125 aaKnown RBP6.04□□□□□ -1.44
SRSF4-205ENST00000497015 TMEM170BQ5T4T1 132 aa6.04□□□□□ -1.44
SRSF4-205ENST00000497015 TMEM223A0PJW6 202 aa6.03□□□□□ -1.44
SRSF4-205ENST00000497015 PLNP26678 52 aa6.03□□□□□ -1.44
SRSF4-205ENST00000497015 COX17Q14061 63 aa6.03□□□□□ -1.44
SRSF4-205ENST00000497015 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
SRSF4-205ENST00000497015 NUPR1O60356 82 aa6.02□□□□□ -1.45
SRSF4-205ENST00000497015 RPL24P83731 157 aaKnown RBP6.02□□□□□ -1.45
SRSF4-205ENST00000497015 IGLV5-37A0A075B6J1 123 aa6.01□□□□□ -1.45
SRSF4-205ENST00000497015 SEC61GP60059 68 aa6.01□□□□□ -1.45
SRSF4-205ENST00000497015 PRR3P79522 188 aaKnown RBP6.01□□□□□ -1.45
SRSF4-205ENST00000497015 MAP1LC3CQ9BXW4 147 aa6.01□□□□□ -1.45
SRSF4-205ENST00000497015 TP73-AS1Q9UF72 201 aa6.01□□□□□ -1.45
SRSF4-205ENST00000497015 FABP4P15090 132 aa6□□□□□ -1.45
SRSF4-205ENST00000497015 C9orf129Q5T035 196 aaKnown RBP6□□□□□ -1.45
SRSF4-205ENST00000497015 ZNF625Q96I27 306 aaPredicted RBP6□□□□□ -1.45
SRSF4-205ENST00000497015 LINC00587B1AMM8 73 aa5.99□□□□□ -1.45
SRSF4-205ENST00000497015 DPM2O94777 84 aa5.99□□□□□ -1.45
SRSF4-205ENST00000497015 SPINK6Q6UWN8 80 aa5.99□□□□□ -1.45
SRSF4-205ENST00000497015 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
SRSF4-205ENST00000497015 ERG28Q9UKR5 140 aa5.99□□□□□ -1.45
SRSF4-205ENST00000497015 M0QXV9 152 aa5.98□□□□□ -1.45
SRSF4-205ENST00000497015 IGKCP01834 107 aa5.98□□□□□ -1.45
SRSF4-205ENST00000497015 AKR1D1P51857 326 aa5.98□□□□□ -1.45
SRSF4-205ENST00000497015 HERVK_113P61574 105 aa5.98□□□□□ -1.45
SRSF4-205ENST00000497015 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
SRSF4-205ENST00000497015 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
SRSF4-205ENST00000497015 FAM168BA1KXE4 195 aa5.97□□□□□ -1.45
SRSF4-205ENST00000497015 SYS1-DBNDD2H3BUS1 97 aa5.97□□□□□ -1.45
SRSF4-205ENST00000497015 NMUP48645 174 aa5.97□□□□□ -1.45
SRSF4-205ENST00000497015 PHF5AQ7RTV0 110 aaKnown RBP5.97□□□□□ -1.45
SRSF4-205ENST00000497015 KRTAP7-1Q8IUC3 87 aa5.97□□□□□ -1.45
SRSF4-205ENST00000497015 PLEKHB2Q96CS7 222 aa5.97□□□□□ -1.45
SRSF4-205ENST00000497015 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 MYMXA0A1B0GTQ4 84 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 LEPROTO15243 131 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 LINC01545Q5VT33 79 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 LINC00518Q8N0U6 118 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 XAGE1AQ9HD64 81 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 PSORS1C2Q9UIG4 136 aa5.96□□□□□ -1.46
SRSF4-205ENST00000497015 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
SRSF4-205ENST00000497015 NDUFA12Q9UI09 145 aa5.95□□□□□ -1.46
SRSF4-205ENST00000497015 C22orf24Q9Y442 160 aa5.95□□□□□ -1.46
SRSF4-205ENST00000497015 E9PLD3 99 aa5.94□□□□□ -1.46
SRSF4-205ENST00000497015 J3QQQ9 107 aa5.94□□□□□ -1.46
SRSF4-205ENST00000497015 PFN2P35080 140 aa5.94□□□□□ -1.46
SRSF4-205ENST00000497015 UBE2BP63146 152 aa5.94□□□□□ -1.46
SRSF4-205ENST00000497015 MRPL55Q7Z7F7 128 aaKnown RBP5.94□□□□□ -1.46
SRSF4-205ENST00000497015 SND1-IT1Q9HBX3 110 aa5.94□□□□□ -1.46
SRSF4-205ENST00000497015 C3orf79P0CE67 100 aa5.93□□□□□ -1.46
SRSF4-205ENST00000497015 C1orf137Q5JT78 98 aa5.93□□□□□ -1.46
SRSF4-205ENST00000497015 Q6ZVQ6 151 aa5.93□□□□□ -1.46
SRSF4-205ENST00000497015 NKAPP1Q8N9T2 125 aa5.93□□□□□ -1.46
SRSF4-205ENST00000497015 IGLV9-49A0A0B4J1Y8 123 aa5.92□□□□□ -1.46
SRSF4-205ENST00000497015 C20orf202A1L168 122 aa5.92□□□□□ -1.46
SRSF4-205ENST00000497015 IGLV7-43P04211 117 aa5.92□□□□□ -1.46
SRSF4-205ENST00000497015 LGALS3P17931 250 aaKnown RBP5.92□□□□□ -1.46
SRSF4-205ENST00000497015 LINC00158P58513 81 aa5.92□□□□□ -1.46
SRSF4-205ENST00000497015 MEIG1Q5JSS6 88 aa5.92□□□□□ -1.46
SRSF4-205ENST00000497015 PMCHL2Q9BQD1 86 aa5.92□□□□□ -1.46
SRSF4-205ENST00000497015 LOC107984156A0A0G2JMH3 177 aa5.91□□□□□ -1.46
SRSF4-205ENST00000497015 ARL17AQ8IVW1 177 aa5.91□□□□□ -1.46
SRSF4-205ENST00000497015 S100A6P06703 90 aa5.9□□□□□ -1.46
SRSF4-205ENST00000497015 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
SRSF4-205ENST00000497015 TSPEAR-AS2P59090 65 aa5.9□□□□□ -1.46
SRSF4-205ENST00000497015 DIRC1Q969H9 104 aa5.9□□□□□ -1.46
SRSF4-205ENST00000497015 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
SRSF4-205ENST00000497015 IGKV2D-26A0A0A0MRZ7 120 aa5.89□□□□□ -1.47
SRSF4-205ENST00000497015 KRTDAPP60985 99 aa5.89□□□□□ -1.47
SRSF4-205ENST00000497015 KRTAP11-1Q8IUC1 163 aa5.89□□□□□ -1.47
SRSF4-205ENST00000497015 IGLV1-50A0A075B6I6 118 aa5.88□□□□□ -1.47
SRSF4-205ENST00000497015 ZNF861PO60384 105 aa5.88□□□□□ -1.47
SRSF4-205ENST00000497015 BCE1O60756 84 aa5.88□□□□□ -1.47
SRSF4-205ENST00000497015 S100A2P29034 98 aa5.88□□□□□ -1.47
SRSF4-205ENST00000497015 HIST3H2BBQ8N257 126 aa5.88□□□□□ -1.47
SRSF4-205ENST00000497015 MIR7-3HGQ8N6C7 128 aa5.88□□□□□ -1.47
SRSF4-205ENST00000497015 H0Y9J4 135 aa5.87□□□□□ -1.47
SRSF4-205ENST00000497015 M0R378 163 aa5.87□□□□□ -1.47
SRSF4-205ENST00000497015 TIMM17BO60830 172 aa5.87□□□□□ -1.47
SRSF4-205ENST00000497015 PRR4Q16378 134 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms