RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 PMCHL2Q9BQD1 86 aa9.76□□□□□ -0.85
DNMT3A-215ENST00000496570 H0Y9J4 135 aa9.75□□□□□ -0.85
DNMT3A-215ENST00000496570 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
DNMT3A-215ENST00000496570 PLNP26678 52 aa9.74□□□□□ -0.85
DNMT3A-215ENST00000496570 DIRC1Q969H9 104 aa9.74□□□□□ -0.85
DNMT3A-215ENST00000496570 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
DNMT3A-215ENST00000496570 DPM2O94777 84 aa9.73□□□□□ -0.85
DNMT3A-215ENST00000496570 KRTAP1-4P0C5Y4 121 aa9.73□□□□□ -0.85
DNMT3A-215ENST00000496570 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
DNMT3A-215ENST00000496570 A0A0U1RRA0 63 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 LEPROTO15243 131 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 ZNF861PO60384 105 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 IGKCP01834 107 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 SMIM13P0DJ93 91 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 LINC00158P58513 81 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 COA6Q5JTJ3 125 aaKnown RBP9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 NKAPP1Q8N9T2 125 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.86
DNMT3A-215ENST00000496570 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
DNMT3A-215ENST00000496570 SYS1-DBNDD2H3BUS1 97 aa9.69□□□□□ -0.86
DNMT3A-215ENST00000496570 BCE1O60756 84 aa9.69□□□□□ -0.86
DNMT3A-215ENST00000496570 HERV-K104P63124 156 aa9.69□□□□□ -0.86
DNMT3A-215ENST00000496570 KRTAP13-1Q8IUC0 172 aa9.69□□□□□ -0.86
DNMT3A-215ENST00000496570 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
DNMT3A-215ENST00000496570 IGKV2-28A0A075B6P5 120 aa9.67□□□□□ -0.86
DNMT3A-215ENST00000496570 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
DNMT3A-215ENST00000496570 J3QQQ9 107 aa9.67□□□□□ -0.86
DNMT3A-215ENST00000496570 IGKV2D-28P01615 120 aa9.67□□□□□ -0.86
DNMT3A-215ENST00000496570 MIR7-3HGQ8N6C7 128 aa9.67□□□□□ -0.86
DNMT3A-215ENST00000496570 RPL24P83731 157 aaKnown RBP9.66□□□□□ -0.86
DNMT3A-215ENST00000496570 MEIG1Q5JSS6 88 aa9.66□□□□□ -0.86
DNMT3A-215ENST00000496570 LINC01545Q5VT33 79 aa9.66□□□□□ -0.86
DNMT3A-215ENST00000496570 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
DNMT3A-215ENST00000496570 TMEM238C9JI98 176 aa9.64□□□□□ -0.87
DNMT3A-215ENST00000496570 HERVK_113P61574 105 aa9.64□□□□□ -0.87
DNMT3A-215ENST00000496570 E9PLD3 99 aa9.63□□□□□ -0.87
DNMT3A-215ENST00000496570 M0R378 163 aa9.63□□□□□ -0.87
DNMT3A-215ENST00000496570 C3orf79P0CE67 100 aa9.63□□□□□ -0.87
DNMT3A-215ENST00000496570 RPL28P46779 137 aaKnown RBP9.63□□□□□ -0.87
DNMT3A-215ENST00000496570 NMUP48645 174 aa9.63□□□□□ -0.87
DNMT3A-215ENST00000496570 PET117Q6UWS5 81 aa9.63□□□□□ -0.87
DNMT3A-215ENST00000496570 TMEM126AQ9H061 195 aa9.63□□□□□ -0.87
DNMT3A-215ENST00000496570 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
DNMT3A-215ENST00000496570 LINC00587B1AMM8 73 aa9.62□□□□□ -0.87
DNMT3A-215ENST00000496570 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
DNMT3A-215ENST00000496570 BOD1L2Q8IYS8 172 aa9.62□□□□□ -0.87
DNMT3A-215ENST00000496570 DAND5Q8N907 189 aa9.62□□□□□ -0.87
DNMT3A-215ENST00000496570 LGALS3P17931 250 aaKnown RBP9.61□□□□□ -0.87
DNMT3A-215ENST00000496570 A0A0J9YXY3 114 aa9.58□□□□□ -0.88
DNMT3A-215ENST00000496570 NCR3O14931 201 aa9.58□□□□□ -0.88
DNMT3A-215ENST00000496570 EIF4EBP3O60516 100 aaPredicted RBP9.58□□□□□ -0.88
DNMT3A-215ENST00000496570 UBE2AP49459 152 aa9.58□□□□□ -0.88
DNMT3A-215ENST00000496570 PRLHP81277 87 aa9.58□□□□□ -0.88
DNMT3A-215ENST00000496570 ADAMTSL4-AS1Q5T5F5 129 aa9.58□□□□□ -0.88
DNMT3A-215ENST00000496570 IGKV2D-26A0A0A0MRZ7 120 aa9.57□□□□□ -0.88
DNMT3A-215ENST00000496570 KRTDAPP60985 99 aa9.57□□□□□ -0.88
DNMT3A-215ENST00000496570 A0A087X002 238 aa9.56□□□□□ -0.88
DNMT3A-215ENST00000496570 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
DNMT3A-215ENST00000496570 FAM19A1Q7Z5A9 133 aa9.56□□□□□ -0.88
DNMT3A-215ENST00000496570 LITAFQ99732 161 aa9.56□□□□□ -0.88
DNMT3A-215ENST00000496570 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
DNMT3A-215ENST00000496570 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
DNMT3A-215ENST00000496570 KCNQ1DNQ9H478 68 aa9.55□□□□□ -0.88
DNMT3A-215ENST00000496570 ANAPC11Q9NYG5 84 aa9.55□□□□□ -0.88
DNMT3A-215ENST00000496570 TRBV10-3A0A0K0K1G6 114 aa9.54□□□□□ -0.88
DNMT3A-215ENST00000496570 KRTAP4-16G5E9R7 235 aaPredicted RBP9.54□□□□□ -0.88
DNMT3A-215ENST00000496570 SPRR1AP35321 89 aa9.54□□□□□ -0.88
DNMT3A-215ENST00000496570 LRP2P98164 4655 aa9.54□□□□□ -0.88
DNMT3A-215ENST00000496570 PRYO14603 147 aa9.53□□□□□ -0.88
DNMT3A-215ENST00000496570 RPL13AP40429 203 aaKnown RBP9.53□□□□□ -0.88
DNMT3A-215ENST00000496570 HIST3H2BBQ8N257 126 aa9.52□□□□□ -0.89
DNMT3A-215ENST00000496570 TRBV10-2A0A0K0K1G8 114 aa9.51□□□□□ -0.89
DNMT3A-215ENST00000496570 KRTAP13-2Q52LG2 175 aa9.51□□□□□ -0.89
DNMT3A-215ENST00000496570 NDUFC2O95298 119 aa9.5□□□□□ -0.89
DNMT3A-215ENST00000496570 NPC2P61916 151 aa9.5□□□□□ -0.89
DNMT3A-215ENST00000496570 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
DNMT3A-215ENST00000496570 ZNF815PA8K554 130 aa9.49□□□□□ -0.89
DNMT3A-215ENST00000496570 TIMM17BO60830 172 aa9.49□□□□□ -0.89
DNMT3A-215ENST00000496570 ATOH7Q8N100 152 aa9.49□□□□□ -0.89
DNMT3A-215ENST00000496570 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
DNMT3A-215ENST00000496570 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
DNMT3A-215ENST00000496570 SPANXB1Q9NS25 103 aaPredicted RBP9.49□□□□□ -0.89
DNMT3A-215ENST00000496570 IGLV6-57P01721 117 aa9.48□□□□□ -0.89
DNMT3A-215ENST00000496570 CRYGAP11844 174 aa9.48□□□□□ -0.89
DNMT3A-215ENST00000496570 DDTP30046 118 aa9.48□□□□□ -0.89
DNMT3A-215ENST00000496570 C20orf202A1L168 122 aa9.47□□□□□ -0.89
DNMT3A-215ENST00000496570 FAM229BQ4G0N7 80 aa9.47□□□□□ -0.89
DNMT3A-215ENST00000496570 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
DNMT3A-215ENST00000496570 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
DNMT3A-215ENST00000496570 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
DNMT3A-215ENST00000496570 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
DNMT3A-215ENST00000496570 B5MCH6 92 aa9.44□□□□□ -0.9
DNMT3A-215ENST00000496570 TYMSOSQ8TAI1 123 aa9.44□□□□□ -0.9
DNMT3A-215ENST00000496570 SPRR4Q96PI1 79 aa9.44□□□□□ -0.9
DNMT3A-215ENST00000496570 LPAP08519 4548 aa9.43□□□□□ -0.9
DNMT3A-215ENST00000496570 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
DNMT3A-215ENST00000496570 PCP2Q8IVA1 136 aa9.43□□□□□ -0.9
DNMT3A-215ENST00000496570 SPANXCQ9NY87 97 aa9.42□□□□□ -0.9
DNMT3A-215ENST00000496570 S100A2P29034 98 aa9.41□□□□□ -0.9
DNMT3A-215ENST00000496570 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms