RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	NOP10	Q9NPE3	64 aa	Known RBP	5.7	□□□□□ -1.5
CRNKL1-205	ENST00000496549	OCR1	Q9BZK8	76 aa		5.7	□□□□□ -1.5
CRNKL1-205	ENST00000496549	FLNC	Q14315	2725 aa		5.7	□□□□□ -1.5
CRNKL1-205	ENST00000496549	KMT2B	Q9UMN6	2715 aa	Predicted RBP	5.7	□□□□□ -1.5
CRNKL1-205	ENST00000496549	COL27A1	Q8IZC6	1860 aa	Predicted RBP	5.7	□□□□□ -1.5
CRNKL1-205	ENST00000496549	SETX	Q7Z333	2677 aa	Known RBP	5.69	□□□□□ -1.5
CRNKL1-205	ENST00000496549	LINC00959	A0A1B0GUT2	108 aa		5.69	□□□□□ -1.5
CRNKL1-205	ENST00000496549	ANG	P03950	147 aa	Known RBP	5.69	□□□□□ -1.5
CRNKL1-205	ENST00000496549	C9orf116	Q5BN46	136 aa	Predicted RBP	5.69	□□□□□ -1.5
CRNKL1-205	ENST00000496549	C8orf87	E5RJ46	101 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	C19orf84	I3L1E1	186 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	ELOF1	P60002	83 aa	Known RBP	5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	IGKV4-1	P06312	121 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549		A8MTW9	85 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	PRM2	P04554	102 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	DEFB114	Q30KQ6	69 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	DEFB112	Q30KQ8	113 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	LINC01356	Q8N9X3	169 aa		5.68	□□□□□ -1.5
CRNKL1-205	ENST00000496549	FAM104A	Q969W3	186 aa		5.67	□□□□□ -1.5
CRNKL1-205	ENST00000496549	IGLV10-54	A0A075B6I4	117 aa		5.67	□□□□□ -1.5
CRNKL1-205	ENST00000496549	CDC42SE1	Q9NRR8	79 aa		5.67	□□□□□ -1.5
CRNKL1-205	ENST00000496549	SPG11	Q96JI7	2443 aa		5.66	□□□□□ -1.5
CRNKL1-205	ENST00000496549	ADORA2A-AS1	P86434	159 aa		5.66	□□□□□ -1.5
CRNKL1-205	ENST00000496549	PHF5A	Q7RTV0	110 aa	Known RBP	5.66	□□□□□ -1.5
CRNKL1-205	ENST00000496549	C16orf90	A8MZG2	172 aa		5.66	□□□□□ -1.5
CRNKL1-205	ENST00000496549		M0R2N4	97 aa		5.66	□□□□□ -1.5
CRNKL1-205	ENST00000496549	KLK9	Q2XQG4	91 aa		5.66	□□□□□ -1.5
CRNKL1-205	ENST00000496549	WFDC13	Q8IUB5	93 aa		5.66	□□□□□ -1.5
CRNKL1-205	ENST00000496549	USP9X	Q93008	2570 aa	Predicted RBP	5.65	□□□□□ -1.5
CRNKL1-205	ENST00000496549	LOC101927531	A0A1B0GV80	90 aa		5.65	□□□□□ -1.5
CRNKL1-205	ENST00000496549	IGHV4-38-2	P0DP08	117 aa		5.65	□□□□□ -1.5
CRNKL1-205	ENST00000496549	C10orf25	Q5T742	122 aa		5.65	□□□□□ -1.5
CRNKL1-205	ENST00000496549	ZFP36	P26651	326 aa	Known RBP	5.65	□□□□□ -1.5
CRNKL1-205	ENST00000496549	WFDC10B	Q8IUB3	73 aa		5.65	□□□□□ -1.5
CRNKL1-205	ENST00000496549		Q5VV11	94 aa		5.65	□□□□□ -1.51
CRNKL1-205	ENST00000496549	IGLV4-60	A0A075B6I1	120 aa		5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549	DEFB130B	P0DP73	79 aa		5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549	DEFB130A	P0DP74	79 aa		5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549	KLK12	Q9UKR0	248 aa		5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549	HIVEP3	Q5T1R4	2406 aa		5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549	C16orf74	Q96GX8	76 aa		5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549	WNK1	Q9H4A3	2382 aa		5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549	CMC4	P56277	68 aa	Predicted RBP	5.64	□□□□□ -1.51
CRNKL1-205	ENST00000496549		A0A1B0GW54	56 aa		5.63	□□□□□ -1.51
CRNKL1-205	ENST00000496549	DNAJC9-AS1	A6NH13	148 aa		5.63	□□□□□ -1.51
CRNKL1-205	ENST00000496549	CCDC168	Q8NDH2	2452 aa		5.63	□□□□□ -1.51
CRNKL1-205	ENST00000496549	ANKHD1	Q8IWZ3	2542 aa	Known RBP	5.63	□□□□□ -1.51
CRNKL1-205	ENST00000496549	UTP20	O75691	2785 aa	Known RBP	5.63	□□□□□ -1.51
CRNKL1-205	ENST00000496549	IGFL3	Q6UXB1	125 aa		5.63	□□□□□ -1.51
CRNKL1-205	ENST00000496549	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.63	□□□□□ -1.51
CRNKL1-205	ENST00000496549	USP9Y	O00507	2555 aa	Predicted RBP	5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549	ABCA12	Q86UK0	2595 aa		5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549		H0Y9P7	68 aa		5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549	GYPE	P15421	78 aa		5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549	MAP1A	P78559	2803 aa	Predicted RBP	5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549		H3BPC8	53 aa		5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549		Q8NA96	180 aa		5.62	□□□□□ -1.51
CRNKL1-205	ENST00000496549	MAST4	O15021	2626 aa		5.61	□□□□□ -1.51
CRNKL1-205	ENST00000496549	LINC01554	Q52M75	96 aa		5.61	□□□□□ -1.51
CRNKL1-205	ENST00000496549	MAP6D1	Q9H9H5	199 aa		5.61	□□□□□ -1.51
CRNKL1-205	ENST00000496549	XAGE1A	Q9HD64	81 aa		5.61	□□□□□ -1.51
CRNKL1-205	ENST00000496549		Q75L30	129 aa		5.61	□□□□□ -1.51
CRNKL1-205	ENST00000496549	ADGRG4	Q8IZF6	3080 aa		5.61	□□□□□ -1.51
CRNKL1-205	ENST00000496549	CRYBG3	Q68DQ2	2970 aa		5.61	□□□□□ -1.51
CRNKL1-205	ENST00000496549		A0A096LPF7	62 aa		5.6	□□□□□ -1.51
CRNKL1-205	ENST00000496549	SPEN	Q96T58	3664 aa	Known RBP	5.6	□□□□□ -1.51
CRNKL1-205	ENST00000496549	POLQ	O75417	2590 aa		5.6	□□□□□ -1.51
CRNKL1-205	ENST00000496549	LOC100131303	A0A0U1RQF7	123 aa		5.6	□□□□□ -1.51
CRNKL1-205	ENST00000496549	CAMK2N2	Q96S95	79 aa		5.6	□□□□□ -1.51
CRNKL1-205	ENST00000496549	C1orf137	Q5JT78	98 aa		5.59	□□□□□ -1.51
CRNKL1-205	ENST00000496549	KPRP	Q5T749	579 aa	Predicted RBP	5.59	□□□□□ -1.51
CRNKL1-205	ENST00000496549		Q8N9P0	234 aa	Predicted RBP	5.59	□□□□□ -1.51
CRNKL1-205	ENST00000496549	REG3A	Q06141	175 aa		5.59	□□□□□ -1.51
CRNKL1-205	ENST00000496549	SPAG11A	Q6PDA7	123 aa		5.59	□□□□□ -1.51
CRNKL1-205	ENST00000496549	TENM4	Q6N022	2769 aa		5.59	□□□□□ -1.51
CRNKL1-205	ENST00000496549		A0A096LNT2	108 aa		5.58	□□□□□ -1.52
CRNKL1-205	ENST00000496549	OXLD1	Q5BKU9	147 aa		5.58	□□□□□ -1.52
CRNKL1-205	ENST00000496549	IGLV1-40	P01703	118 aa		5.58	□□□□□ -1.52
CRNKL1-205	ENST00000496549	RETNLB	Q9BQ08	111 aa		5.58	□□□□□ -1.52
CRNKL1-205	ENST00000496549		A6NDX4	124 aa		5.58	□□□□□ -1.52
CRNKL1-205	ENST00000496549	SLURP1	P55000	103 aa		5.58	□□□□□ -1.52
CRNKL1-205	ENST00000496549	SPANXA2-OT1	Q8N9U9	137 aa		5.58	□□□□□ -1.52
CRNKL1-205	ENST00000496549	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.57	□□□□□ -1.52
CRNKL1-205	ENST00000496549	COA5	Q86WW8	74 aa		5.57	□□□□□ -1.52
CRNKL1-205	ENST00000496549		Q9BRP9	147 aa		5.57	□□□□□ -1.52
CRNKL1-205	ENST00000496549		A0A0J9YWU9	116 aa		5.56	□□□□□ -1.52
CRNKL1-205	ENST00000496549	IGHV4-31	P0DP07	118 aa		5.56	□□□□□ -1.52
CRNKL1-205	ENST00000496549	CYSRT1	A8MQ03	144 aa		5.56	□□□□□ -1.52
CRNKL1-205	ENST00000496549	DHRS4-AS1	Q9P1J3	65 aa		5.56	□□□□□ -1.52
CRNKL1-205	ENST00000496549	BSN	Q9UPA5	3926 aa		5.55	□□□□□ -1.52
CRNKL1-205	ENST00000496549	IGLV6-57	P01721	117 aa		5.55	□□□□□ -1.52
CRNKL1-205	ENST00000496549	IGHV4-30-2	A0A087WSY4	118 aa		5.55	□□□□□ -1.52
CRNKL1-205	ENST00000496549	FSHB	P01225	129 aa		5.55	□□□□□ -1.52
CRNKL1-205	ENST00000496549	DEFB136	Q30KP8	78 aa		5.55	□□□□□ -1.52
CRNKL1-205	ENST00000496549		A6NN06	94 aa		5.55	□□□□□ -1.52
CRNKL1-205	ENST00000496549		A0A1B0GUV1	79 aa		5.54	□□□□□ -1.52
CRNKL1-205	ENST00000496549	DEFB116	Q30KQ4	102 aa		5.54	□□□□□ -1.52
CRNKL1-205	ENST00000496549	TEP1	Q99973	2627 aa	Known RBP	5.54	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 168 ms