RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 NUPR2A6NF83 97 aa14.18□□□□□ -0.14
FGFR1-223ENST00000496296 UPK3BQ9BT76 320 aa14.17□□□□□ -0.14
FGFR1-223ENST00000496296 SNCGO76070 127 aa14.16□□□□□ -0.14
FGFR1-223ENST00000496296 SPAG11BQ08648 103 aa14.16□□□□□ -0.14
FGFR1-223ENST00000496296 Q6Q795 121 aa14.16□□□□□ -0.14
FGFR1-223ENST00000496296 GVQW2A0A096LPI5 108 aaPredicted RBP14.15□□□□□ -0.14
FGFR1-223ENST00000496296 APLNQ9ULZ1 77 aa14.15□□□□□ -0.14
FGFR1-223ENST00000496296 ACYP1P07311 99 aa14.14□□□□□ -0.15
FGFR1-223ENST00000496296 BAALC-AS2P0C853 105 aa14.13□□□□□ -0.15
FGFR1-223ENST00000496296 C1orf43Q9BWL3 253 aa14.13□□□□□ -0.15
FGFR1-223ENST00000496296 C22orf24Q9Y442 160 aa14.13□□□□□ -0.15
FGFR1-223ENST00000496296 STAB2Q8WWQ8 2551 aa14.11□□□□□ -0.15
FGFR1-223ENST00000496296 GAGE2BQ13066 116 aa14.11□□□□□ -0.15
FGFR1-223ENST00000496296 GAGE2EQ4V326 116 aa14.11□□□□□ -0.15
FGFR1-223ENST00000496296 UBE2DNLQ8IWF7 75 aa14.11□□□□□ -0.15
FGFR1-223ENST00000496296 GAGE2DQ9UEU5 116 aa14.11□□□□□ -0.15
FGFR1-223ENST00000496296 KRTAP26-1Q6PEX3 210 aa14.1□□□□□ -0.15
FGFR1-223ENST00000496296 OR13C6PQ8NH95 151 aa14.1□□□□□ -0.15
FGFR1-223ENST00000496296 C10orf25Q5T742 122 aa14.1□□□□□ -0.15
FGFR1-223ENST00000496296 UNQ6190/PRO20217Q6UXQ8 127 aa14.1□□□□□ -0.15
FGFR1-223ENST00000496296 C9orf116Q5BN46 136 aaPredicted RBP14.09□□□□□ -0.15
FGFR1-223ENST00000496296 IGKV2D-24A0A075B6R9 120 aa14.08□□□□□ -0.16
FGFR1-223ENST00000496296 C6orf223Q8N319 242 aa14.08□□□□□ -0.16
FGFR1-223ENST00000496296 A0A087WYN8 130 aa14.08□□□□□ -0.16
FGFR1-223ENST00000496296 A0A1B0GX51 115 aa14.08□□□□□ -0.16
FGFR1-223ENST00000496296 TMEM126AQ9H061 195 aa14.08□□□□□ -0.16
FGFR1-223ENST00000496296 Q9HAA7 133 aa14.07□□□□□ -0.16
FGFR1-223ENST00000496296 RMI2Q96E14 147 aa14.06□□□□□ -0.16
FGFR1-223ENST00000496296 LINC00167Q96N53 147 aa14.06□□□□□ -0.16
FGFR1-223ENST00000496296 DNAL4O96015 105 aa14.05□□□□□ -0.16
FGFR1-223ENST00000496296 INAFM2P0DMQ5 153 aa14.04□□□□□ -0.16
FGFR1-223ENST00000496296 Q8NDZ9 215 aa14.03□□□□□ -0.16
FGFR1-223ENST00000496296 PRR3P79522 188 aaKnown RBP14.02□□□□□ -0.16
FGFR1-223ENST00000496296 ANAPC13Q9BS18 74 aa14.02□□□□□ -0.16
FGFR1-223ENST00000496296 C6orf48Q9UBA6 75 aa14.02□□□□□ -0.16
FGFR1-223ENST00000496296 TRBV7-7A0A0K0K1E9 115 aa14.01□□□□□ -0.17
FGFR1-223ENST00000496296 ZNF561-AS1K7EIQ3 104 aa14.01□□□□□ -0.17
FGFR1-223ENST00000496296 LECT2O14960 151 aa14.01□□□□□ -0.17
FGFR1-223ENST00000496296 OBSCN-AS1Q96MR7 158 aa14.01□□□□□ -0.17
FGFR1-223ENST00000496296 F8WDY8 70 aa14□□□□□ -0.17
FGFR1-223ENST00000496296 SDIM1Q6ZPB5 146 aa14□□□□□ -0.17
FGFR1-223ENST00000496296 NDUFV3P56181 108 aaKnown RBP13.99□□□□□ -0.17
FGFR1-223ENST00000496296 TTC32Q5I0X7 151 aa13.99□□□□□ -0.17
FGFR1-223ENST00000496296 LINC00526Q96FQ7 95 aa13.99□□□□□ -0.17
FGFR1-223ENST00000496296 C2orf48Q96LS8 159 aa13.99□□□□□ -0.17
FGFR1-223ENST00000496296 IMUPQ9GZP8 106 aa13.97□□□□□ -0.17
FGFR1-223ENST00000496296 IGLV6-57P01721 117 aa13.97□□□□□ -0.17
FGFR1-223ENST00000496296 C15orf56Q8N910 161 aa13.97□□□□□ -0.17
FGFR1-223ENST00000496296 DNAH7Q8WXX0 4024 aa13.96□□□□□ -0.17
FGFR1-223ENST00000496296 NCR3O14931 201 aa13.96□□□□□ -0.17
FGFR1-223ENST00000496296 HIGD2BQ4VC39 106 aa13.95□□□□□ -0.18
FGFR1-223ENST00000496296 LINC00643Q86TS7 51 aa13.95□□□□□ -0.18
FGFR1-223ENST00000496296 ORMDL1Q9P0S3 153 aa13.95□□□□□ -0.18
FGFR1-223ENST00000496296 Q8N814 137 aa13.94□□□□□ -0.18
FGFR1-223ENST00000496296 CAMK2N2Q96S95 79 aa13.94□□□□□ -0.18
FGFR1-223ENST00000496296 S100A7L2Q5SY68 101 aa13.93□□□□□ -0.18
FGFR1-223ENST00000496296 WWC2-AS2Q96NR7 200 aa13.93□□□□□ -0.18
FGFR1-223ENST00000496296 C6orf99Q4VX62 202 aa13.91□□□□□ -0.18
FGFR1-223ENST00000496296 SMCR5Q8TEV8 140 aa13.9□□□□□ -0.18
FGFR1-223ENST00000496296 LINC00575Q6W349 94 aa13.89□□□□□ -0.19
FGFR1-223ENST00000496296 KRTAP1-5Q9BYS1 174 aa13.89□□□□□ -0.19
FGFR1-223ENST00000496296 Q6ZRU5 148 aa13.89□□□□□ -0.19
FGFR1-223ENST00000496296 SLPIP03973 132 aa13.87□□□□□ -0.19
FGFR1-223ENST00000496296 RPL18AQ02543 176 aaKnown RBP13.87□□□□□ -0.19
FGFR1-223ENST00000496296 C9orf129Q5T035 196 aaKnown RBP13.87□□□□□ -0.19
FGFR1-223ENST00000496296 USP17L23D6RBM5 183 aa13.87□□□□□ -0.19
FGFR1-223ENST00000496296 CSMD3Q7Z407 3707 aa13.86□□□□□ -0.19
FGFR1-223ENST00000496296 NBDYA0A0U1RRE5 68 aa13.86□□□□□ -0.19
FGFR1-223ENST00000496296 NDUFC2-KCTD14E9PQ53 114 aa13.86□□□□□ -0.19
FGFR1-223ENST00000496296 TMEM256-PLSCR3K7ERE1 68 aa13.86□□□□□ -0.19
FGFR1-223ENST00000496296 VPREB1P12018 145 aa13.86□□□□□ -0.19
FGFR1-223ENST00000496296 GAGE2AQ6NT46 116 aa13.86□□□□□ -0.19
FGFR1-223ENST00000496296 PSCAO43653 123 aa13.85□□□□□ -0.19
FGFR1-223ENST00000496296 SYCNQ0VAF6 134 aa13.84□□□□□ -0.19
FGFR1-223ENST00000496296 CASC10Q5T4H9 136 aa13.84□□□□□ -0.19
FGFR1-223ENST00000496296 XAGE1AQ9HD64 81 aa13.84□□□□□ -0.19
FGFR1-223ENST00000496296 STARD9Q9P2P6 4700 aa13.84□□□□□ -0.19
FGFR1-223ENST00000496296 JMJD7-PLA2G4BH0Y9G9 81 aa13.83□□□□□ -0.2
FGFR1-223ENST00000496296 DYNC2H1Q8NCM8 4307 aaKnown RBP13.83□□□□□ -0.2
FGFR1-223ENST00000496296 TRBV7-6A0A0J9YX20 115 aa13.82□□□□□ -0.2
FGFR1-223ENST00000496296 TRBV10-3A0A0K0K1G6 114 aa13.82□□□□□ -0.2
FGFR1-223ENST00000496296 C14orf132Q9NPU4 83 aa13.82□□□□□ -0.2
FGFR1-223ENST00000496296 TRAV23DV6A0A075B6W5 121 aa13.81□□□□□ -0.2
FGFR1-223ENST00000496296 hADV29S1A0JD25 119 aa13.8□□□□□ -0.2
FGFR1-223ENST00000496296 H3BQ85 93 aa13.8□□□□□ -0.2
FGFR1-223ENST00000496296 M0R378 163 aa13.8□□□□□ -0.2
FGFR1-223ENST00000496296 DIRC1Q969H9 104 aa13.79□□□□□ -0.2
FGFR1-223ENST00000496296 TLX1NBP0CAT3 122 aa13.78□□□□□ -0.2
FGFR1-223ENST00000496296 ZNF73O43830 326 aaPredicted RBP13.76□□□□□ -0.21
FGFR1-223ENST00000496296 CCKP06307 115 aa13.76□□□□□ -0.21
FGFR1-223ENST00000496296 Q6ZRP5 223 aa13.76□□□□□ -0.21
FGFR1-223ENST00000496296 C3orf84H3BNL1 204 aa13.74□□□□□ -0.21
FGFR1-223ENST00000496296 ELOF1P60002 83 aaKnown RBP13.74□□□□□ -0.21
FGFR1-223ENST00000496296 C14orf177Q52M58 125 aa13.74□□□□□ -0.21
FGFR1-223ENST00000496296 FAM236AA0A1B0GUQ0 79 aa13.74□□□□□ -0.21
FGFR1-223ENST00000496296 FAM236BA0A1B0GV22 79 aa13.74□□□□□ -0.21
FGFR1-223ENST00000496296 CCDC179H3BU77 68 aa13.74□□□□□ -0.21
FGFR1-223ENST00000496296 TENM2Q9NT68 2774 aa13.73□□□□□ -0.21
FGFR1-223ENST00000496296 Q6JHZ5 121 aa13.73□□□□□ -0.21
FGFR1-223ENST00000496296 PLA2G2DQ9UNK4 145 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms