RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 SOSTDC1Q6X4U4 206 aa8.49□□□□□ -1.05
PTPN7-218ENST00000496197 FAM19A5Q7Z5A7 132 aaPredicted RBP8.49□□□□□ -1.05
PTPN7-218ENST00000496197 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
PTPN7-218ENST00000496197 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
PTPN7-218ENST00000496197 LINC00474Q9P2X8 69 aa8.49□□□□□ -1.05
PTPN7-218ENST00000496197 NPC2P61916 151 aa8.48□□□□□ -1.05
PTPN7-218ENST00000496197 HSPG2P98160 4391 aa8.47□□□□□ -1.05
PTPN7-218ENST00000496197 SCGB1D4Q6XE38 83 aa8.47□□□□□ -1.05
PTPN7-218ENST00000496197 RYR1P21817 5038 aa8.46□□□□□ -1.05
PTPN7-218ENST00000496197 TIMM17BO60830 172 aa8.46□□□□□ -1.05
PTPN7-218ENST00000496197 SMR3BP02814 79 aaPredicted RBP8.46□□□□□ -1.05
PTPN7-218ENST00000496197 LINC00587B1AMM8 73 aa8.45□□□□□ -1.06
PTPN7-218ENST00000496197 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
PTPN7-218ENST00000496197 SMIM6P0DI80 62 aa8.45□□□□□ -1.06
PTPN7-218ENST00000496197 VPREB1P12018 145 aa8.45□□□□□ -1.06
PTPN7-218ENST00000496197 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
PTPN7-218ENST00000496197 DLEU1O43261 78 aa8.44□□□□□ -1.06
PTPN7-218ENST00000496197 PRR3P79522 188 aaKnown RBP8.44□□□□□ -1.06
PTPN7-218ENST00000496197 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
PTPN7-218ENST00000496197 LOC107984156A0A0G2JMH3 177 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 M0QXV9 152 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 C2orf91Q6ZV80 131 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 ARL17AQ8IVW1 177 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 SPANXDQ9BXN6 97 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 C22orf24Q9Y442 160 aa8.43□□□□□ -1.06
PTPN7-218ENST00000496197 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
PTPN7-218ENST00000496197 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
PTPN7-218ENST00000496197 HERC2O95714 4834 aa8.41□□□□□ -1.06
PTPN7-218ENST00000496197 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
PTPN7-218ENST00000496197 S100A12P80511 92 aa8.4□□□□□ -1.06
PTPN7-218ENST00000496197 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-218ENST00000496197 GAGE10A6NGK3 116 aa8.39□□□□□ -1.07
PTPN7-218ENST00000496197 NCR3O14931 201 aa8.39□□□□□ -1.07
PTPN7-218ENST00000496197 MUSTN1Q8IVN3 82 aa8.39□□□□□ -1.07
PTPN7-218ENST00000496197 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
PTPN7-218ENST00000496197 PRO1933Q9H354 126 aa8.39□□□□□ -1.07
PTPN7-218ENST00000496197 MRPL55Q7Z7F7 128 aaKnown RBP8.38□□□□□ -1.07
PTPN7-218ENST00000496197 C7orf33Q8WU49 177 aa8.38□□□□□ -1.07
PTPN7-218ENST00000496197 LINC00167Q96N53 147 aa8.38□□□□□ -1.07
PTPN7-218ENST00000496197 C12orf57Q99622 126 aa8.38□□□□□ -1.07
PTPN7-218ENST00000496197 MIEN1Q9BRT3 115 aa8.38□□□□□ -1.07
PTPN7-218ENST00000496197 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
PTPN7-218ENST00000496197 NKAPP1Q8N9T2 125 aa8.38□□□□□ -1.07
PTPN7-218ENST00000496197 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
PTPN7-218ENST00000496197 RPL37AP8A6NKH3 93 aa8.37□□□□□ -1.07
PTPN7-218ENST00000496197 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
PTPN7-218ENST00000496197 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
PTPN7-218ENST00000496197 HIGD1BQ9P298 99 aa8.37□□□□□ -1.07
PTPN7-218ENST00000496197 FAT1Q14517 4588 aa8.37□□□□□ -1.07
PTPN7-218ENST00000496197 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTPN7-218ENST00000496197 NDUFC2O95298 119 aa8.35□□□□□ -1.07
PTPN7-218ENST00000496197 IFITM1P13164 125 aa8.35□□□□□ -1.07
PTPN7-218ENST00000496197 Q6ZVH6 145 aa8.35□□□□□ -1.07
PTPN7-218ENST00000496197 LINC00518Q8N0U6 118 aa8.35□□□□□ -1.07
PTPN7-218ENST00000496197 Q8N1X5 172 aa8.35□□□□□ -1.07
PTPN7-218ENST00000496197 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
PTPN7-218ENST00000496197 UBE2BP63146 152 aa8.34□□□□□ -1.07
PTPN7-218ENST00000496197 Q5VSD8 79 aa8.34□□□□□ -1.07
PTPN7-218ENST00000496197 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
PTPN7-218ENST00000496197 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
PTPN7-218ENST00000496197 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
PTPN7-218ENST00000496197 IGLV1-50A0A075B6I6 118 aa8.33□□□□□ -1.08
PTPN7-218ENST00000496197 M0R378 163 aa8.33□□□□□ -1.08
PTPN7-218ENST00000496197 PPDPFQ9H3Y8 114 aa8.33□□□□□ -1.08
PTPN7-218ENST00000496197 VPS13BQ7Z7G8 4022 aa8.33□□□□□ -1.08
PTPN7-218ENST00000496197 RPL37AP61513 92 aaKnown RBP8.32□□□□□ -1.08
PTPN7-218ENST00000496197 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
PTPN7-218ENST00000496197 LINC00337Q8N6G1 96 aa8.32□□□□□ -1.08
PTPN7-218ENST00000496197 TRBV10-3A0A0K0K1G6 114 aa8.32□□□□□ -1.08
PTPN7-218ENST00000496197 A4D1N5 150 aa8.32□□□□□ -1.08
PTPN7-218ENST00000496197 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
PTPN7-218ENST00000496197 HNRNPA3P51991 378 aaKnown RBP8.3□□□□□ -1.08
PTPN7-218ENST00000496197 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
PTPN7-218ENST00000496197 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
PTPN7-218ENST00000496197 DDTP30046 118 aa8.29□□□□□ -1.08
PTPN7-218ENST00000496197 C1orf137Q5JT78 98 aa8.29□□□□□ -1.08
PTPN7-218ENST00000496197 FXYD2P54710 66 aa8.28□□□□□ -1.08
PTPN7-218ENST00000496197 CEND1Q8N111 149 aa8.28□□□□□ -1.08
PTPN7-218ENST00000496197 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
PTPN7-218ENST00000496197 TAL2Q16559 108 aa8.27□□□□□ -1.09
PTPN7-218ENST00000496197 TMEM126AQ9H061 195 aa8.27□□□□□ -1.09
PTPN7-218ENST00000496197 HSD52Q0P140 79 aa8.26□□□□□ -1.09
PTPN7-218ENST00000496197 S100A7L2Q5SY68 101 aa8.26□□□□□ -1.09
PTPN7-218ENST00000496197 KCNQ1DNQ9H478 68 aa8.26□□□□□ -1.09
PTPN7-218ENST00000496197 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
PTPN7-218ENST00000496197 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
PTPN7-218ENST00000496197 REG3GQ6UW15 175 aa8.26□□□□□ -1.09
PTPN7-218ENST00000496197 OR13C6PQ8NH95 151 aa8.26□□□□□ -1.09
PTPN7-218ENST00000496197 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
PTPN7-218ENST00000496197 PRYO14603 147 aa8.25□□□□□ -1.09
PTPN7-218ENST00000496197 CFC1BP0CG36 223 aa8.25□□□□□ -1.09
PTPN7-218ENST00000496197 CFC1P0CG37 223 aa8.25□□□□□ -1.09
PTPN7-218ENST00000496197 SPRR1AP35321 89 aa8.25□□□□□ -1.09
PTPN7-218ENST00000496197 SRRM2Q9UQ35 2752 aaKnown RBP8.24□□□□□ -1.09
PTPN7-218ENST00000496197 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
PTPN7-218ENST00000496197 BCE1O60756 84 aa8.24□□□□□ -1.09
PTPN7-218ENST00000496197 IGLV7-43P04211 117 aa8.24□□□□□ -1.09
PTPN7-218ENST00000496197 CTAG1AP78358 180 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms