RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 H3BRN7 92 aa1.58□□□□□ -2.16
NCKAP1-208ENST00000495619 COX17Q14061 63 aa1.58□□□□□ -2.16
NCKAP1-208ENST00000495619 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
NCKAP1-208ENST00000495619 LINC00322Q6ZN03 302 aaPredicted RBP1.58□□□□□ -2.16
NCKAP1-208ENST00000495619 C5orf56Q8N8D9 126 aa1.58□□□□□ -2.16
NCKAP1-208ENST00000495619 C5P01031 1676 aa1.58□□□□□ -2.16
NCKAP1-208ENST00000495619 INTS1Q8N201 2190 aaKnown RBP1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 TRGV1A0A0A0MS02 117 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 TRAV1-2A0A0B4J238 106 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 TRBV6-1A0A0K0K1D8 114 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 SMIM27A0A1W2PRY6 76 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 CAV3P56539 151 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 FXYD4P59646 89 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 GAFA1Q96PS6 74 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 NRXN3Q9Y4C0 1643 aa1.57□□□□□ -2.16
NCKAP1-208ENST00000495619 SLIT1O75093 1534 aa1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 ABCC8Q09428 1581 aa1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 NCOA6Q14686 2063 aaPredicted RBP1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 TRGV2A0A075B6R0 118 aa1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 LCE6AA0A183 80 aa1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 PLNP26678 52 aa1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 DEFB112Q30KQ8 113 aa1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 OBSCN-AS1Q96MR7 158 aa1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 FN1P02751 2386 aaKnown RBP1.56□□□□□ -2.16
NCKAP1-208ENST00000495619 SDK1Q7Z5N4 2213 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 LY75O60449 1722 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 NRAPQ86VF7 1730 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 LOC110117498A0A087WWA1 95 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 ACYP2P14621 99 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 SERF2P84101 59 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 DEFB119Q8N690 84 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 Q96NJ1 140 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 LINC00472Q9H8W2 130 aa1.55□□□□□ -2.16
NCKAP1-208ENST00000495619 DOT1LQ8TEK3 1739 aa1.54□□□□□ -2.16
NCKAP1-208ENST00000495619 SNRPGP62308 76 aaKnown RBP1.54□□□□□ -2.16
NCKAP1-208ENST00000495619 MROH2BQ7Z745 1585 aa1.54□□□□□ -2.16
NCKAP1-208ENST00000495619 M0R1W7 72 aa1.53□□□□□ -2.16
NCKAP1-208ENST00000495619 INE1O15225 51 aa1.53□□□□□ -2.16
NCKAP1-208ENST00000495619 KIF21BO75037 1637 aa1.53□□□□□ -2.16
NCKAP1-208ENST00000495619 Q6ZSA8 131 aa1.53□□□□□ -2.16
NCKAP1-208ENST00000495619 ZNF625Q96I27 306 aaPredicted RBP1.53□□□□□ -2.16
NCKAP1-208ENST00000495619 TIMM8BQ9Y5J9 83 aaPredicted RBP1.53□□□□□ -2.16
NCKAP1-208ENST00000495619 ATP7AQ04656 1500 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 KMT2BQ9UMN6 2715 aaPredicted RBP1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 A0A1B0GU69 56 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 LINC00959A0A1B0GUT2 108 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 I3L3M4 83 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 M0R2N4 97 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 NDUFA4O00483 81 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 COA5Q86WW8 74 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 ALPK2Q86TB3 2170 aa1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 DDX60LQ5H9U9 1706 aaKnown RBP1.52□□□□□ -2.17
NCKAP1-208ENST00000495619 IGIPA6NJ69 53 aa1.51□□□□□ -2.17
NCKAP1-208ENST00000495619 SPINK4O60575 86 aa1.51□□□□□ -2.17
NCKAP1-208ENST00000495619 BRWD1Q9NSI6 2320 aa1.51□□□□□ -2.17
NCKAP1-208ENST00000495619 QSER1Q2KHR3 1735 aa1.51□□□□□ -2.17
NCKAP1-208ENST00000495619 IQGAP1P46940 1657 aa1.51□□□□□ -2.17
NCKAP1-208ENST00000495619 DEPDC5O75140 1603 aa1.51□□□□□ -2.17
NCKAP1-208ENST00000495619 TULP4Q9NRJ4 1543 aa1.5□□□□□ -2.17
NCKAP1-208ENST00000495619 FREM1Q5H8C1 2179 aa1.5□□□□□ -2.17
NCKAP1-208ENST00000495619 LINC01546A6NGU7 62 aa1.5□□□□□ -2.17
NCKAP1-208ENST00000495619 COX6B1P14854 86 aa1.5□□□□□ -2.17
NCKAP1-208ENST00000495619 COX7BP24311 80 aa1.5□□□□□ -2.17
NCKAP1-208ENST00000495619 Q6ZQY7 126 aa1.5□□□□□ -2.17
NCKAP1-208ENST00000495619 CCL19Q99731 98 aa1.5□□□□□ -2.17
NCKAP1-208ENST00000495619 HAMPP81172 84 aa1.49□□□□□ -2.17
NCKAP1-208ENST00000495619 RTTNQ86VV8 2226 aa1.48□□□□□ -2.17
NCKAP1-208ENST00000495619 CLTCL1P53675 1640 aa1.48□□□□□ -2.17
NCKAP1-208ENST00000495619 NCR3O14931 201 aa1.48□□□□□ -2.17
NCKAP1-208ENST00000495619 FXYD6P3P58550 94 aa1.48□□□□□ -2.17
NCKAP1-208ENST00000495619 DEFB114Q30KQ6 69 aa1.48□□□□□ -2.17
NCKAP1-208ENST00000495619 DDX60Q8IY21 1712 aaKnown RBP1.48□□□□□ -2.17
NCKAP1-208ENST00000495619 ZFHX3Q15911 3703 aa1.48□□□□□ -2.17
NCKAP1-208ENST00000495619 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
NCKAP1-208ENST00000495619 NDUFA3O95167 84 aa1.47□□□□□ -2.17
NCKAP1-208ENST00000495619 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.47□□□□□ -2.17
NCKAP1-208ENST00000495619 Q6ZRX8 168 aa1.47□□□□□ -2.17
NCKAP1-208ENST00000495619 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
NCKAP1-208ENST00000495619 SAMD9LQ8IVG5 1584 aa1.47□□□□□ -2.17
NCKAP1-208ENST00000495619 LRRC37A2A6NM11 1700 aa1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 RP1L1Q8IWN7 2480 aaPredicted RBP1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 E9PCH4 1651 aa1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 MED13LQ71F56 2210 aa1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 H0YGX0 51 aa1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 ANGP03950 147 aaKnown RBP1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 RPL38P63173 70 aaKnown RBP1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 Q6ZRN7 208 aaPredicted RBP1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 KCNQ1DNQ9H478 68 aa1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 TNCP24821 2201 aa1.46□□□□□ -2.18
NCKAP1-208ENST00000495619 G3V318 75 aa1.45□□□□□ -2.18
NCKAP1-208ENST00000495619 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
NCKAP1-208ENST00000495619 C4AP0C0L4 1744 aa1.45□□□□□ -2.18
NCKAP1-208ENST00000495619 GVQW2A0A096LPI5 108 aaPredicted RBP1.44□□□□□ -2.18
NCKAP1-208ENST00000495619 CPSF4LA6NMK7 179 aaKnown RBP1.44□□□□□ -2.18
NCKAP1-208ENST00000495619 C10orf99Q6UWK7 81 aa1.44□□□□□ -2.18
NCKAP1-208ENST00000495619 TOGARAM1Q9Y4F4 1720 aa1.43□□□□□ -2.18
NCKAP1-208ENST00000495619 F5P12259 2224 aa1.43□□□□□ -2.18
NCKAP1-208ENST00000495619 GCC2Q8IWJ2 1684 aa1.43□□□□□ -2.18
NCKAP1-208ENST00000495619 PIN1P1O15428 100 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms