RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 RBM3P98179 157 aaKnown RBP10.42□□□□□ -0.74
SDF4-207ENST00000494748 C10orf25Q5T742 122 aa10.41□□□□□ -0.74
SDF4-207ENST00000494748 BCE1O60756 84 aa10.41□□□□□ -0.74
SDF4-207ENST00000494748 HRCT1Q6UXD1 115 aa10.41□□□□□ -0.74
SDF4-207ENST00000494748 TRAV10A0A0B4J240 114 aa10.4□□□□□ -0.74
SDF4-207ENST00000494748 IGLV6-57P01721 117 aa10.4□□□□□ -0.74
SDF4-207ENST00000494748 Q6ZVQ6 151 aa10.4□□□□□ -0.74
SDF4-207ENST00000494748 X6R8D5 127 aa10.4□□□□□ -0.74
SDF4-207ENST00000494748 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
SDF4-207ENST00000494748 TRAV7A0A075B6U4 112 aa10.4□□□□□ -0.74
SDF4-207ENST00000494748 C9orf66Q5T8R8 295 aa10.39□□□□□ -0.75
SDF4-207ENST00000494748 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
SDF4-207ENST00000494748 FAM236DA0A1B0GTK5 79 aa10.38□□□□□ -0.75
SDF4-207ENST00000494748 FAM236CP0DP71 79 aa10.38□□□□□ -0.75
SDF4-207ENST00000494748 PRO0255Q9UI72 69 aa10.38□□□□□ -0.75
SDF4-207ENST00000494748 KLKP1Q107X0 134 aa10.38□□□□□ -0.75
SDF4-207ENST00000494748 ZNF843Q8N446 348 aa10.38□□□□□ -0.75
SDF4-207ENST00000494748 REG3AQ06141 175 aa10.37□□□□□ -0.75
SDF4-207ENST00000494748 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
SDF4-207ENST00000494748 Q6ZQY7 126 aa10.35□□□□□ -0.75
SDF4-207ENST00000494748 C16orf95Q9H693 158 aa10.35□□□□□ -0.75
SDF4-207ENST00000494748 LAMTOR3Q9UHA4 124 aa10.34□□□□□ -0.75
SDF4-207ENST00000494748 FLNAP21333 2647 aaKnown RBP10.34□□□□□ -0.75
SDF4-207ENST00000494748 A0A0J9YWU9 116 aa10.34□□□□□ -0.75
SDF4-207ENST00000494748 IGHV4-30-4P0DP06 118 aa10.34□□□□□ -0.75
SDF4-207ENST00000494748 CXCL6P80162 114 aa10.34□□□□□ -0.75
SDF4-207ENST00000494748 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
SDF4-207ENST00000494748 SERP1Q9Y6X1 66 aa10.33□□□□□ -0.76
SDF4-207ENST00000494748 MUC7Q8TAX7 377 aa10.33□□□□□ -0.76
SDF4-207ENST00000494748 TRBV7-4A0A0J9YYF1 115 aa10.32□□□□□ -0.76
SDF4-207ENST00000494748 HAMPP81172 84 aa10.32□□□□□ -0.76
SDF4-207ENST00000494748 RMI2Q96E14 147 aa10.32□□□□□ -0.76
SDF4-207ENST00000494748 CYSRT1A8MQ03 144 aa10.31□□□□□ -0.76
SDF4-207ENST00000494748 SNURFQ9Y675 71 aa10.31□□□□□ -0.76
SDF4-207ENST00000494748 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
SDF4-207ENST00000494748 VWFP04275 2813 aa10.3□□□□□ -0.76
SDF4-207ENST00000494748 WFDC11Q8NEX6 87 aa10.29□□□□□ -0.76
SDF4-207ENST00000494748 TM2D3Q9BRN9 247 aa10.29□□□□□ -0.76
SDF4-207ENST00000494748 PDE6GP18545 87 aa10.28□□□□□ -0.76
SDF4-207ENST00000494748 KRTAP1-1Q07627 177 aa10.28□□□□□ -0.76
SDF4-207ENST00000494748 GVQW2A0A096LPI5 108 aaPredicted RBP10.27□□□□□ -0.77
SDF4-207ENST00000494748 FP248Q71RG6 208 aaPredicted RBP10.27□□□□□ -0.77
SDF4-207ENST00000494748 C6orf48Q9UBA6 75 aa10.27□□□□□ -0.77
SDF4-207ENST00000494748 F8WEM9 126 aa10.26□□□□□ -0.77
SDF4-207ENST00000494748 SCXQ7RTU7 201 aa10.26□□□□□ -0.77
SDF4-207ENST00000494748 PRR34Q9NV39 138 aa10.26□□□□□ -0.77
SDF4-207ENST00000494748 TRBV7-6A0A0J9YX20 115 aa10.26□□□□□ -0.77
SDF4-207ENST00000494748 LYRM9A8MSI8 78 aa10.26□□□□□ -0.77
SDF4-207ENST00000494748 PDZD2O15018 2839 aa10.26□□□□□ -0.77
SDF4-207ENST00000494748 DEFB4AO15263 64 aa10.25□□□□□ -0.77
SDF4-207ENST00000494748 KRTAP10-3P60369 221 aa10.25□□□□□ -0.77
SDF4-207ENST00000494748 H3BQ85 93 aa10.25□□□□□ -0.77
SDF4-207ENST00000494748 ELOF1P60002 83 aaKnown RBP10.25□□□□□ -0.77
SDF4-207ENST00000494748 USP24Q9UPU5 2620 aa10.25□□□□□ -0.77
SDF4-207ENST00000494748 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
SDF4-207ENST00000494748 DIRC1Q969H9 104 aa10.24□□□□□ -0.77
SDF4-207ENST00000494748 XAGE1AQ9HD64 81 aa10.23□□□□□ -0.77
SDF4-207ENST00000494748 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
SDF4-207ENST00000494748 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
SDF4-207ENST00000494748 HTN3P15516 51 aa10.22□□□□□ -0.77
SDF4-207ENST00000494748 LINC00336Q6ZUF6 198 aa10.22□□□□□ -0.77
SDF4-207ENST00000494748 COX7BP24311 80 aa10.21□□□□□ -0.78
SDF4-207ENST00000494748 C1orf43Q9BWL3 253 aa10.2□□□□□ -0.78
SDF4-207ENST00000494748 VPREB1P12018 145 aa10.2□□□□□ -0.78
SDF4-207ENST00000494748 LELP1Q5T871 98 aa10.19□□□□□ -0.78
SDF4-207ENST00000494748 KLK12Q9UKR0 248 aa10.19□□□□□ -0.78
SDF4-207ENST00000494748 NREPQ16612 68 aa10.19□□□□□ -0.78
SDF4-207ENST00000494748 DEFB135Q30KP9 77 aa10.19□□□□□ -0.78
SDF4-207ENST00000494748 IGKV4-1P06312 121 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 LINC00528Q8N1L1 170 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 PKIGQ9Y2B9 76 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 SMIM26A0A096LP01 95 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 NDUFC1O43677 76 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 MIFP14174 115 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 Q8NAQ8 132 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
SDF4-207ENST00000494748 BPY2O14599 106 aa10.16□□□□□ -0.78
SDF4-207ENST00000494748 Q8N9L7 120 aa10.16□□□□□ -0.78
SDF4-207ENST00000494748 DAD1P61803 113 aa10.16□□□□□ -0.78
SDF4-207ENST00000494748 ERC2-IT1O76042 136 aa10.15□□□□□ -0.78
SDF4-207ENST00000494748 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.78
SDF4-207ENST00000494748 TMEM254Q8TBM7 123 aa10.15□□□□□ -0.78
SDF4-207ENST00000494748 HIVEP1P15822 2718 aa10.15□□□□□ -0.79
SDF4-207ENST00000494748 OCR1Q9BZK8 76 aa10.15□□□□□ -0.79
SDF4-207ENST00000494748 UNC79Q9P2D8 2635 aa10.14□□□□□ -0.79
SDF4-207ENST00000494748 FASNP49327 2511 aaKnown RBP10.14□□□□□ -0.79
SDF4-207ENST00000494748 PRO0628Q9UI54 55 aa10.14□□□□□ -0.79
SDF4-207ENST00000494748 TENM4Q6N022 2769 aa10.13□□□□□ -0.79
SDF4-207ENST00000494748 FAM229BQ4G0N7 80 aa10.12□□□□□ -0.79
SDF4-207ENST00000494748 A0A0U1RQV1 116 aa10.12□□□□□ -0.79
SDF4-207ENST00000494748 ATP5EP56381 51 aaPredicted RBP10.11□□□□□ -0.79
SDF4-207ENST00000494748 M0R378 163 aa10.1□□□□□ -0.79
SDF4-207ENST00000494748 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
SDF4-207ENST00000494748 Q6ZRU5 148 aa10.09□□□□□ -0.79
SDF4-207ENST00000494748 ATRQ13535 2644 aa10.09□□□□□ -0.79
SDF4-207ENST00000494748 C15orf56Q8N910 161 aa10.09□□□□□ -0.79
SDF4-207ENST00000494748 EGFEM1PQ0D2K5 195 aa10.08□□□□□ -0.8
SDF4-207ENST00000494748 TENM1Q9UKZ4 2725 aa10.07□□□□□ -0.8
SDF4-207ENST00000494748 PRB2P02812 416 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms