RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 NKAPP1Q8N9T2 125 aa6.82□□□□□ -1.32
VTI1A-208ENST00000494728 ZNF625Q96I27 306 aaPredicted RBP6.82□□□□□ -1.32
VTI1A-208ENST00000494728 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
VTI1A-208ENST00000494728 SND1-IT1Q9HBX3 110 aa6.82□□□□□ -1.32
VTI1A-208ENST00000494728 MUC17Q685J3 4493 aa6.81□□□□□ -1.32
VTI1A-208ENST00000494728 TMEM238C9JI98 176 aa6.81□□□□□ -1.32
VTI1A-208ENST00000494728 HBDP02042 147 aa6.81□□□□□ -1.32
VTI1A-208ENST00000494728 ERG28Q9UKR5 140 aa6.81□□□□□ -1.32
VTI1A-208ENST00000494728 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
VTI1A-208ENST00000494728 LINC00614P0C842 121 aa6.8□□□□□ -1.32
VTI1A-208ENST00000494728 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
VTI1A-208ENST00000494728 CRYGAP11844 174 aa6.79□□□□□ -1.32
VTI1A-208ENST00000494728 UBE2AP49459 152 aa6.79□□□□□ -1.32
VTI1A-208ENST00000494728 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
VTI1A-208ENST00000494728 M0R378 163 aa6.78□□□□□ -1.32
VTI1A-208ENST00000494728 BAGE3Q86Y29 109 aa6.78□□□□□ -1.32
VTI1A-208ENST00000494728 RETNLBQ9BQ08 111 aa6.78□□□□□ -1.32
VTI1A-208ENST00000494728 FAT4Q6V0I7 4981 aa6.78□□□□□ -1.32
VTI1A-208ENST00000494728 KRTAP9-6A0A140TA67 174 aa6.77□□□□□ -1.33
VTI1A-208ENST00000494728 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
VTI1A-208ENST00000494728 TRGC2P03986 189 aa6.76□□□□□ -1.33
VTI1A-208ENST00000494728 A0A0U1RRA0 63 aa6.75□□□□□ -1.33
VTI1A-208ENST00000494728 COX17Q14061 63 aa6.75□□□□□ -1.33
VTI1A-208ENST00000494728 FAM229BQ4G0N7 80 aa6.75□□□□□ -1.33
VTI1A-208ENST00000494728 FAM19A1Q7Z5A9 133 aa6.75□□□□□ -1.33
VTI1A-208ENST00000494728 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
VTI1A-208ENST00000494728 C3orf22Q8N5N4 141 aa6.74□□□□□ -1.33
VTI1A-208ENST00000494728 LINC00304Q8N9R0 145 aa6.74□□□□□ -1.33
VTI1A-208ENST00000494728 CHTOPQ9Y3Y2 248 aaKnown RBP6.74□□□□□ -1.33
VTI1A-208ENST00000494728 COLCA2A8K830 154 aa6.73□□□□□ -1.33
VTI1A-208ENST00000494728 CHCHD1Q96BP2 118 aaKnown RBP6.73□□□□□ -1.33
VTI1A-208ENST00000494728 HSBP1O75506 76 aa6.72□□□□□ -1.33
VTI1A-208ENST00000494728 RPL24P83731 157 aaKnown RBP6.72□□□□□ -1.33
VTI1A-208ENST00000494728 PLEKHB2Q96CS7 222 aa6.72□□□□□ -1.33
VTI1A-208ENST00000494728 TRAV12-1A0A0B4J245 112 aa6.71□□□□□ -1.34
VTI1A-208ENST00000494728 SMIM13P0DJ93 91 aa6.71□□□□□ -1.34
VTI1A-208ENST00000494728 LINC00158P58513 81 aa6.71□□□□□ -1.34
VTI1A-208ENST00000494728 IFI27L1Q96BM0 104 aa6.71□□□□□ -1.34
VTI1A-208ENST00000494728 SERF1AO75920 110 aa6.7□□□□□ -1.34
VTI1A-208ENST00000494728 LINC00310P59036 64 aa6.7□□□□□ -1.34
VTI1A-208ENST00000494728 TSPEAR-AS2P59090 65 aa6.7□□□□□ -1.34
VTI1A-208ENST00000494728 FAM19A2Q8N3H0 131 aa6.7□□□□□ -1.34
VTI1A-208ENST00000494728 HIGD2AQ9BW72 106 aa6.7□□□□□ -1.34
VTI1A-208ENST00000494728 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
VTI1A-208ENST00000494728 NCR3O14931 201 aa6.69□□□□□ -1.34
VTI1A-208ENST00000494728 SFTA2Q6UW10 78 aa6.69□□□□□ -1.34
VTI1A-208ENST00000494728 SPRR4Q96PI1 79 aa6.69□□□□□ -1.34
VTI1A-208ENST00000494728 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
VTI1A-208ENST00000494728 MIR7-3HGQ8N6C7 128 aa6.68□□□□□ -1.34
VTI1A-208ENST00000494728 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
VTI1A-208ENST00000494728 H0Y8G0 127 aa6.67□□□□□ -1.34
VTI1A-208ENST00000494728 BOD1L2Q8IYS8 172 aa6.67□□□□□ -1.34
VTI1A-208ENST00000494728 SPRR1AP35321 89 aa6.66□□□□□ -1.34
VTI1A-208ENST00000494728 TPRXLQ17RH7 258 aa6.66□□□□□ -1.34
VTI1A-208ENST00000494728 MEIG1Q5JSS6 88 aa6.66□□□□□ -1.34
VTI1A-208ENST00000494728 TRBV10-3A0A0K0K1G6 114 aa6.65□□□□□ -1.34
VTI1A-208ENST00000494728 PRYO14603 147 aa6.65□□□□□ -1.34
VTI1A-208ENST00000494728 LEPROTL1O95214 131 aa6.65□□□□□ -1.34
VTI1A-208ENST00000494728 DAND5Q8N907 189 aa6.65□□□□□ -1.34
VTI1A-208ENST00000494728 SMCR5Q8TEV8 140 aa6.65□□□□□ -1.34
VTI1A-208ENST00000494728 NDUFA12Q9UI09 145 aa6.65□□□□□ -1.34
VTI1A-208ENST00000494728 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
VTI1A-208ENST00000494728 FABP4P15090 132 aa6.64□□□□□ -1.35
VTI1A-208ENST00000494728 KCNQ1DNQ9H478 68 aa6.64□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BKO60814 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BJP06899 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BOP23527 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BBP33778 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BDP58876 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BCP62807 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST2H2BEQ16778 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.63□□□□□ -1.35
VTI1A-208ENST00000494728 LINC00337Q8N6G1 96 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BHQ93079 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BNQ99877 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 HIST1H2BMQ99879 126 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 PMCHL2Q9BQD1 86 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 PPDPFQ9H3Y8 114 aa6.63□□□□□ -1.35
VTI1A-208ENST00000494728 ATP6V1G1O75348 118 aa6.62□□□□□ -1.35
VTI1A-208ENST00000494728 HERV-K104P63124 156 aa6.62□□□□□ -1.35
VTI1A-208ENST00000494728 Q8NBF4 154 aa6.62□□□□□ -1.35
VTI1A-208ENST00000494728 HSPB8Q9UJY1 196 aa6.62□□□□□ -1.35
VTI1A-208ENST00000494728 ERC2-IT1O76042 136 aa6.61□□□□□ -1.35
VTI1A-208ENST00000494728 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
VTI1A-208ENST00000494728 MYMXA0A1B0GTQ4 84 aa6.6□□□□□ -1.35
VTI1A-208ENST00000494728 LEPROTO15243 131 aa6.6□□□□□ -1.35
VTI1A-208ENST00000494728 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-208ENST00000494728 S100A1P23297 94 aa6.6□□□□□ -1.35
VTI1A-208ENST00000494728 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
VTI1A-208ENST00000494728 KRTAP4-12Q9BQ66 201 aa6.6□□□□□ -1.35
VTI1A-208ENST00000494728 ZNF706Q9Y5V0 76 aaPredicted RBP6.6□□□□□ -1.35
VTI1A-208ENST00000494728 LOC107984156A0A0G2JMH3 177 aa6.59□□□□□ -1.35
VTI1A-208ENST00000494728 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.35
VTI1A-208ENST00000494728 B5MCH6 92 aa6.59□□□□□ -1.35
VTI1A-208ENST00000494728 ARL17AQ8IVW1 177 aa6.59□□□□□ -1.35
VTI1A-208ENST00000494728 Q9BRP9 147 aa6.59□□□□□ -1.35
VTI1A-208ENST00000494728 A0A0U1RQV1 116 aa6.58□□□□□ -1.36
VTI1A-208ENST00000494728 J3QQQ9 107 aa6.58□□□□□ -1.36
VTI1A-208ENST00000494728 CTAG1AP78358 180 aa6.58□□□□□ -1.36
VTI1A-208ENST00000494728 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms