RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 HIST1H2BMQ99879 126 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
ITGB1-217ENST00000494395 KRTAP11-1Q8IUC1 163 aa5.41□□□□□ -1.54
ITGB1-217ENST00000494395 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
ITGB1-217ENST00000494395 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
ITGB1-217ENST00000494395 TMEM223A0PJW6 202 aa5.4□□□□□ -1.54
ITGB1-217ENST00000494395 LEPROTL1O95214 131 aa5.4□□□□□ -1.54
ITGB1-217ENST00000494395 SRSF9Q13242 221 aaKnown RBP eCLIP5.4□□□□□ -1.54
ITGB1-217ENST00000494395 TMEM170BQ5T4T1 132 aa5.4□□□□□ -1.54
ITGB1-217ENST00000494395 FAM19A5Q7Z5A7 132 aaPredicted RBP5.4□□□□□ -1.54
ITGB1-217ENST00000494395 ZNF625Q96I27 306 aaPredicted RBP5.4□□□□□ -1.54
ITGB1-217ENST00000494395 M0QXV9 152 aa5.39□□□□□ -1.55
ITGB1-217ENST00000494395 OXTP01178 125 aa5.39□□□□□ -1.55
ITGB1-217ENST00000494395 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
ITGB1-217ENST00000494395 XAGE1AQ9HD64 81 aa5.39□□□□□ -1.55
ITGB1-217ENST00000494395 PSORS1C2Q9UIG4 136 aa5.39□□□□□ -1.55
ITGB1-217ENST00000494395 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
ITGB1-217ENST00000494395 FABP4P15090 132 aa5.38□□□□□ -1.55
ITGB1-217ENST00000494395 COA6Q5JTJ3 125 aaKnown RBP5.38□□□□□ -1.55
ITGB1-217ENST00000494395 HSPB8Q9UJY1 196 aa5.38□□□□□ -1.55
ITGB1-217ENST00000494395 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
ITGB1-217ENST00000494395 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
ITGB1-217ENST00000494395 TP73-AS1Q9UF72 201 aa5.37□□□□□ -1.55
ITGB1-217ENST00000494395 IGLV5-37A0A075B6J1 123 aa5.36□□□□□ -1.55
ITGB1-217ENST00000494395 H0Y8G0 127 aa5.36□□□□□ -1.55
ITGB1-217ENST00000494395 ATP6V1G1O75348 118 aa5.36□□□□□ -1.55
ITGB1-217ENST00000494395 SFTA2Q6UW10 78 aa5.36□□□□□ -1.55
ITGB1-217ENST00000494395 SPINK6Q6UWN8 80 aa5.36□□□□□ -1.55
ITGB1-217ENST00000494395 ERG28Q9UKR5 140 aa5.36□□□□□ -1.55
ITGB1-217ENST00000494395 C22orf24Q9Y442 160 aa5.36□□□□□ -1.55
ITGB1-217ENST00000494395 S100A1P23297 94 aa5.35□□□□□ -1.55
ITGB1-217ENST00000494395 PLNP26678 52 aa5.35□□□□□ -1.55
ITGB1-217ENST00000494395 PFN2P35080 140 aa5.35□□□□□ -1.55
ITGB1-217ENST00000494395 TSPEAR-AS2P59090 65 aa5.35□□□□□ -1.55
ITGB1-217ENST00000494395 COX17Q14061 63 aa5.35□□□□□ -1.55
ITGB1-217ENST00000494395 PMCHL2Q9BQD1 86 aa5.35□□□□□ -1.55
ITGB1-217ENST00000494395 DPM2O94777 84 aa5.34□□□□□ -1.55
ITGB1-217ENST00000494395 IGKCP01834 107 aa5.34□□□□□ -1.55
ITGB1-217ENST00000494395 IGLV7-43P04211 117 aa5.34□□□□□ -1.55
ITGB1-217ENST00000494395 C1orf137Q5JT78 98 aa5.34□□□□□ -1.55
ITGB1-217ENST00000494395 Q8NDZ9 215 aa5.34□□□□□ -1.55
ITGB1-217ENST00000494395 SND1-IT1Q9HBX3 110 aa5.34□□□□□ -1.55
ITGB1-217ENST00000494395 TNXBP22105 4242 aa5.34□□□□□ -1.56
ITGB1-217ENST00000494395 HERC1Q15751 4861 aa5.34□□□□□ -1.56
ITGB1-217ENST00000494395 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 LEPROTO15243 131 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 VPREB1P12018 145 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 UBE2BP63146 152 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 LINC01545Q5VT33 79 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
ITGB1-217ENST00000494395 LINC01600Q96MT4 127 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 MAP1LC3CQ9BXW4 147 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
ITGB1-217ENST00000494395 HERV-K104P63124 156 aa5.32□□□□□ -1.56
ITGB1-217ENST00000494395 LBHQ53QV2 105 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-217ENST00000494395 LINC00167Q96N53 147 aa5.32□□□□□ -1.56
ITGB1-217ENST00000494395 J3QQQ9 107 aa5.31□□□□□ -1.56
ITGB1-217ENST00000494395 C3orf79P0CE67 100 aa5.31□□□□□ -1.56
ITGB1-217ENST00000494395 MPLKIPQ8TAP9 179 aa5.31□□□□□ -1.56
ITGB1-217ENST00000494395 PLEKHB2Q96CS7 222 aa5.31□□□□□ -1.56
ITGB1-217ENST00000494395 MYMXA0A1B0GTQ4 84 aa5.3□□□□□ -1.56
ITGB1-217ENST00000494395 E9PLD3 99 aa5.3□□□□□ -1.56
ITGB1-217ENST00000494395 SMIM13P0DJ93 91 aa5.3□□□□□ -1.56
ITGB1-217ENST00000494395 LINC00158P58513 81 aa5.3□□□□□ -1.56
ITGB1-217ENST00000494395 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
ITGB1-217ENST00000494395 PET117Q6UWS5 81 aa5.3□□□□□ -1.56
ITGB1-217ENST00000494395 LOC107984156A0A0G2JMH3 177 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 A0A0U1RRA0 63 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 RPL37AP8A6NKH3 93 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 H0Y9J4 135 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 NMUP48645 174 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 HERVK_113P61574 105 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 REG3GQ6UW15 175 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 ARL17AQ8IVW1 177 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 MIR7-3HGQ8N6C7 128 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
ITGB1-217ENST00000494395 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
ITGB1-217ENST00000494395 ZNF861PO60384 105 aa5.28□□□□□ -1.56
ITGB1-217ENST00000494395 BCE1O60756 84 aa5.28□□□□□ -1.56
ITGB1-217ENST00000494395 KRTAP1-4P0C5Y4 121 aa5.28□□□□□ -1.56
ITGB1-217ENST00000494395 MEIG1Q5JSS6 88 aa5.28□□□□□ -1.56
ITGB1-217ENST00000494395 KRTAP13-1Q8IUC0 172 aa5.28□□□□□ -1.56
ITGB1-217ENST00000494395 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
ITGB1-217ENST00000494395 LINC00587B1AMM8 73 aa5.27□□□□□ -1.57
ITGB1-217ENST00000494395 RPL24P83731 157 aaKnown RBP5.27□□□□□ -1.57
ITGB1-217ENST00000494395 HIST3H2BBQ8N257 126 aa5.27□□□□□ -1.57
ITGB1-217ENST00000494395 IGKV2-28A0A075B6P5 120 aa5.26□□□□□ -1.57
ITGB1-217ENST00000494395 IGKV2D-26A0A0A0MRZ7 120 aa5.26□□□□□ -1.57
ITGB1-217ENST00000494395 IGKV2D-28P01615 120 aa5.26□□□□□ -1.57
ITGB1-217ENST00000494395 LGALS3P17931 250 aaKnown RBP5.26□□□□□ -1.57
ITGB1-217ENST00000494395 KRTDAPP60985 99 aa5.26□□□□□ -1.57
ITGB1-217ENST00000494395 DAND5Q8N907 189 aa5.26□□□□□ -1.57
ITGB1-217ENST00000494395 A0A0J9YXY3 114 aa5.25□□□□□ -1.57
ITGB1-217ENST00000494395 M0R378 163 aa5.25□□□□□ -1.57
ITGB1-217ENST00000494395 LITAFQ99732 161 aa5.25□□□□□ -1.57
ITGB1-217ENST00000494395 TMEM126AQ9H061 195 aa5.25□□□□□ -1.57
ITGB1-217ENST00000494395 TMEM238C9JI98 176 aa5.24□□□□□ -1.57
ITGB1-217ENST00000494395 RPL28P46779 137 aaKnown RBP5.24□□□□□ -1.57
ITGB1-217ENST00000494395 ADAMTSL4-AS1Q5T5F5 129 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms