RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 FN1P02751 2386 aaKnown RBP13.2□□□□□ -0.3
COL27A1-207ENST00000494090 TP53AIP1Q9HCN2 124 aa13.19□□□□□ -0.3
COL27A1-207ENST00000494090 SPINK1P00995 79 aa13.18□□□□□ -0.3
COL27A1-207ENST00000494090 C6orf48Q9UBA6 75 aa13.18□□□□□ -0.3
COL27A1-207ENST00000494090 C1orf64Q8NEQ6 169 aa13.16□□□□□ -0.3
COL27A1-207ENST00000494090 BCE1O60756 84 aa13.16□□□□□ -0.3
COL27A1-207ENST00000494090 TLN2Q9Y4G6 2542 aa13.16□□□□□ -0.3
COL27A1-207ENST00000494090 COL27A1Q8IZC6 1860 aaPredicted RBP13.15□□□□□ -0.3
COL27A1-207ENST00000494090 PMAIP1Q13794 54 aa13.15□□□□□ -0.3
COL27A1-207ENST00000494090 CRYGAP11844 174 aa13.14□□□□□ -0.31
COL27A1-207ENST00000494090 CEP295Q9C0D2 2601 aa13.13□□□□□ -0.31
COL27A1-207ENST00000494090 ANKRD11Q6UB99 2663 aaPredicted RBP13.13□□□□□ -0.31
COL27A1-207ENST00000494090 ELOF1P60002 83 aaKnown RBP13.12□□□□□ -0.31
COL27A1-207ENST00000494090 MOBPQ13875 183 aa13.11□□□□□ -0.31
COL27A1-207ENST00000494090 IGKV2D-30A0A075B6S6 120 aa13.1□□□□□ -0.31
COL27A1-207ENST00000494090 IGKV2-30P06310 120 aa13.1□□□□□ -0.31
COL27A1-207ENST00000494090 PSPHP1O15172 72 aa13.09□□□□□ -0.31
COL27A1-207ENST00000494090 KRTAP24-1Q3LI83 254 aa13.09□□□□□ -0.31
COL27A1-207ENST00000494090 SMIM29Q86T20 159 aa13.09□□□□□ -0.31
COL27A1-207ENST00000494090 LITAFQ99732 161 aa13.09□□□□□ -0.31
COL27A1-207ENST00000494090 LOC110117498A0A087WWA1 95 aa13.08□□□□□ -0.32
COL27A1-207ENST00000494090 NBDYA0A0U1RRE5 68 aa13.08□□□□□ -0.32
COL27A1-207ENST00000494090 SPACA4Q8TDM5 124 aa13.08□□□□□ -0.32
COL27A1-207ENST00000494090 USP9YO00507 2555 aaPredicted RBP13.08□□□□□ -0.32
COL27A1-207ENST00000494090 Q6ZQT0 140 aa13.08□□□□□ -0.32
COL27A1-207ENST00000494090 Q8NBF4 154 aa13.07□□□□□ -0.32
COL27A1-207ENST00000494090 FAM229AH3BQW9 127 aa13.07□□□□□ -0.32
COL27A1-207ENST00000494090 Q6ZRP5 223 aa13.06□□□□□ -0.32
COL27A1-207ENST00000494090 Q6ZRX8 168 aa13.06□□□□□ -0.32
COL27A1-207ENST00000494090 PCSK5Q92824 1860 aa13.06□□□□□ -0.32
COL27A1-207ENST00000494090 C16orf90A8MZG2 172 aa13.05□□□□□ -0.32
COL27A1-207ENST00000494090 H3BPC8 53 aa13.05□□□□□ -0.32
COL27A1-207ENST00000494090 Q8NAQ8 132 aa13.04□□□□□ -0.32
COL27A1-207ENST00000494090 C7orf65Q6ZTY9 151 aa13.04□□□□□ -0.32
COL27A1-207ENST00000494090 RTL8CO15255 209 aa13.04□□□□□ -0.32
COL27A1-207ENST00000494090 CENPFP49454 3210 aa13.03□□□□□ -0.32
COL27A1-207ENST00000494090 GVQW2A0A096LPI5 108 aaPredicted RBP13.03□□□□□ -0.32
COL27A1-207ENST00000494090 ACYP2P14621 99 aa13.02□□□□□ -0.33
COL27A1-207ENST00000494090 CHD8Q9HCK8 2581 aa13.01□□□□□ -0.33
COL27A1-207ENST00000494090 SETD2Q9BYW2 2564 aaPredicted RBP13□□□□□ -0.33
COL27A1-207ENST00000494090 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
COL27A1-207ENST00000494090 LINC00476Q8WZB0 136 aa12.99□□□□□ -0.33
COL27A1-207ENST00000494090 LINC00588Q9Y4M8 146 aa12.99□□□□□ -0.33
COL27A1-207ENST00000494090 RPS28P62857 69 aaKnown RBP12.98□□□□□ -0.33
COL27A1-207ENST00000494090 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
COL27A1-207ENST00000494090 PKD1L2Q7Z442 2459 aa12.96□□□□□ -0.33
COL27A1-207ENST00000494090 A0A1B0GU69 56 aa12.96□□□□□ -0.33
COL27A1-207ENST00000494090 TYMSOSQ8TAI1 123 aa12.96□□□□□ -0.34
COL27A1-207ENST00000494090 WWC2-AS2Q96NR7 200 aa12.95□□□□□ -0.34
COL27A1-207ENST00000494090 DNAH10OSP0CZ25 163 aa12.95□□□□□ -0.34
COL27A1-207ENST00000494090 ZNF462Q96JM2 2506 aa12.94□□□□□ -0.34
COL27A1-207ENST00000494090 LINC00313P59037 77 aa12.94□□□□□ -0.34
COL27A1-207ENST00000494090 MUC4Q99102 2169 aa12.92□□□□□ -0.34
COL27A1-207ENST00000494090 IGLV6-57P01721 117 aa12.91□□□□□ -0.34
COL27A1-207ENST00000494090 TRAV22A0A0B4J277 110 aa12.9□□□□□ -0.34
COL27A1-207ENST00000494090 PRO0628Q9UI54 55 aa12.9□□□□□ -0.34
COL27A1-207ENST00000494090 TRBV7-4A0A0J9YYF1 115 aa12.88□□□□□ -0.35
COL27A1-207ENST00000494090 C8orf87E5RJ46 101 aa12.88□□□□□ -0.35
COL27A1-207ENST00000494090 VPREB1P12018 145 aa12.87□□□□□ -0.35
COL27A1-207ENST00000494090 PLA2G1BP04054 148 aaKnown RBP12.87□□□□□ -0.35
COL27A1-207ENST00000494090 ST20-AS1Q8NBB2 130 aa12.87□□□□□ -0.35
COL27A1-207ENST00000494090 CSNK1G2-AS1Q8NCQ2 148 aa12.86□□□□□ -0.35
COL27A1-207ENST00000494090 TM2D3Q9BRN9 247 aa12.86□□□□□ -0.35
COL27A1-207ENST00000494090 LOC101927531A0A1B0GV80 90 aa12.82□□□□□ -0.36
COL27A1-207ENST00000494090 CHTF8P0CG12 524 aa12.82□□□□□ -0.36
COL27A1-207ENST00000494090 MTORP42345 2549 aa12.81□□□□□ -0.36
COL27A1-207ENST00000494090 C4orf26Q17RF5 130 aa12.8□□□□□ -0.36
COL27A1-207ENST00000494090 ATP11AUNQ6ZP68 121 aa12.8□□□□□ -0.36
COL27A1-207ENST00000494090 EIF4EBP3O60516 100 aaPredicted RBP12.79□□□□□ -0.36
COL27A1-207ENST00000494090 SPTBN4Q9H254 2564 aa12.79□□□□□ -0.36
COL27A1-207ENST00000494090 A8MWP4 228 aa12.78□□□□□ -0.36
COL27A1-207ENST00000494090 RPL37AP61513 92 aaKnown RBP12.77□□□□□ -0.36
COL27A1-207ENST00000494090 KCNQ1DNQ9H478 68 aa12.76□□□□□ -0.37
COL27A1-207ENST00000494090 Q96NJ1 140 aa12.75□□□□□ -0.37
COL27A1-207ENST00000494090 ANKRD17O75179 2603 aaKnown RBP12.75□□□□□ -0.37
COL27A1-207ENST00000494090 IGLV1-50A0A075B6I6 118 aa12.75□□□□□ -0.37
COL27A1-207ENST00000494090 SPAG11AQ6PDA7 123 aa12.75□□□□□ -0.37
COL27A1-207ENST00000494090 ERC2-IT1O76042 136 aa12.75□□□□□ -0.37
COL27A1-207ENST00000494090 FASNP49327 2511 aaKnown RBP12.73□□□□□ -0.37
COL27A1-207ENST00000494090 LINC00528Q8N1L1 170 aa12.73□□□□□ -0.37
COL27A1-207ENST00000494090 PRR34Q9NV39 138 aa12.73□□□□□ -0.37
COL27A1-207ENST00000494090 A0A096LNT2 108 aa12.72□□□□□ -0.37
COL27A1-207ENST00000494090 SERTAD4-AS1Q5TG53 156 aa12.72□□□□□ -0.37
COL27A1-207ENST00000494090 MRPL34Q9BQ48 92 aaKnown RBP12.72□□□□□ -0.37
COL27A1-207ENST00000494090 FAM168BA1KXE4 195 aa12.72□□□□□ -0.37
COL27A1-207ENST00000494090 C19orf73Q9NVV2 129 aa12.71□□□□□ -0.37
COL27A1-207ENST00000494090 POLQO75417 2590 aa12.71□□□□□ -0.37
COL27A1-207ENST00000494090 GIG44P09565 113 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-207ENST00000494090 F8P00451 2351 aa12.69□□□□□ -0.38
COL27A1-207ENST00000494090 J3QL48 77 aa12.68□□□□□ -0.38
COL27A1-207ENST00000494090 SSBP3-AS1Q7Z2R9 100 aa12.68□□□□□ -0.38
COL27A1-207ENST00000494090 LINC00612Q8N6U2 182 aa12.68□□□□□ -0.38
COL27A1-207ENST00000494090 K7EIL1 84 aa12.68□□□□□ -0.38
COL27A1-207ENST00000494090 K7EQZ3 153 aa12.67□□□□□ -0.38
COL27A1-207ENST00000494090 GOLGB1Q14789 3259 aaKnown RBP12.65□□□□□ -0.38
COL27A1-207ENST00000494090 C15orf56Q8N910 161 aa12.64□□□□□ -0.39
COL27A1-207ENST00000494090 KRTAP10-11P60412 298 aa12.62□□□□□ -0.39
COL27A1-207ENST00000494090 ZNF861PO60384 105 aa12.62□□□□□ -0.39
COL27A1-207ENST00000494090 PLA2G2DQ9UNK4 145 aa12.61□□□□□ -0.39
COL27A1-207ENST00000494090 TLX1NBP0CAT3 122 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms