RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
ACTB-213ENST00000493945 HIGD1BQ9P298 99 aa9.49□□□□□ -0.89
ACTB-213ENST00000493945 SCXQ7RTU7 201 aa9.48□□□□□ -0.89
ACTB-213ENST00000493945 DAND5Q8N907 189 aa9.48□□□□□ -0.89
ACTB-213ENST00000493945 HIST1H4GQ99525 98 aa9.48□□□□□ -0.89
ACTB-213ENST00000493945 C12orf57Q99622 126 aa9.48□□□□□ -0.89
ACTB-213ENST00000493945 TP73-AS1Q9UF72 201 aa9.48□□□□□ -0.89
ACTB-213ENST00000493945 CBY1Q9Y3M2 126 aa9.48□□□□□ -0.89
ACTB-213ENST00000493945 LOC107984156A0A0G2JMH3 177 aa9.47□□□□□ -0.89
ACTB-213ENST00000493945 M0QXV9 152 aa9.47□□□□□ -0.89
ACTB-213ENST00000493945 ARL17AQ8IVW1 177 aa9.47□□□□□ -0.89
ACTB-213ENST00000493945 LITAFQ99732 161 aa9.47□□□□□ -0.89
ACTB-213ENST00000493945 PKHD1P08F94 4074 aa9.46□□□□□ -0.89
ACTB-213ENST00000493945 NDUFC2O95298 119 aa9.46□□□□□ -0.9
ACTB-213ENST00000493945 CIRBP-AS1Q8TBR5 109 aa9.46□□□□□ -0.9
ACTB-213ENST00000493945 LINC00308Q8TCZ7 52 aa9.46□□□□□ -0.9
ACTB-213ENST00000493945 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.9
ACTB-213ENST00000493945 IGLV5-37A0A075B6J1 123 aa9.45□□□□□ -0.9
ACTB-213ENST00000493945 NPC2P61916 151 aa9.45□□□□□ -0.9
ACTB-213ENST00000493945 UBE2BP63146 152 aa9.45□□□□□ -0.9
ACTB-213ENST00000493945 TAL2Q16559 108 aa9.45□□□□□ -0.9
ACTB-213ENST00000493945 ADAMTSL4-AS1Q5T5F5 129 aa9.45□□□□□ -0.9
ACTB-213ENST00000493945 LINC00518Q8N0U6 118 aa9.45□□□□□ -0.9
ACTB-213ENST00000493945 HNRNPA3P51991 378 aaKnown RBP9.44□□□□□ -0.9
ACTB-213ENST00000493945 MRPL55Q7Z7F7 128 aaKnown RBP9.44□□□□□ -0.9
ACTB-213ENST00000493945 DNAH5Q8TE73 4624 aa9.43□□□□□ -0.9
ACTB-213ENST00000493945 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
ACTB-213ENST00000493945 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
ACTB-213ENST00000493945 A6NJY4 79 aa9.43□□□□□ -0.9
ACTB-213ENST00000493945 PANO1I0J062 215 aa9.43□□□□□ -0.9
ACTB-213ENST00000493945 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
ACTB-213ENST00000493945 M0R378 163 aa9.42□□□□□ -0.9
ACTB-213ENST00000493945 VPREB1P12018 145 aa9.42□□□□□ -0.9
ACTB-213ENST00000493945 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
ACTB-213ENST00000493945 A0A1W2PNN7 141 aa9.41□□□□□ -0.9
ACTB-213ENST00000493945 EPM2AB3EWF7 344 aa9.41□□□□□ -0.9
ACTB-213ENST00000493945 S100A7L2Q5SY68 101 aa9.41□□□□□ -0.9
ACTB-213ENST00000493945 SERTAD4-AS1Q5TG53 156 aa9.41□□□□□ -0.9
ACTB-213ENST00000493945 HSD52Q0P140 79 aa9.4□□□□□ -0.9
ACTB-213ENST00000493945 MUSTN1Q8IVN3 82 aa9.4□□□□□ -0.9
ACTB-213ENST00000493945 NCR3O14931 201 aa9.39□□□□□ -0.91
ACTB-213ENST00000493945 XGP55808 180 aa9.39□□□□□ -0.91
ACTB-213ENST00000493945 C2orf91Q6ZV80 131 aa9.39□□□□□ -0.91
ACTB-213ENST00000493945 PRO1933Q9H354 126 aa9.39□□□□□ -0.91
ACTB-213ENST00000493945 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
ACTB-213ENST00000493945 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
ACTB-213ENST00000493945 SOSTDC1Q6X4U4 206 aa9.38□□□□□ -0.91
ACTB-213ENST00000493945 PHF5AQ7RTV0 110 aaKnown RBP9.38□□□□□ -0.91
ACTB-213ENST00000493945 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
ACTB-213ENST00000493945 HAMPP81172 84 aa9.37□□□□□ -0.91
ACTB-213ENST00000493945 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
ACTB-213ENST00000493945 PLA2G1BP04054 148 aaKnown RBP9.36□□□□□ -0.91
ACTB-213ENST00000493945 DDTP30046 118 aa9.36□□□□□ -0.91
ACTB-213ENST00000493945 CEND1Q8N111 149 aa9.36□□□□□ -0.91
ACTB-213ENST00000493945 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
ACTB-213ENST00000493945 OR13C6PQ8NH95 151 aa9.36□□□□□ -0.91
ACTB-213ENST00000493945 LINC00167Q96N53 147 aa9.36□□□□□ -0.91
ACTB-213ENST00000493945 LRP1BQ9NZR2 4599 aa9.36□□□□□ -0.91
ACTB-213ENST00000493945 GAGE10A6NGK3 116 aa9.35□□□□□ -0.91
ACTB-213ENST00000493945 M0R143 59 aa9.35□□□□□ -0.91
ACTB-213ENST00000493945 A4D1N5 150 aa9.34□□□□□ -0.91
ACTB-213ENST00000493945 PRYO14603 147 aa9.34□□□□□ -0.91
ACTB-213ENST00000493945 RPL37AP61513 92 aaKnown RBP9.34□□□□□ -0.91
ACTB-213ENST00000493945 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
ACTB-213ENST00000493945 IGKV2-28A0A075B6P5 120 aa9.33□□□□□ -0.92
ACTB-213ENST00000493945 IGKV2D-28P01615 120 aa9.33□□□□□ -0.92
ACTB-213ENST00000493945 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
ACTB-213ENST00000493945 IGLV1-50A0A075B6I6 118 aa9.32□□□□□ -0.92
ACTB-213ENST00000493945 A6NDN8 102 aa9.32□□□□□ -0.92
ACTB-213ENST00000493945 RPL37AP8A6NKH3 93 aa9.32□□□□□ -0.92
ACTB-213ENST00000493945 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
ACTB-213ENST00000493945 EPPK1P58107 5090 aaKnown RBP9.32□□□□□ -0.92
ACTB-213ENST00000493945 TRBV10-3A0A0K0K1G6 114 aa9.31□□□□□ -0.92
ACTB-213ENST00000493945 REG3GQ6UW15 175 aa9.31□□□□□ -0.92
ACTB-213ENST00000493945 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
ACTB-213ENST00000493945 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
ACTB-213ENST00000493945 A0A0B4J2C4 111 aa9.3□□□□□ -0.92
ACTB-213ENST00000493945 EIF4EBP3O60516 100 aaPredicted RBP9.3□□□□□ -0.92
ACTB-213ENST00000493945 IGLV6-57P01721 117 aa9.3□□□□□ -0.92
ACTB-213ENST00000493945 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
ACTB-213ENST00000493945 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
ACTB-213ENST00000493945 Q8NDZ9 215 aa9.3□□□□□ -0.92
ACTB-213ENST00000493945 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
ACTB-213ENST00000493945 KCNQ1DNQ9H478 68 aa9.29□□□□□ -0.92
ACTB-213ENST00000493945 ETDCA0A1B0GVM5 59 aa9.28□□□□□ -0.92
ACTB-213ENST00000493945 Q8N1X5 172 aa9.28□□□□□ -0.92
ACTB-213ENST00000493945 PSORS1C2Q9UIG4 136 aa9.28□□□□□ -0.92
ACTB-213ENST00000493945 BCE1O60756 84 aa9.27□□□□□ -0.93
ACTB-213ENST00000493945 UBE2AP49459 152 aa9.27□□□□□ -0.93
ACTB-213ENST00000493945 CTAG1AP78358 180 aa9.27□□□□□ -0.93
ACTB-213ENST00000493945 Q5VSD8 79 aa9.27□□□□□ -0.93
ACTB-213ENST00000493945 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
ACTB-213ENST00000493945 DIRC1Q969H9 104 aa9.27□□□□□ -0.93
ACTB-213ENST00000493945 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
ACTB-213ENST00000493945 RPL28P46779 137 aaKnown RBP9.26□□□□□ -0.93
ACTB-213ENST00000493945 ZNF73O43830 326 aaPredicted RBP9.25□□□□□ -0.93
ACTB-213ENST00000493945 FXYD2P54710 66 aa9.25□□□□□ -0.93
ACTB-213ENST00000493945 VAMP3Q15836 100 aa9.25□□□□□ -0.93
ACTB-213ENST00000493945 Q1RN00 199 aa9.25□□□□□ -0.93
ACTB-213ENST00000493945 NHP2Q9NX24 153 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms