RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 TLX1NBP0CAT3 122 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 PFN2P35080 140 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 CXCL5P42830 114 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 FXYD2P54710 66 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 HERV-K104P63124 156 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 MUSTN1Q8IVN3 82 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 MIR7-3HGQ8N6C7 128 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 SPANXDQ9BXN6 97 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 SND1-IT1Q9HBX3 110 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 SPANXCQ9NY87 97 aa5.75□□□□□ -1.49
TM4SF1-203ENST00000493298 F8WDY8 70 aa5.74□□□□□ -1.49
TM4SF1-203ENST00000493298 PRSS2P07478 247 aa5.74□□□□□ -1.49
TM4SF1-203ENST00000493298 CKS1BP61024 79 aa5.74□□□□□ -1.49
TM4SF1-203ENST00000493298 PRR3P79522 188 aaKnown RBP5.74□□□□□ -1.49
TM4SF1-203ENST00000493298 Q5VSD8 79 aa5.74□□□□□ -1.49
TM4SF1-203ENST00000493298 LINC00308Q8TCZ7 52 aa5.74□□□□□ -1.49
TM4SF1-203ENST00000493298 CARD19Q96LW7 228 aa5.74□□□□□ -1.49
TM4SF1-203ENST00000493298 IGKV2-28A0A075B6P5 120 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 A0A096LNI7 61 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 FAM168BA1KXE4 195 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 PCP4L1A6NKN8 68 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 EPM2AB3EWF7 344 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 IGKV2D-28P01615 120 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 CHTF8P0CG12 524 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 HNRNPA3P51991 378 aaKnown RBP5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 NPC2P61916 151 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 BVES-AS1Q5T3Y7 98 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 SNHG12Q9BXW3 62 aa5.73□□□□□ -1.49
TM4SF1-203ENST00000493298 A0A1W2PNN7 141 aa5.72□□□□□ -1.49
TM4SF1-203ENST00000493298 TSTD3H0UI37 97 aa5.72□□□□□ -1.49
TM4SF1-203ENST00000493298 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
TM4SF1-203ENST00000493298 KRTAP11-1Q8IUC1 163 aa5.72□□□□□ -1.49
TM4SF1-203ENST00000493298 XAGE1AQ9HD64 81 aa5.72□□□□□ -1.49
TM4SF1-203ENST00000493298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
TM4SF1-203ENST00000493298 NDUFC2-KCTD14E9PQ53 114 aa5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 LINC00158P58513 81 aa5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 CIRBPQ14011 172 aaKnown RBP5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 COX17Q14061 63 aa5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 SCGB1D4Q6XE38 83 aa5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 SCXQ7RTU7 201 aa5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 CEND1Q8N111 149 aa5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 PPDPFQ9H3Y8 114 aa5.71□□□□□ -1.5
TM4SF1-203ENST00000493298 A0A1B0GWB2 263 aa5.7□□□□□ -1.5
TM4SF1-203ENST00000493298 A4D1N5 150 aa5.7□□□□□ -1.5
TM4SF1-203ENST00000493298 VPREB1P12018 145 aa5.7□□□□□ -1.5
TM4SF1-203ENST00000493298 HINT1P49773 126 aaPredicted RBP5.7□□□□□ -1.5
TM4SF1-203ENST00000493298 HSD52Q0P140 79 aa5.7□□□□□ -1.5
TM4SF1-203ENST00000493298 TAL2Q16559 108 aa5.7□□□□□ -1.5
TM4SF1-203ENST00000493298 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
TM4SF1-203ENST00000493298 CFC1BP0CG36 223 aa5.69□□□□□ -1.5
TM4SF1-203ENST00000493298 CFC1P0CG37 223 aa5.69□□□□□ -1.5
TM4SF1-203ENST00000493298 GAGE2EQ4V326 116 aa5.69□□□□□ -1.5
TM4SF1-203ENST00000493298 C14orf177Q52M58 125 aa5.69□□□□□ -1.5
TM4SF1-203ENST00000493298 SFTA2Q6UW10 78 aa5.69□□□□□ -1.5
TM4SF1-203ENST00000493298 LINC00337Q8N6G1 96 aa5.69□□□□□ -1.5
TM4SF1-203ENST00000493298 GAGE2DQ9UEU5 116 aa5.69□□□□□ -1.5
TM4SF1-203ENST00000493298 LOC107984640A0A0U1RRK4 108 aa5.68□□□□□ -1.5
TM4SF1-203ENST00000493298 TMEM238C9JI98 176 aa5.68□□□□□ -1.5
TM4SF1-203ENST00000493298 K7ERJ3 54 aa5.68□□□□□ -1.5
TM4SF1-203ENST00000493298 Q6ZVH6 145 aa5.68□□□□□ -1.5
TM4SF1-203ENST00000493298 CIRBP-AS1Q8TBR5 109 aa5.68□□□□□ -1.5
TM4SF1-203ENST00000493298 HIST1H4GQ99525 98 aa5.68□□□□□ -1.5
TM4SF1-203ENST00000493298 TNXBP22105 4242 aa5.68□□□□□ -1.5
TM4SF1-203ENST00000493298 INAFM2P0DMQ5 153 aa5.67□□□□□ -1.5
TM4SF1-203ENST00000493298 IFITM1P13164 125 aa5.67□□□□□ -1.5
TM4SF1-203ENST00000493298 GAGE2BQ13066 116 aa5.67□□□□□ -1.5
TM4SF1-203ENST00000493298 SPACA4Q8TDM5 124 aa5.67□□□□□ -1.5
TM4SF1-203ENST00000493298 PLA2G2DQ9UNK4 145 aa5.67□□□□□ -1.5
TM4SF1-203ENST00000493298 IGLV5-37A0A075B6J1 123 aa5.66□□□□□ -1.5
TM4SF1-203ENST00000493298 SRSF9Q13242 221 aaKnown RBP eCLIP5.66□□□□□ -1.5
TM4SF1-203ENST00000493298 IGKV2-24A0A0C4DH68 120 aa5.65□□□□□ -1.5
TM4SF1-203ENST00000493298 RPL18AQ02543 176 aaKnown RBP5.65□□□□□ -1.5
TM4SF1-203ENST00000493298 LINC00528Q8N1L1 170 aa5.65□□□□□ -1.5
TM4SF1-203ENST00000493298 TAX1BP3O14907 124 aa5.64□□□□□ -1.51
TM4SF1-203ENST00000493298 NDUFC2O95298 119 aa5.64□□□□□ -1.51
TM4SF1-203ENST00000493298 C7orf33Q8WU49 177 aa5.64□□□□□ -1.51
TM4SF1-203ENST00000493298 HMCN2Q8NDA2 5059 aa5.64□□□□□ -1.51
TM4SF1-203ENST00000493298 A0A087WYN8 130 aa5.63□□□□□ -1.51
TM4SF1-203ENST00000493298 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.63□□□□□ -1.51
TM4SF1-203ENST00000493298 IGLV6-57P01721 117 aa5.63□□□□□ -1.51
TM4SF1-203ENST00000493298 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
TM4SF1-203ENST00000493298 C22orf24Q9Y442 160 aa5.63□□□□□ -1.51
TM4SF1-203ENST00000493298 A0A0B4J2C4 111 aa5.62□□□□□ -1.51
TM4SF1-203ENST00000493298 M0R143 59 aa5.62□□□□□ -1.51
TM4SF1-203ENST00000493298 NCR3O14931 201 aa5.62□□□□□ -1.51
TM4SF1-203ENST00000493298 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
TM4SF1-203ENST00000493298 LINC00167Q96N53 147 aa5.62□□□□□ -1.51
TM4SF1-203ENST00000493298 NHP2Q9NX24 153 aaKnown RBP5.62□□□□□ -1.51
TM4SF1-203ENST00000493298 TRBV10-3A0A0K0K1G6 114 aa5.61□□□□□ -1.51
TM4SF1-203ENST00000493298 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
TM4SF1-203ENST00000493298 FAM229AH3BQW9 127 aa5.61□□□□□ -1.51
TM4SF1-203ENST00000493298 BATFQ16520 125 aa5.61□□□□□ -1.51
TM4SF1-203ENST00000493298 FAM19A5Q7Z5A7 132 aaPredicted RBP5.61□□□□□ -1.51
TM4SF1-203ENST00000493298 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
TM4SF1-203ENST00000493298 IGLV1-50A0A075B6I6 118 aa5.6□□□□□ -1.51
TM4SF1-203ENST00000493298 TRBV10-2A0A0K0K1G8 114 aa5.6□□□□□ -1.51
TM4SF1-203ENST00000493298 TSPAN13O95857 204 aa5.6□□□□□ -1.51
TM4SF1-203ENST00000493298 RPL24P83731 157 aaKnown RBP5.6□□□□□ -1.51
TM4SF1-203ENST00000493298 GAGE10A6NGK3 116 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms