RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
SAMM50-204ENST00000493161 ERG28Q9UKR5 140 aa7.7□□□□□ -1.18
SAMM50-204ENST00000493161 LINC01546A6NGU7 62 aa7.69□□□□□ -1.18
SAMM50-204ENST00000493161 GNB1LQ9BYB4 327 aa7.69□□□□□ -1.18
SAMM50-204ENST00000493161 H3BRM9 83 aa7.68□□□□□ -1.18
SAMM50-204ENST00000493161 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
SAMM50-204ENST00000493161 IGLC3P0DOY3 106 aa7.66□□□□□ -1.18
SAMM50-204ENST00000493161 ZNF22P17026 224 aaPredicted RBP7.66□□□□□ -1.18
SAMM50-204ENST00000493161 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
SAMM50-204ENST00000493161 COX17Q14061 63 aa7.65□□□□□ -1.18
SAMM50-204ENST00000493161 LINC01549A6NIU2 74 aa7.63□□□□□ -1.19
SAMM50-204ENST00000493161 NDUFA6P56556 154 aa7.63□□□□□ -1.19
SAMM50-204ENST00000493161 A0A096LNJ9 63 aa7.62□□□□□ -1.19
SAMM50-204ENST00000493161 A0A0U1RRA0 63 aa7.62□□□□□ -1.19
SAMM50-204ENST00000493161 SPINK1P00995 79 aa7.62□□□□□ -1.19
SAMM50-204ENST00000493161 SMCR5Q8TEV8 140 aa7.62□□□□□ -1.19
SAMM50-204ENST00000493161 ZNF706Q9Y5V0 76 aaPredicted RBP7.62□□□□□ -1.19
SAMM50-204ENST00000493161 LINC00158P58513 81 aa7.61□□□□□ -1.19
SAMM50-204ENST00000493161 FA2HQ7L5A8 372 aa7.61□□□□□ -1.19
SAMM50-204ENST00000493161 C11orf86A6NJI1 115 aa7.6□□□□□ -1.19
SAMM50-204ENST00000493161 Q8N377 158 aa7.6□□□□□ -1.19
SAMM50-204ENST00000493161 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.19
SAMM50-204ENST00000493161 SMCO4Q9NRQ5 59 aa7.59□□□□□ -1.19
SAMM50-204ENST00000493161 KRTAP4-16G5E9R7 235 aaPredicted RBP7.58□□□□□ -1.2
SAMM50-204ENST00000493161 NCR3O14931 201 aa7.58□□□□□ -1.2
SAMM50-204ENST00000493161 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
SAMM50-204ENST00000493161 SPRR1AP35321 89 aa7.58□□□□□ -1.2
SAMM50-204ENST00000493161 LINC00483Q53H64 154 aa7.58□□□□□ -1.2
SAMM50-204ENST00000493161 XP32Q5T750 250 aa7.58□□□□□ -1.2
SAMM50-204ENST00000493161 URB1-AS1Q96HZ7 61 aa7.58□□□□□ -1.2
SAMM50-204ENST00000493161 TRAV9-1A0A075B6T8 112 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 IGLV9-49A0A0B4J1Y8 123 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 PRYO14603 147 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 ERC2-IT1O76042 136 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 MOBPQ13875 183 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 PMCHL1Q16048 86 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 TMEM170BQ5T4T1 132 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 GAGE2AQ6NT46 116 aa7.57□□□□□ -1.2
SAMM50-204ENST00000493161 MT1HP80294 61 aa7.56□□□□□ -1.2
SAMM50-204ENST00000493161 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
SAMM50-204ENST00000493161 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
SAMM50-204ENST00000493161 FABP9Q0Z7S8 132 aa7.55□□□□□ -1.2
SAMM50-204ENST00000493161 BAGE3Q86Y29 109 aa7.55□□□□□ -1.2
SAMM50-204ENST00000493161 BOD1L2Q8IYS8 172 aa7.55□□□□□ -1.2
SAMM50-204ENST00000493161 NDUFA12Q9UI09 145 aa7.55□□□□□ -1.2
SAMM50-204ENST00000493161 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
SAMM50-204ENST00000493161 ETDCA0A1B0GVM5 59 aa7.54□□□□□ -1.2
SAMM50-204ENST00000493161 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
SAMM50-204ENST00000493161 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
SAMM50-204ENST00000493161 B5MCH6 92 aa7.52□□□□□ -1.21
SAMM50-204ENST00000493161 SLC25A20O43772 301 aa7.52□□□□□ -1.21
SAMM50-204ENST00000493161 HBDP02042 147 aa7.52□□□□□ -1.21
SAMM50-204ENST00000493161 SSBP3-AS1Q7Z2R9 100 aa7.52□□□□□ -1.21
SAMM50-204ENST00000493161 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
SAMM50-204ENST00000493161 MIR7-3HGQ8N6C7 128 aa7.52□□□□□ -1.21
SAMM50-204ENST00000493161 TMEM223A0PJW6 202 aa7.51□□□□□ -1.21
SAMM50-204ENST00000493161 LINC00614P0C842 121 aa7.51□□□□□ -1.21
SAMM50-204ENST00000493161 S100PP25815 95 aa7.51□□□□□ -1.21
SAMM50-204ENST00000493161 C18orf32Q8TCD1 76 aa7.51□□□□□ -1.21
SAMM50-204ENST00000493161 Q9BRP9 147 aa7.51□□□□□ -1.21
SAMM50-204ENST00000493161 TMEM218A2RU14 115 aa7.5□□□□□ -1.21
SAMM50-204ENST00000493161 ATP6V1G1O75348 118 aa7.5□□□□□ -1.21
SAMM50-204ENST00000493161 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
SAMM50-204ENST00000493161 PCOTHQ58A44 107 aa7.49□□□□□ -1.21
SAMM50-204ENST00000493161 MEIG1Q5JSS6 88 aa7.49□□□□□ -1.21
SAMM50-204ENST00000493161 COX19Q49B96 90 aa7.48□□□□□ -1.21
SAMM50-204ENST00000493161 SEC11CQ9BY50 192 aa7.47□□□□□ -1.21
SAMM50-204ENST00000493161 CLLU1Q5K131 121 aa7.46□□□□□ -1.22
SAMM50-204ENST00000493161 IGLV8-61A0A075B6I0 122 aa7.45□□□□□ -1.22
SAMM50-204ENST00000493161 KRTAP10-6P60371 365 aaPredicted RBP7.45□□□□□ -1.22
SAMM50-204ENST00000493161 C9orf153Q5TBE3 101 aa7.45□□□□□ -1.22
SAMM50-204ENST00000493161 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
SAMM50-204ENST00000493161 DDTP30046 118 aa7.44□□□□□ -1.22
SAMM50-204ENST00000493161 UQCC3Q6UW78 93 aa7.44□□□□□ -1.22
SAMM50-204ENST00000493161 Q6ZRX8 168 aa7.44□□□□□ -1.22
SAMM50-204ENST00000493161 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
SAMM50-204ENST00000493161 C9orf92A6NGG3 77 aa7.43□□□□□ -1.22
SAMM50-204ENST00000493161 HERV-K104P63124 156 aa7.43□□□□□ -1.22
SAMM50-204ENST00000493161 ST20-AS1Q8NBB2 130 aa7.43□□□□□ -1.22
SAMM50-204ENST00000493161 TRAV12-1A0A0B4J245 112 aa7.42□□□□□ -1.22
SAMM50-204ENST00000493161 TSPEAR-AS2P59090 65 aa7.41□□□□□ -1.22
SAMM50-204ENST00000493161 S100A12P80511 92 aa7.41□□□□□ -1.22
SAMM50-204ENST00000493161 IFI27L1Q96BM0 104 aa7.41□□□□□ -1.22
SAMM50-204ENST00000493161 RPS10P5Q9NQ39 176 aa7.41□□□□□ -1.22
SAMM50-204ENST00000493161 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
SAMM50-204ENST00000493161 HRCT1Q6UXD1 115 aa7.4□□□□□ -1.22
SAMM50-204ENST00000493161 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
SAMM50-204ENST00000493161 TRBV10-2A0A0K0K1G8 114 aa7.39□□□□□ -1.23
SAMM50-204ENST00000493161 MYMXA0A1B0GTQ4 84 aa7.39□□□□□ -1.23
SAMM50-204ENST00000493161 LINC00587B1AMM8 73 aa7.38□□□□□ -1.23
SAMM50-204ENST00000493161 IGLV6-57P01721 117 aa7.38□□□□□ -1.23
SAMM50-204ENST00000493161 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
SAMM50-204ENST00000493161 RHEBQ15382 184 aa7.37□□□□□ -1.23
SAMM50-204ENST00000493161 C10orf91Q5T1B1 145 aa7.37□□□□□ -1.23
SAMM50-204ENST00000493161 EIF4EBP3O60516 100 aaPredicted RBP7.36□□□□□ -1.23
SAMM50-204ENST00000493161 IFITM2Q01629 132 aa7.36□□□□□ -1.23
SAMM50-204ENST00000493161 S100A7L2Q5SY68 101 aa7.36□□□□□ -1.23
SAMM50-204ENST00000493161 SPANXB1Q9NS25 103 aaPredicted RBP7.36□□□□□ -1.23
SAMM50-204ENST00000493161 TRAV23DV6A0A075B6W5 121 aa7.35□□□□□ -1.23
SAMM50-204ENST00000493161 H0Y8G0 127 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms