RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 TRAV12-1A0A0B4J245 112 aa11.49□□□□□ -0.57
RFC2-210ENST00000493156 TMEM238C9JI98 176 aa11.49□□□□□ -0.57
RFC2-210ENST00000493156 M0R378 163 aa11.49□□□□□ -0.57
RFC2-210ENST00000493156 PRLHP81277 87 aa11.49□□□□□ -0.57
RFC2-210ENST00000493156 CHCHD1Q96BP2 118 aaKnown RBP11.49□□□□□ -0.57
RFC2-210ENST00000493156 TMEM223A0PJW6 202 aa11.48□□□□□ -0.57
RFC2-210ENST00000493156 FAM19A1Q7Z5A9 133 aa11.48□□□□□ -0.57
RFC2-210ENST00000493156 IFI27L1Q96BM0 104 aa11.46□□□□□ -0.57
RFC2-210ENST00000493156 LINC00158P58513 81 aa11.44□□□□□ -0.58
RFC2-210ENST00000493156 LINC00304Q8N9R0 145 aa11.43□□□□□ -0.58
RFC2-210ENST00000493156 PLEKHB2Q96CS7 222 aa11.42□□□□□ -0.58
RFC2-210ENST00000493156 IGKV2D-26A0A0A0MRZ7 120 aa11.41□□□□□ -0.58
RFC2-210ENST00000493156 CTAG1AP78358 180 aa11.4□□□□□ -0.58
RFC2-210ENST00000493156 CBLN2Q8IUK8 224 aa11.4□□□□□ -0.58
RFC2-210ENST00000493156 A0A0U1RRA0 63 aa11.39□□□□□ -0.59
RFC2-210ENST00000493156 HSBP1O75506 76 aa11.38□□□□□ -0.59
RFC2-210ENST00000493156 SMIM13P0DJ93 91 aa11.38□□□□□ -0.59
RFC2-210ENST00000493156 HERV-K104P63124 156 aa11.38□□□□□ -0.59
RFC2-210ENST00000493156 MUC2Q02817 5179 aa11.37□□□□□ -0.59
RFC2-210ENST00000493156 HIGD2AQ9BW72 106 aa11.37□□□□□ -0.59
RFC2-210ENST00000493156 PRYO14603 147 aa11.36□□□□□ -0.59
RFC2-210ENST00000493156 MEIG1Q5JSS6 88 aa11.36□□□□□ -0.59
RFC2-210ENST00000493156 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
RFC2-210ENST00000493156 MIR7-3HGQ8N6C7 128 aa11.36□□□□□ -0.59
RFC2-210ENST00000493156 SPRR1AP35321 89 aa11.35□□□□□ -0.59
RFC2-210ENST00000493156 BOD1L2Q8IYS8 172 aa11.35□□□□□ -0.59
RFC2-210ENST00000493156 SPRR4Q96PI1 79 aa11.35□□□□□ -0.59
RFC2-210ENST00000493156 RETNLBQ9BQ08 111 aa11.35□□□□□ -0.59
RFC2-210ENST00000493156 LINC00587B1AMM8 73 aa11.34□□□□□ -0.59
RFC2-210ENST00000493156 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
RFC2-210ENST00000493156 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
RFC2-210ENST00000493156 ATP6V1G1O75348 118 aa11.33□□□□□ -0.6
RFC2-210ENST00000493156 LINC00310P59036 64 aa11.33□□□□□ -0.6
RFC2-210ENST00000493156 LINC00337Q8N6G1 96 aa11.33□□□□□ -0.6
RFC2-210ENST00000493156 KCNQ1DNQ9H478 68 aa11.33□□□□□ -0.6
RFC2-210ENST00000493156 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
RFC2-210ENST00000493156 KRTAP4-16G5E9R7 235 aaPredicted RBP11.31□□□□□ -0.6
RFC2-210ENST00000493156 NCR3O14931 201 aa11.31□□□□□ -0.6
RFC2-210ENST00000493156 TRGC2P03986 189 aa11.31□□□□□ -0.6
RFC2-210ENST00000493156 ZNF706Q9Y5V0 76 aaPredicted RBP11.31□□□□□ -0.6
RFC2-210ENST00000493156 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
RFC2-210ENST00000493156 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
RFC2-210ENST00000493156 TPRXLQ17RH7 258 aa11.3□□□□□ -0.6
RFC2-210ENST00000493156 MAP1LC3CQ9BXW4 147 aa11.3□□□□□ -0.6
RFC2-210ENST00000493156 SERF1AO75920 110 aa11.29□□□□□ -0.6
RFC2-210ENST00000493156 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
RFC2-210ENST00000493156 H0Y8G0 127 aa11.28□□□□□ -0.6
RFC2-210ENST00000493156 LEPROTO15243 131 aa11.28□□□□□ -0.6
RFC2-210ENST00000493156 PLNP26678 52 aa11.28□□□□□ -0.6
RFC2-210ENST00000493156 SPAG11AQ6PDA7 123 aa11.28□□□□□ -0.6
RFC2-210ENST00000493156 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
RFC2-210ENST00000493156 TRBV10-3A0A0K0K1G6 114 aa11.27□□□□□ -0.61
RFC2-210ENST00000493156 MUC17Q685J3 4493 aa11.26□□□□□ -0.61
RFC2-210ENST00000493156 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
RFC2-210ENST00000493156 A0A0U1RQV1 116 aa11.25□□□□□ -0.61
RFC2-210ENST00000493156 ETDCA0A1B0GVM5 59 aa11.25□□□□□ -0.61
RFC2-210ENST00000493156 SMCR5Q8TEV8 140 aa11.25□□□□□ -0.61
RFC2-210ENST00000493156 HSPB8Q9UJY1 196 aa11.24□□□□□ -0.61
RFC2-210ENST00000493156 TRBV10-2A0A0K0K1G8 114 aa11.23□□□□□ -0.61
RFC2-210ENST00000493156 J3QQQ9 107 aa11.23□□□□□ -0.61
RFC2-210ENST00000493156 DPM2O94777 84 aa11.23□□□□□ -0.61
RFC2-210ENST00000493156 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
RFC2-210ENST00000493156 DAND5Q8N907 189 aa11.23□□□□□ -0.61
RFC2-210ENST00000493156 NMUP48645 174 aa11.22□□□□□ -0.61
RFC2-210ENST00000493156 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
RFC2-210ENST00000493156 B5MCH6 92 aa11.21□□□□□ -0.61
RFC2-210ENST00000493156 HERVK_113P61574 105 aa11.21□□□□□ -0.61
RFC2-210ENST00000493156 S100A12P80511 92 aa11.21□□□□□ -0.61
RFC2-210ENST00000493156 Q8NBF4 154 aa11.2□□□□□ -0.62
RFC2-210ENST00000493156 IGKCP01834 107 aa11.19□□□□□ -0.62
RFC2-210ENST00000493156 FABP4P15090 132 aa11.19□□□□□ -0.62
RFC2-210ENST00000493156 DDTP30046 118 aa11.19□□□□□ -0.62
RFC2-210ENST00000493156 FP248Q71RG6 208 aaPredicted RBP11.19□□□□□ -0.62
RFC2-210ENST00000493156 PMCHL2Q9BQD1 86 aa11.19□□□□□ -0.62
RFC2-210ENST00000493156 PPDPFQ9H3Y8 114 aa11.19□□□□□ -0.62
RFC2-210ENST00000493156 SPANXB1Q9NS25 103 aaPredicted RBP11.19□□□□□ -0.62
RFC2-210ENST00000493156 COLCA2A8K830 154 aa11.18□□□□□ -0.62
RFC2-210ENST00000493156 NDUFC2O95298 119 aa11.18□□□□□ -0.62
RFC2-210ENST00000493156 LGALS3P17931 250 aaKnown RBP11.17□□□□□ -0.62
RFC2-210ENST00000493156 C4orf48Q5BLP8 95 aa11.17□□□□□ -0.62
RFC2-210ENST00000493156 ERC2-IT1O76042 136 aa11.16□□□□□ -0.62
RFC2-210ENST00000493156 Q6ZRX8 168 aa11.16□□□□□ -0.62
RFC2-210ENST00000493156 MIEN1Q9BRT3 115 aa11.16□□□□□ -0.62
RFC2-210ENST00000493156 IGLV6-57P01721 117 aa11.15□□□□□ -0.62
RFC2-210ENST00000493156 Q9BRP9 147 aa11.15□□□□□ -0.62
RFC2-210ENST00000493156 SPINK1P00995 79 aa11.14□□□□□ -0.63
RFC2-210ENST00000493156 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
RFC2-210ENST00000493156 FAT4Q6V0I7 4981 aa11.14□□□□□ -0.63
RFC2-210ENST00000493156 SOSTDC1Q6X4U4 206 aa11.13□□□□□ -0.63
RFC2-210ENST00000493156 SLC7A5P1Q8MH63 180 aa11.13□□□□□ -0.63
RFC2-210ENST00000493156 A0A0J9YXY3 114 aa11.12□□□□□ -0.63
RFC2-210ENST00000493156 E9PLD3 99 aa11.12□□□□□ -0.63
RFC2-210ENST00000493156 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
RFC2-210ENST00000493156 S100A7L2Q5SY68 101 aa11.11□□□□□ -0.63
RFC2-210ENST00000493156 TRAV23DV6A0A075B6W5 121 aa11.1□□□□□ -0.63
RFC2-210ENST00000493156 EIF4EBP3O60516 100 aaPredicted RBP11.1□□□□□ -0.63
RFC2-210ENST00000493156 RPS29P62273 56 aaKnown RBP11.1□□□□□ -0.63
RFC2-210ENST00000493156 ADAMTSL4-AS1Q5T5F5 129 aa11.1□□□□□ -0.63
RFC2-210ENST00000493156 MOBPQ13875 183 aa11.09□□□□□ -0.63
RFC2-210ENST00000493156 KRTAP13-3Q3SY46 172 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms