RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 C1orf137Q5JT78 98 aa8.65□□□□□ -1.02
CCM2-217ENST00000492883 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
CCM2-217ENST00000492883 NKAPP1Q8N9T2 125 aa8.65□□□□□ -1.02
CCM2-217ENST00000492883 HIST1H2BLQ99880 126 aa8.65□□□□□ -1.02
CCM2-217ENST00000492883 RPL24P83731 157 aaKnown RBP8.64□□□□□ -1.03
CCM2-217ENST00000492883 TP73-AS1Q9UF72 201 aa8.64□□□□□ -1.03
CCM2-217ENST00000492883 AKR1D1P51857 326 aa8.63□□□□□ -1.03
CCM2-217ENST00000492883 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
CCM2-217ENST00000492883 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
CCM2-217ENST00000492883 ATOH7Q8N100 152 aa8.62□□□□□ -1.03
CCM2-217ENST00000492883 IGLV5-37A0A075B6J1 123 aa8.61□□□□□ -1.03
CCM2-217ENST00000492883 GAGE10A6NGK3 116 aa8.61□□□□□ -1.03
CCM2-217ENST00000492883 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
CCM2-217ENST00000492883 LINC00167Q96N53 147 aa8.61□□□□□ -1.03
CCM2-217ENST00000492883 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
CCM2-217ENST00000492883 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
CCM2-217ENST00000492883 VPREB1P12018 145 aa8.6□□□□□ -1.03
CCM2-217ENST00000492883 SPINK6Q6UWN8 80 aa8.6□□□□□ -1.03
CCM2-217ENST00000492883 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
CCM2-217ENST00000492883 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
CCM2-217ENST00000492883 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCM2-217ENST00000492883 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
CCM2-217ENST00000492883 DAND5Q8N907 189 aa8.59□□□□□ -1.03
CCM2-217ENST00000492883 PCLOQ9Y6V0 5065 aa8.58□□□□□ -1.04
CCM2-217ENST00000492883 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
CCM2-217ENST00000492883 IGLV7-43P04211 117 aa8.58□□□□□ -1.04
CCM2-217ENST00000492883 VPS13BQ7Z7G8 4022 aa8.57□□□□□ -1.04
CCM2-217ENST00000492883 J3QL48 77 aa8.57□□□□□ -1.04
CCM2-217ENST00000492883 Q8NDZ9 215 aa8.57□□□□□ -1.04
CCM2-217ENST00000492883 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
CCM2-217ENST00000492883 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
CCM2-217ENST00000492883 OXTP01178 125 aa8.56□□□□□ -1.04
CCM2-217ENST00000492883 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
CCM2-217ENST00000492883 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
CCM2-217ENST00000492883 HSBP1L1C9JCN9 74 aa8.55□□□□□ -1.04
CCM2-217ENST00000492883 SCGB1D1O95968 90 aa8.55□□□□□ -1.04
CCM2-217ENST00000492883 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
CCM2-217ENST00000492883 TTTY13Q9BZ97 58 aa8.55□□□□□ -1.04
CCM2-217ENST00000492883 M0R378 163 aa8.54□□□□□ -1.04
CCM2-217ENST00000492883 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
CCM2-217ENST00000492883 REG3GQ6UW15 175 aa8.54□□□□□ -1.04
CCM2-217ENST00000492883 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
CCM2-217ENST00000492883 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 NCR3O14931 201 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 BCE1O60756 84 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 NPC2P61916 151 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
CCM2-217ENST00000492883 SCGB1D4Q6XE38 83 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 DIRC1Q969H9 104 aa8.53□□□□□ -1.04
CCM2-217ENST00000492883 TIMM17BO60830 172 aa8.52□□□□□ -1.05
CCM2-217ENST00000492883 ZNF861PO60384 105 aa8.51□□□□□ -1.05
CCM2-217ENST00000492883 RPL28P46779 137 aaKnown RBP8.5□□□□□ -1.05
CCM2-217ENST00000492883 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
CCM2-217ENST00000492883 LITAFQ99732 161 aa8.5□□□□□ -1.05
CCM2-217ENST00000492883 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
CCM2-217ENST00000492883 H0Y9J4 135 aa8.49□□□□□ -1.05
CCM2-217ENST00000492883 UBE2AP49459 152 aa8.49□□□□□ -1.05
CCM2-217ENST00000492883 SOSTDC1Q6X4U4 206 aa8.49□□□□□ -1.05
CCM2-217ENST00000492883 TMEM126AQ9H061 195 aa8.49□□□□□ -1.05
CCM2-217ENST00000492883 TMA7Q9Y2S6 64 aaKnown RBP8.49□□□□□ -1.05
CCM2-217ENST00000492883 NDUFC2O95298 119 aa8.48□□□□□ -1.05
CCM2-217ENST00000492883 LINC00308Q8TCZ7 52 aa8.48□□□□□ -1.05
CCM2-217ENST00000492883 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
CCM2-217ENST00000492883 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
CCM2-217ENST00000492883 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
CCM2-217ENST00000492883 S100A12P80511 92 aa8.47□□□□□ -1.05
CCM2-217ENST00000492883 FAM19A1Q7Z5A9 133 aa8.47□□□□□ -1.05
CCM2-217ENST00000492883 LINC01600Q96MT4 127 aa8.47□□□□□ -1.05
CCM2-217ENST00000492883 FLG2Q5D862 2391 aaPredicted RBP8.47□□□□□ -1.05
CCM2-217ENST00000492883 TRBV10-3A0A0K0K1G6 114 aa8.46□□□□□ -1.06
CCM2-217ENST00000492883 S100A7L2Q5SY68 101 aa8.46□□□□□ -1.06
CCM2-217ENST00000492883 PRYO14603 147 aa8.45□□□□□ -1.06
CCM2-217ENST00000492883 DDTP30046 118 aa8.45□□□□□ -1.06
CCM2-217ENST00000492883 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
CCM2-217ENST00000492883 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
CCM2-217ENST00000492883 PRLHP81277 87 aa8.44□□□□□ -1.06
CCM2-217ENST00000492883 COPS9Q8WXC6 57 aa8.44□□□□□ -1.06
CCM2-217ENST00000492883 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
CCM2-217ENST00000492883 JOSD1Q15040 202 aaPredicted RBP8.43□□□□□ -1.06
CCM2-217ENST00000492883 Q6ZVH6 145 aa8.43□□□□□ -1.06
CCM2-217ENST00000492883 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
CCM2-217ENST00000492883 IFITM1P13164 125 aa8.42□□□□□ -1.06
CCM2-217ENST00000492883 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
CCM2-217ENST00000492883 ETDCA0A1B0GVM5 59 aa8.41□□□□□ -1.06
CCM2-217ENST00000492883 OR13C6PQ8NH95 151 aa8.41□□□□□ -1.06
CCM2-217ENST00000492883 IGLV6-57P01721 117 aa8.4□□□□□ -1.06
CCM2-217ENST00000492883 SPRR1AP35321 89 aa8.4□□□□□ -1.06
CCM2-217ENST00000492883 MUSTN1Q8IVN3 82 aa8.4□□□□□ -1.06
CCM2-217ENST00000492883 LINC00518Q8N0U6 118 aa8.4□□□□□ -1.06
CCM2-217ENST00000492883 LINC00337Q8N6G1 96 aa8.4□□□□□ -1.06
CCM2-217ENST00000492883 PAM16Q9Y3D7 125 aa8.4□□□□□ -1.06
CCM2-217ENST00000492883 KRTAP1-4P0C5Y4 121 aa8.39□□□□□ -1.07
CCM2-217ENST00000492883 KRTAP10-8P60410 259 aa8.39□□□□□ -1.07
CCM2-217ENST00000492883 SPATA45Q537H7 98 aa8.39□□□□□ -1.07
CCM2-217ENST00000492883 VAMP8Q9BV40 100 aa8.39□□□□□ -1.07
CCM2-217ENST00000492883 HIGD2AQ9BW72 106 aa8.39□□□□□ -1.07
CCM2-217ENST00000492883 CBY1Q9Y3M2 126 aa8.39□□□□□ -1.07
CCM2-217ENST00000492883 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms