RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 SNHG12Q9BXW3 62 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 ABCC10Q5T3U5 1492 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 CCDC141Q6ZP82 1450 aa-0.24□□□□□ -2.45
CLK1-213ENST00000492793 TARBP1Q13395 1621 aaKnown RBP-0.24□□□□□ -2.45
CLK1-213ENST00000492793 KMT2CQ8NEZ4 4911 aaKnown RBP-0.25□□□□□ -2.45
CLK1-213ENST00000492793 MUC2Q02817 5179 aa-0.25□□□□□ -2.45
CLK1-213ENST00000492793 SPRR2BP35325 72 aa-0.25□□□□□ -2.45
CLK1-213ENST00000492793 KRTAP6-1Q3LI64 71 aa-0.25□□□□□ -2.45
CLK1-213ENST00000492793 ETDBQ3ZM63 59 aa-0.25□□□□□ -2.45
CLK1-213ENST00000492793 H1FX-AS1Q4G0G2 97 aa-0.25□□□□□ -2.45
CLK1-213ENST00000492793 ZNF720Q7Z2F6 126 aa-0.25□□□□□ -2.45
CLK1-213ENST00000492793 ABCC2Q92887 1545 aa-0.25□□□□□ -2.45
CLK1-213ENST00000492793 SHPRHQ149N8 1683 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 VPS8Q8N3P4 1428 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 D6R8Y8 96 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 M0R2T5 61 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 LEPROTL1O95214 131 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 S100A8P05109 93 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 ALKAL2Q6UX46 152 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 MUSTN1Q8IVN3 82 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 HIGD1BQ9P298 99 aa-0.26□□□□□ -2.45
CLK1-213ENST00000492793 IGLC2P0DOY2 106 aa-0.27□□□□□ -2.45
CLK1-213ENST00000492793 IGLC3P0DOY3 106 aa-0.27□□□□□ -2.45
CLK1-213ENST00000492793 PKIAP61925 76 aa-0.27□□□□□ -2.45
CLK1-213ENST00000492793 SAMD9Q5K651 1589 aa-0.28□□□□□ -2.45
CLK1-213ENST00000492793 ACANP16112 2415 aa-0.28□□□□□ -2.45
CLK1-213ENST00000492793 MRPL34Q9BQ48 92 aaKnown RBP-0.28□□□□□ -2.45
CLK1-213ENST00000492793 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
CLK1-213ENST00000492793 LRRC37AA6NMS7 1700 aa-0.29□□□□□ -2.46
CLK1-213ENST00000492793 MON2Q7Z3U7 1717 aa-0.29□□□□□ -2.46
CLK1-213ENST00000492793 DEFB112Q30KQ8 113 aa-0.29□□□□□ -2.46
CLK1-213ENST00000492793 C20orf78Q9BR46 151 aa-0.29□□□□□ -2.46
CLK1-213ENST00000492793 SETXQ7Z333 2677 aaKnown RBP-0.29□□□□□ -2.46
CLK1-213ENST00000492793 IQSEC2Q5JU85 1478 aa-0.29□□□□□ -2.46
CLK1-213ENST00000492793 SPTY2D1-AS1A0A0U1RR47 76 aa-0.3□□□□□ -2.46
CLK1-213ENST00000492793 LELP1Q5T871 98 aa-0.3□□□□□ -2.46
CLK1-213ENST00000492793 CNOT1A5YKK6 2376 aaKnown RBP-0.3□□□□□ -2.46
CLK1-213ENST00000492793 CUX1P39880 1505 aa-0.3□□□□□ -2.46
CLK1-213ENST00000492793 C5P01031 1676 aa-0.3□□□□□ -2.46
CLK1-213ENST00000492793 FLNBO75369 2602 aaKnown RBP-0.31□□□□□ -2.46
CLK1-213ENST00000492793 TENM2Q9NT68 2774 aa-0.31□□□□□ -2.46
CLK1-213ENST00000492793 EPRSP07814 1512 aaKnown RBP-0.31□□□□□ -2.46
CLK1-213ENST00000492793 GYPAP02724 150 aa-0.31□□□□□ -2.46
CLK1-213ENST00000492793 UBE2D4Q9Y2X8 147 aa-0.31□□□□□ -2.46
CLK1-213ENST00000492793 COL6A3P12111 3177 aa-0.31□□□□□ -2.46
CLK1-213ENST00000492793 KIAA1551Q9HCM1 1747 aa-0.32□□□□□ -2.46
CLK1-213ENST00000492793 MYH4Q9Y623 1939 aa-0.32□□□□□ -2.46
CLK1-213ENST00000492793 USH2AO75445 5202 aa-0.32□□□□□ -2.46
CLK1-213ENST00000492793 CLTCQ00610 1675 aaKnown RBP-0.32□□□□□ -2.46
CLK1-213ENST00000492793 FANCAO15360 1455 aa-0.32□□□□□ -2.46
CLK1-213ENST00000492793 ATP10BO94823 1461 aa-0.32□□□□□ -2.46
CLK1-213ENST00000492793 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.33□□□□□ -2.464e-7■■□□□ 11.7
CLK1-213ENST00000492793 CCL22O00626 93 aa-0.33□□□□□ -2.46
CLK1-213ENST00000492793 HMGN2P05204 90 aaKnown RBP-0.33□□□□□ -2.46
CLK1-213ENST00000492793 HEPN1Q6WQI6 88 aa-0.33□□□□□ -2.46
CLK1-213ENST00000492793 ANKRD26Q9UPS8 1709 aa-0.33□□□□□ -2.46
CLK1-213ENST00000492793 CRYBG1Q9Y4K1 1723 aa-0.33□□□□□ -2.46
CLK1-213ENST00000492793 RYR3Q15413 4870 aa-0.33□□□□□ -2.46
CLK1-213ENST00000492793 CLIP1P30622 1438 aa-0.34□□□□□ -2.46
CLK1-213ENST00000492793 SMIM11AP58511 58 aa-0.34□□□□□ -2.46
CLK1-213ENST00000492793 DEFB135Q30KP9 77 aa-0.34□□□□□ -2.46
CLK1-213ENST00000492793 PCNX1Q96RV3 2341 aa-0.34□□□□□ -2.46
CLK1-213ENST00000492793 UBR4Q5T4S7 5183 aa-0.34□□□□□ -2.46
CLK1-213ENST00000492793 KIAA1109Q2LD37 5005 aa-0.34□□□□□ -2.46
CLK1-213ENST00000492793 CCNB3Q8WWL7 1395 aa-0.34□□□□□ -2.46
CLK1-213ENST00000492793 KIF20BQ96Q89 1820 aa-0.35□□□□□ -2.47
CLK1-213ENST00000492793 PEA15Q15121 130 aa-0.35□□□□□ -2.47
CLK1-213ENST00000492793 NMSQ5H8A3 153 aa-0.35□□□□□ -2.47
CLK1-213ENST00000492793 C9orf62Q8N4C0 152 aa-0.35□□□□□ -2.47
CLK1-213ENST00000492793 CDKN2A-AS1Q9UH64 79 aa-0.35□□□□□ -2.47
CLK1-213ENST00000492793 AKAP12Q02952 1782 aa-0.35□□□□□ -2.47
CLK1-213ENST00000492793 KNL1Q8NG31 2342 aa-0.36□□□□□ -2.47
CLK1-213ENST00000492793 SRRM2Q9UQ35 2752 aaKnown RBP-0.36□□□□□ -2.47
CLK1-213ENST00000492793 NEXMIFQ5QGS0 1516 aa-0.36□□□□□ -2.47
CLK1-213ENST00000492793 COX7BP24311 80 aa-0.36□□□□□ -2.47
CLK1-213ENST00000492793 WFDC13Q8IUB5 93 aa-0.36□□□□□ -2.47
CLK1-213ENST00000492793 MAGI2Q86UL8 1455 aa-0.36□□□□□ -2.47
CLK1-213ENST00000492793 COL14A1Q05707 1796 aaKnown RBP-0.37□□□□□ -2.47
CLK1-213ENST00000492793 PLGLAQ15195 96 aa-0.37□□□□□ -2.47
CLK1-213ENST00000492793 PYY3Q5JQD4 70 aa-0.37□□□□□ -2.47
CLK1-213ENST00000492793 TROQ12816 1431 aaPredicted RBP-0.38□□□□□ -2.47
CLK1-213ENST00000492793 RYR1P21817 5038 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 PKHD1P08F94 4074 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 A0A1B0GUT8 65 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 IQCF6A8MYZ5 107 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 KRTAP19-7Q3SYF9 63 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 Q9H521 79 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 UBR3Q6ZT12 1888 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 HERC1Q15751 4861 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 CEP162Q5TB80 1403 aa-0.38□□□□□ -2.47
CLK1-213ENST00000492793 HYDINQ4G0P3 5121 aa-0.39□□□□□ -2.47
CLK1-213ENST00000492793 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.39□□□□□ -2.47
CLK1-213ENST00000492793 SVEP1Q4LDE5 3571 aa-0.39□□□□□ -2.47
CLK1-213ENST00000492793 RNF213Q63HN8 5207 aa-0.39□□□□□ -2.47
CLK1-213ENST00000492793 RGPD2P0DJD1 1756 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 BCORQ6W2J9 1755 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 ATP7BP35670 1465 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 PKD1L3Q7Z443 1732 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 K7EP34 96 aa-0.4□□□□□ -2.47
CLK1-213ENST00000492793 KRTAP6-2Q3LI66 62 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms