RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 IGSF23A1L1A6 192 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 IFITM5A6NNB3 132 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 CEBPZOSA8MTT3 80 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 PLA2G10O15496 165 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 SSNA1O43805 119 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 HIST1H1EP10412 219 aaKnown RBP1.45□□□□□ -2.18
UBR4-215ENST00000492606 S100A11P31949 105 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 AKR1C2P52895 323 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 FABP5Q01469 135 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 TMEM97Q5BJF2 176 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 UNQ6190/PRO20217Q6UXQ8 127 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 SCGB1D4Q6XE38 83 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 SSBP3-AS1Q7Z2R9 100 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 SLC51BQ86UW2 128 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 BPIFA4PQ86YQ2 179 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 SMIM4Q8WVI0 70 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 PACRGQ96M98 296 aaPredicted RBP1.45□□□□□ -2.18
UBR4-215ENST00000492606 PRRT1Q99946 306 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 C11orf1Q9H5F2 150 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 IL36BQ9NZH7 164 aa1.45□□□□□ -2.18
UBR4-215ENST00000492606 LINC00959A0A1B0GUT2 108 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 DISC1C4P0D8 188 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 NDUFB6O95139 128 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 AKAIN1P0CW23 69 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 SULT1A3P0DMM9 295 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 SULT1A4P0DMN0 295 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 CDC34P49427 236 aaPredicted RBP1.44□□□□□ -2.18
UBR4-215ENST00000492606 NKX2-5P52952 324 aaPredicted RBP1.44□□□□□ -2.18
UBR4-215ENST00000492606 HERVK_113P63121 156 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 IFITM2Q01629 132 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 ZNF345Q14585 488 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 MRPL51Q4U2R6 128 aaKnown RBP1.44□□□□□ -2.18
UBR4-215ENST00000492606 TMEM91Q6ZNR0 172 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 LINC00305Q7Z4B0 112 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 TMEM229BQ8NBD8 167 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 TP53RKQ96S44 253 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 CACFD1Q9UGQ2 172 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 HSPB11Q9Y547 144 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 ALG5Q9Y673 324 aa1.44□□□□□ -2.18
UBR4-215ENST00000492606 TRBV19A0A075B6N1 114 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 TRAV21A0A0B4J279 112 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 KANTRA0A1W2PQU2 76 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 F6UZH7 168 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 SYNGR2O43760 224 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 LINC00614P0C842 121 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 S100GP29377 79 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 S100A12P80511 92 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 TMEM128Q5BJH2 165 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 CYP2G1PQ6ZSU1 146 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 ATP5L2Q7Z4Y8 100 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 SVBPQ8N300 66 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 C9orf62Q8N4C0 152 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 C12orf45Q8N5I9 185 aaPredicted RBP1.43□□□□□ -2.18
UBR4-215ENST00000492606 CMTM2Q8TAZ6 248 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 SFRP2Q96HF1 295 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 TCEAL7Q9BRU2 100 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 NMES1Q9C002 83 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 PRELID1Q9Y255 219 aa1.43□□□□□ -2.18
UBR4-215ENST00000492606 TMEM218A2RU14 115 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 SDHAF1A6NFY7 115 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 UMAD1C9J7I0 102 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 G3V3Q6 166 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 S100A8P05109 93 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 TPT1P13693 172 aaKnown RBP1.42□□□□□ -2.18
UBR4-215ENST00000492606 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 SMCO1Q147U7 214 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 RNASE10Q5GAN6 216 aaKnown RBP1.42□□□□□ -2.18
UBR4-215ENST00000492606 KCNRGQ8N5I3 272 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 OR5H6Q8NGV6 325 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 TERB2Q8NHR7 220 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 BTF3L4Q96K17 158 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 HIGD2AQ9BW72 106 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 ATG5Q9H1Y0 275 aa1.42□□□□□ -2.18
UBR4-215ENST00000492606 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.42□□□□□ -2.18
UBR4-215ENST00000492606 BORCS7-ASMTA0A0B4J1R7 106 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 M0R381 172 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 IGKV4-1P06312 121 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 TSPEAR-AS2P59090 65 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 PPP1R1AQ13522 171 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 PEA15Q15121 130 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 C1orf195Q5TG92 126 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 COMMD7Q86VX2 200 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 SNX29P2Q8IUI4 249 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.41□□□□□ -2.18
UBR4-215ENST00000492606 ZNF471Q9BX82 626 aaPredicted RBP1.41□□□□□ -2.18
UBR4-215ENST00000492606 SEC11CQ9BY50 192 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 XAGE1AQ9HD64 81 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 BIN3Q9NQY0 253 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 SMCO4Q9NRQ5 59 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 SPANXB1Q9NS25 103 aaPredicted RBP1.41□□□□□ -2.18
UBR4-215ENST00000492606 PRO2289Q9P1D8 64 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 TNFSF18Q9UNG2 199 aa1.41□□□□□ -2.18
UBR4-215ENST00000492606 LOC105371267A0A1B0GV96 52 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 C9orf170A2RU37 121 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 TMEM238C9JI98 176 aa1.4□□□□□ -2.19
UBR4-215ENST00000492606 NDUFA1O15239 70 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms