RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 C20orf78Q9BR46 151 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 SMIM2Q9BVW6 85 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 MANBALQ9NQG1 85 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 GNG13Q9P2W3 67 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 CDKN2A-AS1Q9UH64 79 aa3.61□□□□□ -1.83
PDLIM1-203ENST00000490391 A8MWL6 223 aa3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 RAB5BP61020 215 aa3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 MRPL51Q4U2R6 128 aaKnown RBP3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 GAGE2AQ6NT46 116 aa3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 OCC1Q8TAD7 63 aa3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 EIF5A2Q9GZV4 153 aaKnown RBP3.6□□□□□ -1.83
PDLIM1-203ENST00000490391 HIGD1CA8MV81 97 aa3.59□□□□□ -1.83
PDLIM1-203ENST00000490391 UMAD1C9J7I0 102 aa3.59□□□□□ -1.83
PDLIM1-203ENST00000490391 GATCO43716 136 aaKnown RBP3.59□□□□□ -1.83
PDLIM1-203ENST00000490391 TEX43Q6ZNM6 134 aa3.59□□□□□ -1.83
PDLIM1-203ENST00000490391 FAM231DQ6ZW35 169 aa3.59□□□□□ -1.83
PDLIM1-203ENST00000490391 AMELXQ99217 191 aa3.59□□□□□ -1.83
PDLIM1-203ENST00000490391 MED9Q9NWA0 146 aa3.59□□□□□ -1.83
PDLIM1-203ENST00000490391 FXYD6-FXYD2A0A087WZ82 144 aa3.58□□□□□ -1.84
PDLIM1-203ENST00000490391 SMIM1B2RUZ4 78 aa3.58□□□□□ -1.84
PDLIM1-203ENST00000490391 PDE6DO43924 150 aa3.58□□□□□ -1.84
PDLIM1-203ENST00000490391 SPRR1AP35321 89 aa3.58□□□□□ -1.84
PDLIM1-203ENST00000490391 C2orf66Q6UXQ4 117 aa3.58□□□□□ -1.84
PDLIM1-203ENST00000490391 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
PDLIM1-203ENST00000490391 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 ERC2-IT1O76042 136 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 GIPP09681 153 aaPredicted RBP3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 FAM104BQ5XKR9 115 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 AKAP14Q86UN6 197 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 BORCS7Q96B45 105 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 TIMM17AQ99595 171 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 C2orf88Q9BSF0 95 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 SND1-IT1Q9HBX3 110 aa3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 CHTOPQ9Y3Y2 248 aaKnown RBP3.57□□□□□ -1.84
PDLIM1-203ENST00000490391 LINC00862A6NCI5 91 aa3.56□□□□□ -1.84
PDLIM1-203ENST00000490391 HERVK_113P63121 156 aa3.56□□□□□ -1.84
PDLIM1-203ENST00000490391 RPL24P83731 157 aaKnown RBP3.56□□□□□ -1.84
PDLIM1-203ENST00000490391 COX7B2Q8TF08 81 aa3.56□□□□□ -1.84
PDLIM1-203ENST00000490391 LIMD2Q9BT23 127 aa3.56□□□□□ -1.84
PDLIM1-203ENST00000490391 C20orf202A1L168 122 aa3.55□□□□□ -1.84
PDLIM1-203ENST00000490391 PRSS47A8MTI9 375 aa3.55□□□□□ -1.84
PDLIM1-203ENST00000490391 NPYP01303 97 aa3.55□□□□□ -1.84
PDLIM1-203ENST00000490391 LGALS3P17931 250 aaKnown RBP3.55□□□□□ -1.84
PDLIM1-203ENST00000490391 RAB14P61106 215 aa3.55□□□□□ -1.84
PDLIM1-203ENST00000490391 ARPC5O15511 151 aa3.54□□□□□ -1.84
PDLIM1-203ENST00000490391 CKS2P33552 79 aa3.54□□□□□ -1.84
PDLIM1-203ENST00000490391 PFN2P35080 140 aa3.54□□□□□ -1.84
PDLIM1-203ENST00000490391 RIGQ13278 110 aa3.54□□□□□ -1.84
PDLIM1-203ENST00000490391 KIAA1644Q3SXP7 199 aa3.54□□□□□ -1.84
PDLIM1-203ENST00000490391 PDZD11Q5EBL8 140 aa3.54□□□□□ -1.84
PDLIM1-203ENST00000490391 VCX2Q9H322 139 aa3.54□□□□□ -1.84
PDLIM1-203ENST00000490391 IGIPA6NJ69 53 aa3.53□□□□□ -1.84
PDLIM1-203ENST00000490391 D6R8Y8 96 aa3.53□□□□□ -1.84
PDLIM1-203ENST00000490391 C9orf153Q5TBE3 101 aa3.53□□□□□ -1.84
PDLIM1-203ENST00000490391 IGLV5-45A0A087WSX0 123 aa3.52□□□□□ -1.85
PDLIM1-203ENST00000490391 SEC11AP67812 179 aa3.52□□□□□ -1.85
PDLIM1-203ENST00000490391 LINC00299Q6ZSB3 139 aa3.52□□□□□ -1.85
PDLIM1-203ENST00000490391 Q9BRP9 147 aa3.52□□□□□ -1.85
PDLIM1-203ENST00000490391 KCNQ1DNQ9H478 68 aa3.52□□□□□ -1.85
PDLIM1-203ENST00000490391 ETDCA0A1B0GVM5 59 aa3.51□□□□□ -1.85
PDLIM1-203ENST00000490391 ATP5LO75964 103 aa3.51□□□□□ -1.85
PDLIM1-203ENST00000490391 RAB5AP20339 215 aa3.51□□□□□ -1.85
PDLIM1-203ENST00000490391 C1orf195Q5TG92 126 aa3.51□□□□□ -1.85
PDLIM1-203ENST00000490391 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
PDLIM1-203ENST00000490391 CYSLTR1Q9Y271 337 aa3.51□□□□□ -1.85
PDLIM1-203ENST00000490391 SPINK8P0C7L1 97 aa3.5□□□□□ -1.85
PDLIM1-203ENST00000490391 S100ZQ8WXG8 99 aa3.5□□□□□ -1.85
PDLIM1-203ENST00000490391 C20orf166-AS1Q96NR2 134 aa3.5□□□□□ -1.85
PDLIM1-203ENST00000490391 ERG28Q9UKR5 140 aa3.5□□□□□ -1.85
PDLIM1-203ENST00000490391 LOC389332A0A1B0GUA5 103 aa3.49□□□□□ -1.85
PDLIM1-203ENST00000490391 SCGB1D1O95968 90 aa3.49□□□□□ -1.85
PDLIM1-203ENST00000490391 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
PDLIM1-203ENST00000490391 COX17Q14061 63 aa3.49□□□□□ -1.85
PDLIM1-203ENST00000490391 ZNF345Q14585 488 aa3.49□□□□□ -1.85
PDLIM1-203ENST00000490391 OSTCQ9NRP0 149 aa3.49□□□□□ -1.85
PDLIM1-203ENST00000490391 V9GYV3 84 aa3.49□□□□□ -1.85
PDLIM1-203ENST00000490391 IGLV5-39A0A0G2JS06 123 aa3.48□□□□□ -1.85
PDLIM1-203ENST00000490391 Q5XG85 94 aa3.48□□□□□ -1.85
PDLIM1-203ENST00000490391 TINCRA0A1B0GVN0 87 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 TMEM250H0YL14 139 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 TEX46H3BTG2 121 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 PPBPP02775 128 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 ATP11AUNQ6ZP68 121 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 Q6ZRX8 168 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 Q75L30 129 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 NAT8BQ9UHF3 227 aa3.47□□□□□ -1.85
PDLIM1-203ENST00000490391 TRAV9-1A0A075B6T8 112 aa3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 TRBV10-3A0A0K0K1G6 114 aa3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 SMLR1H3BR10 107 aa3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 TAGLN2P37802 199 aaKnown RBP3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 CD164Q04900 197 aa3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 SMIM29Q86T20 159 aa3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 ORMDL3Q8N138 153 aa3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 PRELID3AQ96N28 172 aa3.46□□□□□ -1.86
PDLIM1-203ENST00000490391 A0A1B0GW15 77 aa3.45□□□□□ -1.86
PDLIM1-203ENST00000490391 A0A1B0GXF2 115 aa3.45□□□□□ -1.86
PDLIM1-203ENST00000490391 SMIM27A0A1W2PRY6 76 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms