RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 F8WEM9 126 aa12.68□□□□□ -0.38
POLR2J3-205ENST00000489144 Q6ZRU5 148 aa12.68□□□□□ -0.38
POLR2J3-205ENST00000489144 OVOL2Q9BRP0 275 aa12.68□□□□□ -0.38
POLR2J3-205ENST00000489144 K7EQD1 137 aa12.68□□□□□ -0.38
POLR2J3-205ENST00000489144 C20orf203Q8NBC4 194 aa12.66□□□□□ -0.38
POLR2J3-205ENST00000489144 A8MZ25 164 aa12.66□□□□□ -0.38
POLR2J3-205ENST00000489144 TRBV10-3A0A0K0K1G6 114 aa12.65□□□□□ -0.38
POLR2J3-205ENST00000489144 A0A096LPF7 62 aa12.65□□□□□ -0.39
POLR2J3-205ENST00000489144 EGFEM1PQ0D2K5 195 aa12.65□□□□□ -0.39
POLR2J3-205ENST00000489144 NDUFC1O43677 76 aa12.64□□□□□ -0.39
POLR2J3-205ENST00000489144 RMI2Q96E14 147 aa12.64□□□□□ -0.39
POLR2J3-205ENST00000489144 LAMTOR3Q9UHA4 124 aa12.64□□□□□ -0.39
POLR2J3-205ENST00000489144 HTN3P15516 51 aa12.64□□□□□ -0.39
POLR2J3-205ENST00000489144 Q8NAQ8 132 aa12.64□□□□□ -0.39
POLR2J3-205ENST00000489144 ENHOQ6UWT2 76 aa12.63□□□□□ -0.39
POLR2J3-205ENST00000489144 MPLKIPQ8TAP9 179 aa12.63□□□□□ -0.39
POLR2J3-205ENST00000489144 SNURFQ9Y675 71 aa12.63□□□□□ -0.39
POLR2J3-205ENST00000489144 TRAV13-2A0A0B4J235 113 aa12.62□□□□□ -0.39
POLR2J3-205ENST00000489144 CHCHD7Q9BUK0 85 aa12.62□□□□□ -0.39
POLR2J3-205ENST00000489144 NDUFA1O15239 70 aa12.61□□□□□ -0.39
POLR2J3-205ENST00000489144 RPL36AP83881 106 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-205ENST00000489144 RPL36ALQ969Q0 106 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-205ENST00000489144 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
POLR2J3-205ENST00000489144 ZNF625Q96I27 306 aaPredicted RBP12.59□□□□□ -0.39
POLR2J3-205ENST00000489144 PAX4O43316 350 aa12.58□□□□□ -0.4
POLR2J3-205ENST00000489144 DAD1P61803 113 aa12.58□□□□□ -0.4
POLR2J3-205ENST00000489144 FAM104AQ969W3 186 aa12.58□□□□□ -0.4
POLR2J3-205ENST00000489144 NCR3O14931 201 aa12.57□□□□□ -0.4
POLR2J3-205ENST00000489144 FAM229BQ4G0N7 80 aa12.57□□□□□ -0.4
POLR2J3-205ENST00000489144 SOSTDC1Q6X4U4 206 aa12.57□□□□□ -0.4
POLR2J3-205ENST00000489144 IBA57-AS1B1ANH7 110 aa12.57□□□□□ -0.4
POLR2J3-205ENST00000489144 GYPEP15421 78 aa12.57□□□□□ -0.4
POLR2J3-205ENST00000489144 DNHD1Q96M86 4753 aa12.56□□□□□ -0.4
POLR2J3-205ENST00000489144 LINC00612Q8N6U2 182 aa12.56□□□□□ -0.4
POLR2J3-205ENST00000489144 TRBV6-4A0A1B0GX49 114 aa12.55□□□□□ -0.4
POLR2J3-205ENST00000489144 MIFP14174 115 aa12.55□□□□□ -0.4
POLR2J3-205ENST00000489144 A0A087WYN8 130 aa12.54□□□□□ -0.4
POLR2J3-205ENST00000489144 TRBV10-1A0A0K0K1A3 114 aa12.54□□□□□ -0.4
POLR2J3-205ENST00000489144 LYRM9A8MSI8 78 aa12.53□□□□□ -0.4
POLR2J3-205ENST00000489144 K7EIL1 84 aa12.52□□□□□ -0.4
POLR2J3-205ENST00000489144 COL7A1Q02388 2944 aa12.51□□□□□ -0.41
POLR2J3-205ENST00000489144 SPART-AS1P0CW21 52 aa12.51□□□□□ -0.41
POLR2J3-205ENST00000489144 H0YGX0 51 aa12.5□□□□□ -0.41
POLR2J3-205ENST00000489144 Q9H8V8 135 aa12.5□□□□□ -0.41
POLR2J3-205ENST00000489144 A0A0J9YWU9 116 aa12.5□□□□□ -0.41
POLR2J3-205ENST00000489144 MIR7-3HGQ8N6C7 128 aa12.5□□□□□ -0.41
POLR2J3-205ENST00000489144 IGKV3OR2-268A0A0C4DH90 116 aa12.49□□□□□ -0.41
POLR2J3-205ENST00000489144 UBL5Q9BZL1 73 aa12.49□□□□□ -0.41
POLR2J3-205ENST00000489144 PRO0255Q9UI72 69 aa12.49□□□□□ -0.41
POLR2J3-205ENST00000489144 HUWE1Q7Z6Z7 4374 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-205ENST00000489144 DGAT2L7PQ6IED9 249 aa12.49□□□□□ -0.41
POLR2J3-205ENST00000489144 ESRGQ1W209 222 aa12.48□□□□□ -0.41
POLR2J3-205ENST00000489144 C4orf48Q5BLP8 95 aa12.48□□□□□ -0.41
POLR2J3-205ENST00000489144 MRPL55Q7Z7F7 128 aaKnown RBP12.48□□□□□ -0.41
POLR2J3-205ENST00000489144 Q6ZTC4 211 aa12.47□□□□□ -0.41
POLR2J3-205ENST00000489144 Q8N3U1 123 aa12.47□□□□□ -0.41
POLR2J3-205ENST00000489144 TRAV10A0A0B4J240 114 aa12.46□□□□□ -0.41
POLR2J3-205ENST00000489144 UBE2L6O14933 153 aa12.46□□□□□ -0.41
POLR2J3-205ENST00000489144 CRPP02741 224 aa12.46□□□□□ -0.41
POLR2J3-205ENST00000489144 NANOS2P60321 138 aaKnown RBP12.46□□□□□ -0.42
POLR2J3-205ENST00000489144 CDKN2A-AS1Q9UH64 79 aa12.46□□□□□ -0.42
POLR2J3-205ENST00000489144 ORMDL1Q9P0S3 153 aa12.45□□□□□ -0.42
POLR2J3-205ENST00000489144 TRBV6-8A0A0A6YYG3 113 aa12.44□□□□□ -0.42
POLR2J3-205ENST00000489144 LECT2O14960 151 aa12.44□□□□□ -0.42
POLR2J3-205ENST00000489144 IGLV4-60A0A075B6I1 120 aa12.44□□□□□ -0.42
POLR2J3-205ENST00000489144 JMJD7-PLA2G4BH0Y9G9 81 aa12.44□□□□□ -0.42
POLR2J3-205ENST00000489144 CLPSL2Q6UWE3 100 aa12.43□□□□□ -0.42
POLR2J3-205ENST00000489144 C6orf223Q8N319 242 aa12.43□□□□□ -0.42
POLR2J3-205ENST00000489144 SMIM11BQ8TCY0 68 aa12.43□□□□□ -0.42
POLR2J3-205ENST00000489144 STAB2Q8WWQ8 2551 aa12.43□□□□□ -0.42
POLR2J3-205ENST00000489144 IGLV5-45A0A087WSX0 123 aa12.42□□□□□ -0.42
POLR2J3-205ENST00000489144 TRBV7-4A0A0J9YYF1 115 aa12.42□□□□□ -0.42
POLR2J3-205ENST00000489144 IGLV5-39A0A0G2JS06 123 aa12.42□□□□□ -0.42
POLR2J3-205ENST00000489144 COX6A2Q02221 97 aa12.41□□□□□ -0.42
POLR2J3-205ENST00000489144 LINC00337Q8N6G1 96 aa12.41□□□□□ -0.42
POLR2J3-205ENST00000489144 A0A087WZ39 114 aa12.39□□□□□ -0.43
POLR2J3-205ENST00000489144 SLPIP03973 132 aa12.39□□□□□ -0.43
POLR2J3-205ENST00000489144 CDC42SE2Q9NRR3 84 aa12.39□□□□□ -0.43
POLR2J3-205ENST00000489144 IGKV2-28A0A075B6P5 120 aa12.36□□□□□ -0.43
POLR2J3-205ENST00000489144 IGKV2D-28P01615 120 aa12.36□□□□□ -0.43
POLR2J3-205ENST00000489144 TM2D3Q9BRN9 247 aa12.36□□□□□ -0.43
POLR2J3-205ENST00000489144 C11orf45Q8TAV5 145 aa12.36□□□□□ -0.43
POLR2J3-205ENST00000489144 DNAH9Q9NYC9 4486 aa12.36□□□□□ -0.43
POLR2J3-205ENST00000489144 TMEM254Q8TBM7 123 aa12.35□□□□□ -0.43
POLR2J3-205ENST00000489144 LINC00242Q5T6M2 205 aa12.35□□□□□ -0.43
POLR2J3-205ENST00000489144 LYSTQ99698 3801 aa12.35□□□□□ -0.43
POLR2J3-205ENST00000489144 LINC01547P58512 204 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-205ENST00000489144 RBM12B-AS1Q9P1G2 102 aa12.34□□□□□ -0.43
POLR2J3-205ENST00000489144 Q1T7F1 81 aa12.34□□□□□ -0.43
POLR2J3-205ENST00000489144 ERC2-IT1O76042 136 aa12.33□□□□□ -0.43
POLR2J3-205ENST00000489144 MEGF8Q7Z7M0 2845 aa12.33□□□□□ -0.44
POLR2J3-205ENST00000489144 KPRPQ5T749 579 aaPredicted RBP12.33□□□□□ -0.44
POLR2J3-205ENST00000489144 C11orf68Q9H3H3 251 aaKnown RBP12.33□□□□□ -0.44
POLR2J3-205ENST00000489144 PRKDCP78527 4128 aaKnown RBP12.32□□□□□ -0.44
POLR2J3-205ENST00000489144 FUSP35637 526 aaKnown RBP eCLIP12.32□□□□□ -0.44
POLR2J3-205ENST00000489144 SND1-IT1Q9HBX3 110 aa12.32□□□□□ -0.44
POLR2J3-205ENST00000489144 DEFB131BA0A096LNP1 70 aa12.31□□□□□ -0.44
POLR2J3-205ENST00000489144 LINC00167Q96N53 147 aa12.3□□□□□ -0.44
POLR2J3-205ENST00000489144 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
POLR2J3-205ENST00000489144 SMIM1B2RUZ4 78 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms