RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 HSBP1O75506 76 aa8.32□□□□□ -1.08
VTI1A-206ENST00000489142 RPL13AP40429 203 aaKnown RBP8.32□□□□□ -1.08
VTI1A-206ENST00000489142 LINC00158P58513 81 aa8.31□□□□□ -1.08
VTI1A-206ENST00000489142 COX17Q14061 63 aa8.31□□□□□ -1.08
VTI1A-206ENST00000489142 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
VTI1A-206ENST00000489142 LPAP08519 4548 aa8.3□□□□□ -1.08
VTI1A-206ENST00000489142 LINC00310P59036 64 aa8.3□□□□□ -1.08
VTI1A-206ENST00000489142 PRLHP81277 87 aa8.3□□□□□ -1.08
VTI1A-206ENST00000489142 SERF1AO75920 110 aa8.29□□□□□ -1.08
VTI1A-206ENST00000489142 RPL24P83731 157 aaKnown RBP8.29□□□□□ -1.08
VTI1A-206ENST00000489142 TSPAN13O95857 204 aa8.28□□□□□ -1.08
VTI1A-206ENST00000489142 SMIM13P0DJ93 91 aa8.28□□□□□ -1.08
VTI1A-206ENST00000489142 SFTA2Q6UW10 78 aa8.28□□□□□ -1.08
VTI1A-206ENST00000489142 FAM19A1Q7Z5A9 133 aa8.28□□□□□ -1.08
VTI1A-206ENST00000489142 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
VTI1A-206ENST00000489142 M0R378 163 aa8.27□□□□□ -1.09
VTI1A-206ENST00000489142 CRYGAP11844 174 aa8.26□□□□□ -1.09
VTI1A-206ENST00000489142 PRR4Q16378 134 aa8.26□□□□□ -1.09
VTI1A-206ENST00000489142 MEIG1Q5JSS6 88 aa8.26□□□□□ -1.09
VTI1A-206ENST00000489142 TYMSOSQ8TAI1 123 aa8.26□□□□□ -1.09
VTI1A-206ENST00000489142 NCR3O14931 201 aa8.25□□□□□ -1.09
VTI1A-206ENST00000489142 LEPROTL1O95214 131 aa8.25□□□□□ -1.09
VTI1A-206ENST00000489142 FABP4P15090 132 aa8.25□□□□□ -1.09
VTI1A-206ENST00000489142 TSPEAR-AS2P59090 65 aa8.25□□□□□ -1.09
VTI1A-206ENST00000489142 KRTAP13-2Q52LG2 175 aa8.25□□□□□ -1.09
VTI1A-206ENST00000489142 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
VTI1A-206ENST00000489142 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
VTI1A-206ENST00000489142 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
VTI1A-206ENST00000489142 MIR7-3HGQ8N6C7 128 aa8.24□□□□□ -1.09
VTI1A-206ENST00000489142 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
VTI1A-206ENST00000489142 COLCA2A8K830 154 aa8.23□□□□□ -1.09
VTI1A-206ENST00000489142 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
VTI1A-206ENST00000489142 DAND5Q8N907 189 aa8.22□□□□□ -1.09
VTI1A-206ENST00000489142 HERV-K104P63124 156 aa8.21□□□□□ -1.1
VTI1A-206ENST00000489142 HIGD2AQ9BW72 106 aa8.21□□□□□ -1.1
VTI1A-206ENST00000489142 MYMXA0A1B0GTQ4 84 aa8.2□□□□□ -1.1
VTI1A-206ENST00000489142 LEPROTO15243 131 aa8.2□□□□□ -1.1
VTI1A-206ENST00000489142 PLNP26678 52 aa8.2□□□□□ -1.1
VTI1A-206ENST00000489142 HSPB8Q9UJY1 196 aa8.2□□□□□ -1.1
VTI1A-206ENST00000489142 FAM229BQ4G0N7 80 aa8.19□□□□□ -1.1
VTI1A-206ENST00000489142 DPM2O94777 84 aa8.18□□□□□ -1.1
VTI1A-206ENST00000489142 PLEKHB2Q96CS7 222 aa8.18□□□□□ -1.1
VTI1A-206ENST00000489142 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
VTI1A-206ENST00000489142 J3QQQ9 107 aa8.17□□□□□ -1.1
VTI1A-206ENST00000489142 IGKCP01834 107 aa8.17□□□□□ -1.1
VTI1A-206ENST00000489142 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
VTI1A-206ENST00000489142 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
VTI1A-206ENST00000489142 TRBV10-3A0A0K0K1G6 114 aa8.16□□□□□ -1.1
VTI1A-206ENST00000489142 PRYO14603 147 aa8.16□□□□□ -1.1
VTI1A-206ENST00000489142 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
VTI1A-206ENST00000489142 MAP1LC3CQ9BXW4 147 aa8.16□□□□□ -1.1
VTI1A-206ENST00000489142 LINC00587B1AMM8 73 aa8.15□□□□□ -1.1
VTI1A-206ENST00000489142 LGALS3P17931 250 aaKnown RBP8.15□□□□□ -1.1
VTI1A-206ENST00000489142 HERVK_113P61574 105 aa8.15□□□□□ -1.1
VTI1A-206ENST00000489142 SPRR4Q96PI1 79 aa8.14□□□□□ -1.11
VTI1A-206ENST00000489142 KCNQ1DNQ9H478 68 aa8.14□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BKO60814 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BJP06899 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BOP23527 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BBP33778 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BDP58876 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 NPC2P61916 151 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BCP62807 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST2H2BEQ16778 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BHQ93079 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BNQ99877 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 HIST1H2BMQ99879 126 aa8.13□□□□□ -1.11
VTI1A-206ENST00000489142 ETDCA0A1B0GVM5 59 aa8.12□□□□□ -1.11
VTI1A-206ENST00000489142 SPRR1AP35321 89 aa8.12□□□□□ -1.11
VTI1A-206ENST00000489142 PPDPFQ9H3Y8 114 aa8.12□□□□□ -1.11
VTI1A-206ENST00000489142 KRTAP4-16G5E9R7 235 aaPredicted RBP8.11□□□□□ -1.11
VTI1A-206ENST00000489142 NMUP48645 174 aa8.11□□□□□ -1.11
VTI1A-206ENST00000489142 LINC00337Q8N6G1 96 aa8.11□□□□□ -1.11
VTI1A-206ENST00000489142 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
VTI1A-206ENST00000489142 SYS1-DBNDD2H3BUS1 97 aa8.1□□□□□ -1.11
VTI1A-206ENST00000489142 EIF4EBP3O60516 100 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-206ENST00000489142 DDTP30046 118 aa8.1□□□□□ -1.11
VTI1A-206ENST00000489142 LOC107984156A0A0G2JMH3 177 aa8.09□□□□□ -1.11
VTI1A-206ENST00000489142 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
VTI1A-206ENST00000489142 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
VTI1A-206ENST00000489142 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
VTI1A-206ENST00000489142 ARL17AQ8IVW1 177 aa8.09□□□□□ -1.11
VTI1A-206ENST00000489142 MIEN1Q9BRT3 115 aa8.09□□□□□ -1.11
VTI1A-206ENST00000489142 B5MCH6 92 aa8.08□□□□□ -1.12
VTI1A-206ENST00000489142 E9PLD3 99 aa8.08□□□□□ -1.12
VTI1A-206ENST00000489142 SPANXB1Q9NS25 103 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-206ENST00000489142 ZNF706Q9Y5V0 76 aaPredicted RBP8.08□□□□□ -1.12
VTI1A-206ENST00000489142 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
VTI1A-206ENST00000489142 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
VTI1A-206ENST00000489142 S100A12P80511 92 aa8.06□□□□□ -1.12
VTI1A-206ENST00000489142 S100A7L2Q5SY68 101 aa8.06□□□□□ -1.12
VTI1A-206ENST00000489142 LINC01545Q5VT33 79 aa8.05□□□□□ -1.12
VTI1A-206ENST00000489142 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
VTI1A-206ENST00000489142 Q8NBF4 154 aa8.05□□□□□ -1.12
VTI1A-206ENST00000489142 Q9BRP9 147 aa8.05□□□□□ -1.12
VTI1A-206ENST00000489142 IGLV6-57P01721 117 aa8.04□□□□□ -1.12
VTI1A-206ENST00000489142 TTTY13Q9BZ97 58 aa8.04□□□□□ -1.12
VTI1A-206ENST00000489142 TRAV23DV6A0A075B6W5 121 aa8.03□□□□□ -1.12
VTI1A-206ENST00000489142 NDUFC2O95298 119 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms