RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 TRAPPC1Q9Y5R8 145 aa15.04■□□□□ -0
RNF220-216ENST00000488865 BAGE3Q86Y29 109 aa15.03■□□□□ -0
RNF220-216ENST00000488865 PLEKHB2Q96CS7 222 aa15.03■□□□□ -0
RNF220-216ENST00000488865 PMCHL1Q16048 86 aa15.02■□□□□ -0
RNF220-216ENST00000488865 TMEM170BQ5T4T1 132 aa15.02■□□□□ -0
RNF220-216ENST00000488865 TPRXLQ17RH7 258 aa15.01□□□□□ -0.01
RNF220-216ENST00000488865 CBLN2Q8IUK8 224 aa15.01□□□□□ -0.01
RNF220-216ENST00000488865 IGLV7-46A0A075B6I9 117 aa14.97□□□□□ -0.01
RNF220-216ENST00000488865 CDIP1Q9H305 208 aa14.97□□□□□ -0.01
RNF220-216ENST00000488865 LINC00158P58513 81 aa14.96□□□□□ -0.01
RNF220-216ENST00000488865 HIGD2AQ9BW72 106 aa14.96□□□□□ -0.01
RNF220-216ENST00000488865 C3orf22Q8N5N4 141 aa14.95□□□□□ -0.02
RNF220-216ENST00000488865 CHTOPQ9Y3Y2 248 aaKnown RBP14.95□□□□□ -0.02
RNF220-216ENST00000488865 SPAG11AQ6PDA7 123 aa14.93□□□□□ -0.02
RNF220-216ENST00000488865 SPRR4Q96PI1 79 aa14.92□□□□□ -0.02
RNF220-216ENST00000488865 FAT4Q6V0I7 4981 aa14.91□□□□□ -0.02
RNF220-216ENST00000488865 TMEM223A0PJW6 202 aa14.91□□□□□ -0.02
RNF220-216ENST00000488865 LCE2AQ5TA79 106 aaPredicted RBP14.91□□□□□ -0.02
RNF220-216ENST00000488865 MUC17Q685J3 4493 aa14.9□□□□□ -0.02
RNF220-216ENST00000488865 TRAV12-1A0A0B4J245 112 aa14.89□□□□□ -0.03
RNF220-216ENST00000488865 A0A0U1RRA0 63 aa14.89□□□□□ -0.03
RNF220-216ENST00000488865 ZNF706Q9Y5V0 76 aaPredicted RBP14.89□□□□□ -0.03
RNF220-216ENST00000488865 PRYO14603 147 aa14.87□□□□□ -0.03
RNF220-216ENST00000488865 PPDPFQ9H3Y8 114 aa14.87□□□□□ -0.03
RNF220-216ENST00000488865 ATP6V1G1O75348 118 aa14.86□□□□□ -0.03
RNF220-216ENST00000488865 CHCHD1Q96BP2 118 aaKnown RBP14.86□□□□□ -0.03
RNF220-216ENST00000488865 SMIM13P0DJ93 91 aa14.85□□□□□ -0.03
RNF220-216ENST00000488865 IFI27L1Q96BM0 104 aa14.85□□□□□ -0.03
RNF220-216ENST00000488865 BOD1L2Q8IYS8 172 aa14.84□□□□□ -0.03
RNF220-216ENST00000488865 LINC00337Q8N6G1 96 aa14.84□□□□□ -0.03
RNF220-216ENST00000488865 SPRR1AP35321 89 aa14.83□□□□□ -0.04
RNF220-216ENST00000488865 C4orf48Q5BLP8 95 aa14.83□□□□□ -0.04
RNF220-216ENST00000488865 FP248Q71RG6 208 aaPredicted RBP14.83□□□□□ -0.04
RNF220-216ENST00000488865 KRTAP9-2Q9BYQ4 174 aa14.83□□□□□ -0.04
RNF220-216ENST00000488865 KCNQ1DNQ9H478 68 aa14.83□□□□□ -0.04
RNF220-216ENST00000488865 APOC3P02656 99 aa14.82□□□□□ -0.04
RNF220-216ENST00000488865 HERV-K104P63124 156 aa14.82□□□□□ -0.04
RNF220-216ENST00000488865 MEIG1Q5JSS6 88 aa14.82□□□□□ -0.04
RNF220-216ENST00000488865 SNAPINO95295 136 aa14.81□□□□□ -0.04
RNF220-216ENST00000488865 MIR7-3HGQ8N6C7 128 aa14.81□□□□□ -0.04
RNF220-216ENST00000488865 LINC00587B1AMM8 73 aa14.8□□□□□ -0.04
RNF220-216ENST00000488865 KRTAP4-16G5E9R7 235 aaPredicted RBP14.79□□□□□ -0.04
RNF220-216ENST00000488865 NCR3O14931 201 aa14.79□□□□□ -0.04
RNF220-216ENST00000488865 SVBPQ8N300 66 aa14.79□□□□□ -0.04
RNF220-216ENST00000488865 NDUFA5Q16718 116 aa14.78□□□□□ -0.04
RNF220-216ENST00000488865 SMCR5Q8TEV8 140 aa14.78□□□□□ -0.04
RNF220-216ENST00000488865 Q8NBF4 154 aa14.77□□□□□ -0.05
RNF220-216ENST00000488865 ETDCA0A1B0GVM5 59 aa14.76□□□□□ -0.05
RNF220-216ENST00000488865 NDUFA12Q9UI09 145 aa14.76□□□□□ -0.05
RNF220-216ENST00000488865 DAND5Q8N907 189 aa14.75□□□□□ -0.05
RNF220-216ENST00000488865 YPEL4Q96NS1 127 aa14.75□□□□□ -0.05
RNF220-216ENST00000488865 MAP1LC3CQ9BXW4 147 aa14.75□□□□□ -0.05
RNF220-216ENST00000488865 TRBV10-3A0A0K0K1G6 114 aa14.74□□□□□ -0.05
RNF220-216ENST00000488865 MYMXA0A1B0GTQ4 84 aa14.74□□□□□ -0.05
RNF220-216ENST00000488865 SPINK1P00995 79 aa14.73□□□□□ -0.05
RNF220-216ENST00000488865 LINC00483Q53H64 154 aa14.73□□□□□ -0.05
RNF220-216ENST00000488865 S100A12P80511 92 aa14.72□□□□□ -0.05
RNF220-216ENST00000488865 HSBP1O75506 76 aa14.71□□□□□ -0.05
RNF220-216ENST00000488865 KRTAP13-3Q3SY46 172 aa14.7□□□□□ -0.06
RNF220-216ENST00000488865 LOC107984156A0A0G2JMH3 177 aa14.69□□□□□ -0.06
RNF220-216ENST00000488865 ARL17AQ8IVW1 177 aa14.69□□□□□ -0.06
RNF220-216ENST00000488865 FAM19A2Q8N3H0 131 aa14.69□□□□□ -0.06
RNF220-216ENST00000488865 B5MCH6 92 aa14.67□□□□□ -0.06
RNF220-216ENST00000488865 GAGE2AQ6NT46 116 aa14.66□□□□□ -0.06
RNF220-216ENST00000488865 TRBV10-2A0A0K0K1G8 114 aa14.65□□□□□ -0.06
RNF220-216ENST00000488865 LEPROTO15243 131 aa14.65□□□□□ -0.06
RNF220-216ENST00000488865 H0Y8G0 127 aa14.64□□□□□ -0.07
RNF220-216ENST00000488865 TSPEAR-AS2P59090 65 aa14.64□□□□□ -0.07
RNF220-216ENST00000488865 DDTP30046 118 aa14.63□□□□□ -0.07
RNF220-216ENST00000488865 RPS29P62273 56 aaKnown RBP14.63□□□□□ -0.07
RNF220-216ENST00000488865 ASB16-AS1Q495Z4 193 aa14.63□□□□□ -0.07
RNF220-216ENST00000488865 SSBP3-AS1Q7Z2R9 100 aa14.63□□□□□ -0.07
RNF220-216ENST00000488865 ERC2-IT1O76042 136 aa14.62□□□□□ -0.07
RNF220-216ENST00000488865 LEPROTL1O95214 131 aa14.61□□□□□ -0.07
RNF220-216ENST00000488865 PLNP26678 52 aa14.61□□□□□ -0.07
RNF220-216ENST00000488865 MOBPQ13875 183 aa14.61□□□□□ -0.07
RNF220-216ENST00000488865 IGLV9-49A0A0B4J1Y8 123 aa14.59□□□□□ -0.07
RNF220-216ENST00000488865 Q6ZRX8 168 aa14.59□□□□□ -0.07
RNF220-216ENST00000488865 Q9BRP9 147 aa14.59□□□□□ -0.07
RNF220-216ENST00000488865 SPANXB1Q9NS25 103 aaPredicted RBP14.59□□□□□ -0.07
RNF220-216ENST00000488865 J3QQQ9 107 aa14.58□□□□□ -0.08
RNF220-216ENST00000488865 NMUP48645 174 aa14.57□□□□□ -0.08
RNF220-216ENST00000488865 MIEN1Q9BRT3 115 aa14.57□□□□□ -0.08
RNF220-216ENST00000488865 NDUFC2O95298 119 aa14.56□□□□□ -0.08
RNF220-216ENST00000488865 HERVK_113P61574 105 aa14.56□□□□□ -0.08
RNF220-216ENST00000488865 Q8N377 158 aa14.56□□□□□ -0.08
RNF220-216ENST00000488865 TRGC2P03986 189 aa14.55□□□□□ -0.08
RNF220-216ENST00000488865 SERF1AO75920 110 aa14.54□□□□□ -0.08
RNF220-216ENST00000488865 DPM2O94777 84 aa14.54□□□□□ -0.08
RNF220-216ENST00000488865 IGLV6-57P01721 117 aa14.54□□□□□ -0.08
RNF220-216ENST00000488865 LINC00310P59036 64 aa14.54□□□□□ -0.08
RNF220-216ENST00000488865 SEC61BP60468 96 aaKnown RBP14.54□□□□□ -0.08
RNF220-216ENST00000488865 S100A7L2Q5SY68 101 aa14.54□□□□□ -0.08
RNF220-216ENST00000488865 HSPB8Q9UJY1 196 aa14.54□□□□□ -0.08
RNF220-216ENST00000488865 SLC25A20O43772 301 aa14.52□□□□□ -0.09
RNF220-216ENST00000488865 LGALS3P17931 250 aaKnown RBP14.52□□□□□ -0.09
RNF220-216ENST00000488865 JOSD1Q15040 202 aaPredicted RBP14.52□□□□□ -0.09
RNF220-216ENST00000488865 TRAV23DV6A0A075B6W5 121 aa14.49□□□□□ -0.09
RNF220-216ENST00000488865 IGKCP01834 107 aa14.49□□□□□ -0.09
RNF220-216ENST00000488865 PMCHL2Q9BQD1 86 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms