RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 ACYP1P07311 99 aa13.51□□□□□ -0.25
NECAB3-213ENST00000488489 PFN2P35080 140 aa13.51□□□□□ -0.25
NECAB3-213ENST00000488489 LINC00158P58513 81 aa13.51□□□□□ -0.25
NECAB3-213ENST00000488489 CFAP161Q6P656 301 aa13.51□□□□□ -0.25
NECAB3-213ENST00000488489 C6orf223Q8N319 242 aa13.51□□□□□ -0.25
NECAB3-213ENST00000488489 TRAV13-2A0A0B4J235 113 aa13.49□□□□□ -0.25
NECAB3-213ENST00000488489 UPK3BQ9BT76 320 aa13.49□□□□□ -0.25
NECAB3-213ENST00000488489 APLNQ9ULZ1 77 aa13.49□□□□□ -0.25
NECAB3-213ENST00000488489 TRBV7-7A0A0K0K1E9 115 aa13.49□□□□□ -0.25
NECAB3-213ENST00000488489 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
NECAB3-213ENST00000488489 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
NECAB3-213ENST00000488489 FAM218AQ96MZ4 157 aa13.48□□□□□ -0.25
NECAB3-213ENST00000488489 C1orf43Q9BWL3 253 aa13.48□□□□□ -0.25
NECAB3-213ENST00000488489 Q9HAA7 133 aa13.48□□□□□ -0.25
NECAB3-213ENST00000488489 FBN3Q75N90 2809 aa13.47□□□□□ -0.25
NECAB3-213ENST00000488489 STARD9Q9P2P6 4700 aa13.47□□□□□ -0.25
NECAB3-213ENST00000488489 IGKV2D-24A0A075B6R9 120 aa13.47□□□□□ -0.25
NECAB3-213ENST00000488489 CXCL5P42830 114 aa13.47□□□□□ -0.25
NECAB3-213ENST00000488489 C10orf25Q5T742 122 aa13.47□□□□□ -0.25
NECAB3-213ENST00000488489 BAALC-AS2P0C853 105 aa13.46□□□□□ -0.26
NECAB3-213ENST00000488489 C9orf116Q5BN46 136 aaPredicted RBP13.46□□□□□ -0.26
NECAB3-213ENST00000488489 UNQ6190/PRO20217Q6UXQ8 127 aa13.46□□□□□ -0.26
NECAB3-213ENST00000488489 LINC00337Q8N6G1 96 aa13.45□□□□□ -0.26
NECAB3-213ENST00000488489 C22orf24Q9Y442 160 aa13.45□□□□□ -0.26
NECAB3-213ENST00000488489 IGKV2-28A0A075B6P5 120 aa13.44□□□□□ -0.26
NECAB3-213ENST00000488489 B5MCH6 92 aa13.44□□□□□ -0.26
NECAB3-213ENST00000488489 IGKV2D-28P01615 120 aa13.44□□□□□ -0.26
NECAB3-213ENST00000488489 SND1-IT1Q9HBX3 110 aa13.44□□□□□ -0.26
NECAB3-213ENST00000488489 CCDC179H3BU77 68 aa13.43□□□□□ -0.26
NECAB3-213ENST00000488489 C15orf56Q8N910 161 aa13.43□□□□□ -0.26
NECAB3-213ENST00000488489 HIGD2BQ4VC39 106 aa13.42□□□□□ -0.26
NECAB3-213ENST00000488489 IMUPQ9GZP8 106 aa13.41□□□□□ -0.26
NECAB3-213ENST00000488489 SS18L2Q9UHA2 77 aa13.41□□□□□ -0.26
NECAB3-213ENST00000488489 COX17Q14061 63 aa13.4□□□□□ -0.26
NECAB3-213ENST00000488489 SMCR5Q8TEV8 140 aa13.4□□□□□ -0.26
NECAB3-213ENST00000488489 INAFM2P0DMQ5 153 aa13.39□□□□□ -0.27
NECAB3-213ENST00000488489 SDIM1Q6ZPB5 146 aa13.39□□□□□ -0.27
NECAB3-213ENST00000488489 DNAH10Q8IVF4 4471 aa13.39□□□□□ -0.27
NECAB3-213ENST00000488489 NUPR2A6NF83 97 aa13.39□□□□□ -0.27
NECAB3-213ENST00000488489 LINC00643Q86TS7 51 aa13.39□□□□□ -0.27
NECAB3-213ENST00000488489 ZNF561-AS1K7EIQ3 104 aa13.38□□□□□ -0.27
NECAB3-213ENST00000488489 SMIM11BQ8TCY0 68 aa13.38□□□□□ -0.27
NECAB3-213ENST00000488489 KRTAP1-5Q9BYS1 174 aa13.38□□□□□ -0.27
NECAB3-213ENST00000488489 CASC10Q5T4H9 136 aa13.37□□□□□ -0.27
NECAB3-213ENST00000488489 TGP01266 2768 aa13.37□□□□□ -0.27
NECAB3-213ENST00000488489 C6orf48Q9UBA6 75 aa13.37□□□□□ -0.27
NECAB3-213ENST00000488489 UBE2DNLQ8IWF7 75 aa13.36□□□□□ -0.27
NECAB3-213ENST00000488489 GVQW2A0A096LPI5 108 aaPredicted RBP13.35□□□□□ -0.27
NECAB3-213ENST00000488489 A0A087WYN8 130 aa13.34□□□□□ -0.27
NECAB3-213ENST00000488489 H0YGX0 51 aa13.34□□□□□ -0.27
NECAB3-213ENST00000488489 DNAL4O96015 105 aa13.34□□□□□ -0.27
NECAB3-213ENST00000488489 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
NECAB3-213ENST00000488489 FAM236AA0A1B0GUQ0 79 aa13.32□□□□□ -0.28
NECAB3-213ENST00000488489 FAM236BA0A1B0GV22 79 aa13.32□□□□□ -0.28
NECAB3-213ENST00000488489 Q6ZRU5 148 aa13.32□□□□□ -0.28
NECAB3-213ENST00000488489 VPS13DQ5THJ4 4388 aa13.32□□□□□ -0.28
NECAB3-213ENST00000488489 C2orf48Q96LS8 159 aa13.31□□□□□ -0.28
NECAB3-213ENST00000488489 GAGE2AQ6NT46 116 aa13.3□□□□□ -0.28
NECAB3-213ENST00000488489 Q8NDZ9 215 aa13.3□□□□□ -0.28
NECAB3-213ENST00000488489 RMI2Q96E14 147 aa13.3□□□□□ -0.28
NECAB3-213ENST00000488489 PRR3P79522 188 aaKnown RBP13.29□□□□□ -0.28
NECAB3-213ENST00000488489 USP17L23D6RBM5 183 aa13.28□□□□□ -0.28
NECAB3-213ENST00000488489 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.29
NECAB3-213ENST00000488489 LECT2O14960 151 aa13.26□□□□□ -0.29
NECAB3-213ENST00000488489 SLPIP03973 132 aa13.26□□□□□ -0.29
NECAB3-213ENST00000488489 OR13C6PQ8NH95 151 aa13.25□□□□□ -0.29
NECAB3-213ENST00000488489 MUC7Q8TAX7 377 aa13.25□□□□□ -0.29
NECAB3-213ENST00000488489 C9orf129Q5T035 196 aaKnown RBP13.25□□□□□ -0.29
NECAB3-213ENST00000488489 NDUFC2O95298 119 aa13.24□□□□□ -0.29
NECAB3-213ENST00000488489 SYCNQ0VAF6 134 aa13.24□□□□□ -0.29
NECAB3-213ENST00000488489 XAGE1AQ9HD64 81 aa13.24□□□□□ -0.29
NECAB3-213ENST00000488489 C14orf132Q9NPU4 83 aa13.23□□□□□ -0.29
NECAB3-213ENST00000488489 F8WDY8 70 aa13.22□□□□□ -0.29
NECAB3-213ENST00000488489 KMT2AQ03164 3969 aa13.21□□□□□ -0.3
NECAB3-213ENST00000488489 NDUFC2-KCTD14E9PQ53 114 aa13.2□□□□□ -0.3
NECAB3-213ENST00000488489 NBDYA0A0U1RRE5 68 aa13.19□□□□□ -0.3
NECAB3-213ENST00000488489 Q6ZRP5 223 aa13.19□□□□□ -0.3
NECAB3-213ENST00000488489 ORMDL1Q9P0S3 153 aa13.19□□□□□ -0.3
NECAB3-213ENST00000488489 NCR3O14931 201 aa13.18□□□□□ -0.3
NECAB3-213ENST00000488489 SVIPQ8NHG7 77 aa13.18□□□□□ -0.3
NECAB3-213ENST00000488489 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
NECAB3-213ENST00000488489 A0A1B0GX51 115 aa13.16□□□□□ -0.3
NECAB3-213ENST00000488489 HIST1H4AP62805 103 aaKnown RBP13.16□□□□□ -0.3
NECAB3-213ENST00000488489 C3orf22Q8N5N4 141 aa13.16□□□□□ -0.3
NECAB3-213ENST00000488489 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
NECAB3-213ENST00000488489 PSCAO43653 123 aa13.15□□□□□ -0.3
NECAB3-213ENST00000488489 Q6JHZ5 121 aa13.15□□□□□ -0.3
NECAB3-213ENST00000488489 LINC00846Q9NV44 126 aa13.15□□□□□ -0.3
NECAB3-213ENST00000488489 UQCRQO14949 82 aa13.14□□□□□ -0.31
NECAB3-213ENST00000488489 RPL18AQ02543 176 aaKnown RBP13.13□□□□□ -0.31
NECAB3-213ENST00000488489 C9orf153Q5TBE3 101 aa13.12□□□□□ -0.31
NECAB3-213ENST00000488489 M0R2N4 97 aa13.11□□□□□ -0.31
NECAB3-213ENST00000488489 Q8N814 137 aa13.11□□□□□ -0.31
NECAB3-213ENST00000488489 TLX1NBP0CAT3 122 aa13.1□□□□□ -0.31
NECAB3-213ENST00000488489 VPREB1P12018 145 aa13.1□□□□□ -0.31
NECAB3-213ENST00000488489 ATOX1O00244 68 aa13.1□□□□□ -0.31
NECAB3-213ENST00000488489 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
NECAB3-213ENST00000488489 CCKP06307 115 aa13.09□□□□□ -0.31
NECAB3-213ENST00000488489 S100A7L2Q5SY68 101 aa13.09□□□□□ -0.31
NECAB3-213ENST00000488489 DNAH2Q9P225 4427 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms