RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 UBE2BP63146 152 aa9.86□□□□□ -0.83
C9orf3-219ENST00000488186 LBHQ53QV2 105 aaPredicted RBP9.86□□□□□ -0.83
C9orf3-219ENST00000488186 ZNF815PA8K554 130 aa9.85□□□□□ -0.83
C9orf3-219ENST00000488186 RPL24P83731 157 aaKnown RBP9.85□□□□□ -0.83
C9orf3-219ENST00000488186 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
C9orf3-219ENST00000488186 NKAPP1Q8N9T2 125 aa9.85□□□□□ -0.83
C9orf3-219ENST00000488186 C22orf24Q9Y442 160 aa9.85□□□□□ -0.83
C9orf3-219ENST00000488186 ABCA13Q86UQ4 5058 aa9.84□□□□□ -0.83
C9orf3-219ENST00000488186 IGKV2D-26A0A0A0MRZ7 120 aa9.84□□□□□ -0.83
C9orf3-219ENST00000488186 ANKRD39Q53RE8 183 aa9.84□□□□□ -0.83
C9orf3-219ENST00000488186 SERTAD4-AS1Q5TG53 156 aa9.84□□□□□ -0.83
C9orf3-219ENST00000488186 PLA2G2DQ9UNK4 145 aa9.84□□□□□ -0.83
C9orf3-219ENST00000488186 A0A0J9YXY3 114 aa9.83□□□□□ -0.84
C9orf3-219ENST00000488186 MIEN1Q9BRT3 115 aa9.82□□□□□ -0.84
C9orf3-219ENST00000488186 SCGB1D4Q6XE38 83 aa9.81□□□□□ -0.84
C9orf3-219ENST00000488186 MRPL55Q7Z7F7 128 aaKnown RBP9.81□□□□□ -0.84
C9orf3-219ENST00000488186 KRTAP7-1Q8IUC3 87 aa9.81□□□□□ -0.84
C9orf3-219ENST00000488186 TP73-AS1Q9UF72 201 aa9.81□□□□□ -0.84
C9orf3-219ENST00000488186 INAFM2P0DMQ5 153 aa9.8□□□□□ -0.84
C9orf3-219ENST00000488186 BOD1L2Q8IYS8 172 aa9.8□□□□□ -0.84
C9orf3-219ENST00000488186 DAND5Q8N907 189 aa9.8□□□□□ -0.84
C9orf3-219ENST00000488186 TTTY13Q9BZ97 58 aa9.8□□□□□ -0.84
C9orf3-219ENST00000488186 IGLV5-37A0A075B6J1 123 aa9.78□□□□□ -0.84
C9orf3-219ENST00000488186 GAGE10A6NGK3 116 aa9.78□□□□□ -0.84
C9orf3-219ENST00000488186 KRTAP10-4P60372 401 aaPredicted RBP9.78□□□□□ -0.84
C9orf3-219ENST00000488186 PRR3P79522 188 aaKnown RBP9.78□□□□□ -0.84
C9orf3-219ENST00000488186 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
C9orf3-219ENST00000488186 TIMM17BO60830 172 aa9.77□□□□□ -0.85
C9orf3-219ENST00000488186 VPREB1P12018 145 aa9.77□□□□□ -0.85
C9orf3-219ENST00000488186 C1orf137Q5JT78 98 aa9.77□□□□□ -0.85
C9orf3-219ENST00000488186 PCP2Q8IVA1 136 aa9.77□□□□□ -0.85
C9orf3-219ENST00000488186 LINC00167Q96N53 147 aa9.77□□□□□ -0.85
C9orf3-219ENST00000488186 RPL37AP8A6NKH3 93 aa9.76□□□□□ -0.85
C9orf3-219ENST00000488186 NPC2P61916 151 aa9.76□□□□□ -0.85
C9orf3-219ENST00000488186 JOSD1Q15040 202 aaPredicted RBP9.76□□□□□ -0.85
C9orf3-219ENST00000488186 TMEM238C9JI98 176 aa9.75□□□□□ -0.85
C9orf3-219ENST00000488186 ADAMTSL4-AS1Q5T5F5 129 aa9.75□□□□□ -0.85
C9orf3-219ENST00000488186 M0R378 163 aa9.74□□□□□ -0.85
C9orf3-219ENST00000488186 FLG2Q5D862 2391 aaPredicted RBP9.74□□□□□ -0.85
C9orf3-219ENST00000488186 NCR3O14931 201 aa9.73□□□□□ -0.85
C9orf3-219ENST00000488186 COPS9Q8WXC6 57 aa9.73□□□□□ -0.85
C9orf3-219ENST00000488186 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
C9orf3-219ENST00000488186 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
C9orf3-219ENST00000488186 LOC107984156A0A0G2JMH3 177 aa9.72□□□□□ -0.85
C9orf3-219ENST00000488186 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
C9orf3-219ENST00000488186 KRTAP11-1Q8IUC1 163 aa9.72□□□□□ -0.85
C9orf3-219ENST00000488186 ARL17AQ8IVW1 177 aa9.72□□□□□ -0.85
C9orf3-219ENST00000488186 PAM16Q9Y3D7 125 aa9.72□□□□□ -0.85
C9orf3-219ENST00000488186 Q8NDZ9 215 aa9.71□□□□□ -0.86
C9orf3-219ENST00000488186 LINC00308Q8TCZ7 52 aa9.71□□□□□ -0.86
C9orf3-219ENST00000488186 LITAFQ99732 161 aa9.71□□□□□ -0.86
C9orf3-219ENST00000488186 S100A12P80511 92 aa9.7□□□□□ -0.86
C9orf3-219ENST00000488186 SPATA45Q537H7 98 aa9.7□□□□□ -0.86
C9orf3-219ENST00000488186 IGLV1-50A0A075B6I6 118 aa9.69□□□□□ -0.86
C9orf3-219ENST00000488186 NDUFC2O95298 119 aa9.69□□□□□ -0.86
C9orf3-219ENST00000488186 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
C9orf3-219ENST00000488186 Q6ZVH6 145 aa9.69□□□□□ -0.86
C9orf3-219ENST00000488186 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
C9orf3-219ENST00000488186 SPANXB1Q9NS25 103 aaPredicted RBP9.69□□□□□ -0.86
C9orf3-219ENST00000488186 SPANXCQ9NY87 97 aa9.69□□□□□ -0.86
C9orf3-219ENST00000488186 IGLV7-43P04211 117 aa9.68□□□□□ -0.86
C9orf3-219ENST00000488186 COX8AP10176 69 aa9.68□□□□□ -0.86
C9orf3-219ENST00000488186 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
C9orf3-219ENST00000488186 SPINK6Q6UWN8 80 aa9.68□□□□□ -0.86
C9orf3-219ENST00000488186 SOSTDC1Q6X4U4 206 aa9.68□□□□□ -0.86
C9orf3-219ENST00000488186 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
C9orf3-219ENST00000488186 TRBV10-2A0A0K0K1G8 114 aa9.67□□□□□ -0.86
C9orf3-219ENST00000488186 BCE1O60756 84 aa9.67□□□□□ -0.86
C9orf3-219ENST00000488186 IFITM1P13164 125 aa9.67□□□□□ -0.86
C9orf3-219ENST00000488186 HNRNPA3P51991 378 aaKnown RBP9.67□□□□□ -0.86
C9orf3-219ENST00000488186 PYY3Q5JQD4 70 aa9.67□□□□□ -0.86
C9orf3-219ENST00000488186 REG3GQ6UW15 175 aa9.66□□□□□ -0.86
C9orf3-219ENST00000488186 C14orf144Q96I85 54 aa9.66□□□□□ -0.86
C9orf3-219ENST00000488186 EIF4EBP3O60516 100 aaPredicted RBP9.65□□□□□ -0.86
C9orf3-219ENST00000488186 DDTP30046 118 aa9.65□□□□□ -0.86
C9orf3-219ENST00000488186 UBE2AP49459 152 aa9.65□□□□□ -0.86
C9orf3-219ENST00000488186 PKHD1L1Q86WI1 4243 aa9.65□□□□□ -0.86
C9orf3-219ENST00000488186 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
C9orf3-219ENST00000488186 MUSTN1Q8IVN3 82 aa9.64□□□□□ -0.87
C9orf3-219ENST00000488186 LINC00518Q8N0U6 118 aa9.64□□□□□ -0.87
C9orf3-219ENST00000488186 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
C9orf3-219ENST00000488186 TMEM126AQ9H061 195 aa9.64□□□□□ -0.87
C9orf3-219ENST00000488186 TRBV10-3A0A0K0K1G6 114 aa9.63□□□□□ -0.87
C9orf3-219ENST00000488186 DLEU1O43261 78 aa9.63□□□□□ -0.87
C9orf3-219ENST00000488186 RPL28P46779 137 aaKnown RBP9.63□□□□□ -0.87
C9orf3-219ENST00000488186 SLC25A34Q6PIV7 304 aa9.63□□□□□ -0.87
C9orf3-219ENST00000488186 FAM19A1Q7Z5A9 133 aa9.63□□□□□ -0.87
C9orf3-219ENST00000488186 DIRC1Q969H9 104 aa9.63□□□□□ -0.87
C9orf3-219ENST00000488186 KRTAP29-1A8MX34 341 aaPredicted RBP9.62□□□□□ -0.87
C9orf3-219ENST00000488186 PRYO14603 147 aa9.62□□□□□ -0.87
C9orf3-219ENST00000488186 ZNF861PO60384 105 aa9.62□□□□□ -0.87
C9orf3-219ENST00000488186 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
C9orf3-219ENST00000488186 CBY1Q9Y3M2 126 aa9.62□□□□□ -0.87
C9orf3-219ENST00000488186 OXTP01178 125 aa9.61□□□□□ -0.87
C9orf3-219ENST00000488186 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
C9orf3-219ENST00000488186 KCNQ1DNQ9H478 68 aa9.6□□□□□ -0.87
C9orf3-219ENST00000488186 ETDCA0A1B0GVM5 59 aa9.59□□□□□ -0.87
C9orf3-219ENST00000488186 IGLV6-57P01721 117 aa9.58□□□□□ -0.88
C9orf3-219ENST00000488186 TRAV23DV6A0A075B6W5 121 aa9.57□□□□□ -0.88
C9orf3-219ENST00000488186 A6NDN8 102 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms