RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 H3BNG1 76 aa8.11□□□□□ -1.11
TRA2B-214ENST00000487615 KRTAP24-1Q3LI83 254 aa8.11□□□□□ -1.11
TRA2B-214ENST00000487615 Q6JHZ5 121 aa8.11□□□□□ -1.11
TRA2B-214ENST00000487615 FAM218AQ96MZ4 157 aa8.11□□□□□ -1.11
TRA2B-214ENST00000487615 CHD6Q8TD26 2715 aa8.1□□□□□ -1.11
TRA2B-214ENST00000487615 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
TRA2B-214ENST00000487615 BPY2O14599 106 aa8.1□□□□□ -1.11
TRA2B-214ENST00000487615 LINC00612Q8N6U2 182 aa8.1□□□□□ -1.11
TRA2B-214ENST00000487615 CFAP47Q6ZTR5 3102 aa8.1□□□□□ -1.11
TRA2B-214ENST00000487615 Q6ZRU5 148 aa8.1□□□□□ -1.11
TRA2B-214ENST00000487615 DHRS4-AS1Q9P1J3 65 aa8.1□□□□□ -1.11
TRA2B-214ENST00000487615 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
TRA2B-214ENST00000487615 F8WDY8 70 aa8.09□□□□□ -1.11
TRA2B-214ENST00000487615 UNC79Q9P2D8 2635 aa8.09□□□□□ -1.11
TRA2B-214ENST00000487615 RPL37AP8A6NKH3 93 aa8.09□□□□□ -1.11
TRA2B-214ENST00000487615 USP17L23D6RBM5 183 aa8.09□□□□□ -1.11
TRA2B-214ENST00000487615 ESRGQ1W209 222 aa8.09□□□□□ -1.11
TRA2B-214ENST00000487615 LINC00575Q6W349 94 aa8.09□□□□□ -1.11
TRA2B-214ENST00000487615 MUC3AQ02505 3323 aa8.08□□□□□ -1.12
TRA2B-214ENST00000487615 C10orf25Q5T742 122 aa8.08□□□□□ -1.12
TRA2B-214ENST00000487615 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
TRA2B-214ENST00000487615 LINC01556Q5JQF7 62 aa8.08□□□□□ -1.12
TRA2B-214ENST00000487615 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
TRA2B-214ENST00000487615 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
TRA2B-214ENST00000487615 C6orf48Q9UBA6 75 aa8.06□□□□□ -1.12
TRA2B-214ENST00000487615 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
TRA2B-214ENST00000487615 MAST4O15021 2626 aa8.05□□□□□ -1.12
TRA2B-214ENST00000487615 B9D2Q9BPU9 175 aa8.05□□□□□ -1.12
TRA2B-214ENST00000487615 C3orf84H3BNL1 204 aa8.04□□□□□ -1.12
TRA2B-214ENST00000487615 LINC00846Q9NV44 126 aa8.04□□□□□ -1.12
TRA2B-214ENST00000487615 SERP2Q8N6R1 65 aa8.04□□□□□ -1.12
TRA2B-214ENST00000487615 C20orf197Q8N268 126 aa8.04□□□□□ -1.12
TRA2B-214ENST00000487615 FAM104AQ969W3 186 aa8.04□□□□□ -1.12
TRA2B-214ENST00000487615 ITPR1Q14643 2758 aa8.03□□□□□ -1.12
TRA2B-214ENST00000487615 COX7CP15954 63 aa8.03□□□□□ -1.12
TRA2B-214ENST00000487615 HRNRQ86YZ3 2850 aaPredicted RBP8.02□□□□□ -1.12
TRA2B-214ENST00000487615 TRBV7-7A0A0K0K1E9 115 aa8.02□□□□□ -1.13
TRA2B-214ENST00000487615 A0A087WVE0 104 aa8.01□□□□□ -1.13
TRA2B-214ENST00000487615 WDFY3Q8IZQ1 3526 aa8.01□□□□□ -1.13
TRA2B-214ENST00000487615 MGAM2Q2M2H8 2515 aa8.01□□□□□ -1.13
TRA2B-214ENST00000487615 J3KT08 172 aa8□□□□□ -1.13
TRA2B-214ENST00000487615 NDUFB1O75438 58 aa8□□□□□ -1.13
TRA2B-214ENST00000487615 SETXQ7Z333 2677 aaKnown RBP8□□□□□ -1.13
TRA2B-214ENST00000487615 KIAA0087Q14695 138 aa8□□□□□ -1.13
TRA2B-214ENST00000487615 GCN1Q92616 2671 aaKnown RBP7.99□□□□□ -1.13
TRA2B-214ENST00000487615 UTP20O75691 2785 aaKnown RBP7.99□□□□□ -1.13
TRA2B-214ENST00000487615 GVQW2A0A096LPI5 108 aaPredicted RBP7.99□□□□□ -1.13
TRA2B-214ENST00000487615 PRR34Q9NV39 138 aa7.99□□□□□ -1.13
TRA2B-214ENST00000487615 A0A096LNI7 61 aa7.98□□□□□ -1.13
TRA2B-214ENST00000487615 M0R2N4 97 aa7.98□□□□□ -1.13
TRA2B-214ENST00000487615 NUPR2A6NF83 97 aa7.97□□□□□ -1.13
TRA2B-214ENST00000487615 PRYO14603 147 aa7.97□□□□□ -1.13
TRA2B-214ENST00000487615 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
TRA2B-214ENST00000487615 DMDP11532 3685 aa7.97□□□□□ -1.13
TRA2B-214ENST00000487615 KRTAP10-11P60412 298 aa7.96□□□□□ -1.13
TRA2B-214ENST00000487615 REG3GQ6UW15 175 aa7.96□□□□□ -1.13
TRA2B-214ENST00000487615 SPATA3Q8NHX4 192 aa7.96□□□□□ -1.13
TRA2B-214ENST00000487615 MP68P56378 58 aa7.96□□□□□ -1.14
TRA2B-214ENST00000487615 C1orf137Q5JT78 98 aa7.95□□□□□ -1.14
TRA2B-214ENST00000487615 C7orf33Q8WU49 177 aa7.95□□□□□ -1.14
TRA2B-214ENST00000487615 LINC00474Q9P2X8 69 aa7.95□□□□□ -1.14
TRA2B-214ENST00000487615 ZANQ9Y493 2812 aa7.95□□□□□ -1.14
TRA2B-214ENST00000487615 TEP1Q99973 2627 aaKnown RBP7.95□□□□□ -1.14
TRA2B-214ENST00000487615 Q6ZVQ6 151 aa7.94□□□□□ -1.14
TRA2B-214ENST00000487615 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
TRA2B-214ENST00000487615 ELOF1P60002 83 aaKnown RBP7.93□□□□□ -1.14
TRA2B-214ENST00000487615 NDUFS5O43920 106 aa7.93□□□□□ -1.14
TRA2B-214ENST00000487615 C22orf24Q9Y442 160 aa7.93□□□□□ -1.14
TRA2B-214ENST00000487615 LINC00588Q9Y4M8 146 aa7.93□□□□□ -1.14
TRA2B-214ENST00000487615 H0Y9J4 135 aa7.93□□□□□ -1.14
TRA2B-214ENST00000487615 IGLV6-57P01721 117 aa7.93□□□□□ -1.14
TRA2B-214ENST00000487615 DNAH10OSP0CZ25 163 aa7.93□□□□□ -1.14
TRA2B-214ENST00000487615 TMEM258P61165 79 aa7.92□□□□□ -1.14
TRA2B-214ENST00000487615 VPREB1P12018 145 aa7.91□□□□□ -1.14
TRA2B-214ENST00000487615 LINC01547P58512 204 aaPredicted RBP7.9□□□□□ -1.14
TRA2B-214ENST00000487615 FAM236DA0A1B0GTK5 79 aa7.9□□□□□ -1.14
TRA2B-214ENST00000487615 FAM236CP0DP71 79 aa7.9□□□□□ -1.14
TRA2B-214ENST00000487615 ITPR2Q14571 2701 aa7.9□□□□□ -1.15
TRA2B-214ENST00000487615 Q6ZRP5 223 aa7.9□□□□□ -1.15
TRA2B-214ENST00000487615 LINC00167Q96N53 147 aa7.9□□□□□ -1.15
TRA2B-214ENST00000487615 UBR5O95071 2799 aaPredicted RBP7.9□□□□□ -1.15
TRA2B-214ENST00000487615 TRAV7A0A075B6U4 112 aa7.89□□□□□ -1.15
TRA2B-214ENST00000487615 NBEAL2Q6ZNJ1 2754 aa7.89□□□□□ -1.15
TRA2B-214ENST00000487615 Q6ZQT0 140 aa7.88□□□□□ -1.15
TRA2B-214ENST00000487615 SNURFQ9Y675 71 aa7.88□□□□□ -1.15
TRA2B-214ENST00000487615 APCP25054 2843 aa7.87□□□□□ -1.15
TRA2B-214ENST00000487615 LOC110117498A0A087WWA1 95 aa7.87□□□□□ -1.15
TRA2B-214ENST00000487615 SMCR5Q8TEV8 140 aa7.87□□□□□ -1.15
TRA2B-214ENST00000487615 NHLRC4P0CG21 123 aaPredicted RBP7.87□□□□□ -1.15
TRA2B-214ENST00000487615 C15orf56Q8N910 161 aa7.87□□□□□ -1.15
TRA2B-214ENST00000487615 NDUFC1O43677 76 aa7.86□□□□□ -1.15
TRA2B-214ENST00000487615 CXCL6P80162 114 aa7.86□□□□□ -1.15
TRA2B-214ENST00000487615 PRLHP81277 87 aa7.86□□□□□ -1.15
TRA2B-214ENST00000487615 LINC01600Q96MT4 127 aa7.86□□□□□ -1.15
TRA2B-214ENST00000487615 WIPF1O43516 503 aa7.86□□□□□ -1.15
TRA2B-214ENST00000487615 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
TRA2B-214ENST00000487615 ASPMQ8IZT6 3477 aa7.85□□□□□ -1.15
TRA2B-214ENST00000487615 LAMA5O15230 3695 aa7.85□□□□□ -1.15
TRA2B-214ENST00000487615 K7EIL1 84 aa7.85□□□□□ -1.15
TRA2B-214ENST00000487615 LY6G6CO95867 125 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms