RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 SMCPP49901 116 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-216ENST00000486741 CSNK1G2-AS1Q8NCQ2 148 aa9.2□□□□□ -0.94
HMGN1-216ENST00000486741 LINC00337Q8N6G1 96 aa9.2□□□□□ -0.94
HMGN1-216ENST00000486741 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-216ENST00000486741 IGKV2-28A0A075B6P5 120 aa9.2□□□□□ -0.94
HMGN1-216ENST00000486741 IGKV2D-28P01615 120 aa9.2□□□□□ -0.94
HMGN1-216ENST00000486741 KRTAP24-1Q3LI83 254 aa9.2□□□□□ -0.94
HMGN1-216ENST00000486741 COX7CP15954 63 aa9.19□□□□□ -0.94
HMGN1-216ENST00000486741 F8WEM9 126 aa9.19□□□□□ -0.94
HMGN1-216ENST00000486741 NDUFC2O95298 119 aa9.19□□□□□ -0.94
HMGN1-216ENST00000486741 A0A1B0GUV1 79 aa9.19□□□□□ -0.94
HMGN1-216ENST00000486741 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
HMGN1-216ENST00000486741 SYCNQ0VAF6 134 aa9.18□□□□□ -0.94
HMGN1-216ENST00000486741 A0A087WYN8 130 aa9.18□□□□□ -0.94
HMGN1-216ENST00000486741 COX7BP24311 80 aa9.17□□□□□ -0.94
HMGN1-216ENST00000486741 PLAC8L1A1L4L8 177 aa9.17□□□□□ -0.94
HMGN1-216ENST00000486741 TMEM256-PLSCR3K7ERE1 68 aa9.17□□□□□ -0.94
HMGN1-216ENST00000486741 V9GYY9 64 aa9.17□□□□□ -0.94
HMGN1-216ENST00000486741 TRAV10A0A0B4J240 114 aa9.17□□□□□ -0.94
HMGN1-216ENST00000486741 Q6Q795 121 aa9.17□□□□□ -0.94
HMGN1-216ENST00000486741 IGLV5-45A0A087WSX0 123 aa9.16□□□□□ -0.94
HMGN1-216ENST00000486741 FAM236DA0A1B0GTK5 79 aa9.16□□□□□ -0.94
HMGN1-216ENST00000486741 FAM236CP0DP71 79 aa9.16□□□□□ -0.94
HMGN1-216ENST00000486741 Q6ZQY7 126 aa9.16□□□□□ -0.94
HMGN1-216ENST00000486741 USP17L23D6RBM5 183 aa9.15□□□□□ -0.94
HMGN1-216ENST00000486741 PRO0461Q9UI25 63 aa9.15□□□□□ -0.95
HMGN1-216ENST00000486741 LITAFQ99732 161 aa9.14□□□□□ -0.95
HMGN1-216ENST00000486741 JMJD7-PLA2G4BH0Y9G9 81 aa9.14□□□□□ -0.95
HMGN1-216ENST00000486741 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
HMGN1-216ENST00000486741 HIVEP1P15822 2718 aa9.14□□□□□ -0.95
HMGN1-216ENST00000486741 SBSPONQ8IVN8 264 aa9.14□□□□□ -0.95
HMGN1-216ENST00000486741 SPENQ96T58 3664 aaKnown RBP9.13□□□□□ -0.95
HMGN1-216ENST00000486741 RPL37AP8A6NKH3 93 aa9.13□□□□□ -0.95
HMGN1-216ENST00000486741 IMUPQ9GZP8 106 aa9.13□□□□□ -0.95
HMGN1-216ENST00000486741 A0A087WVE0 104 aa9.13□□□□□ -0.95
HMGN1-216ENST00000486741 Q8NAQ8 132 aa9.13□□□□□ -0.95
HMGN1-216ENST00000486741 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
HMGN1-216ENST00000486741 NIPBLQ6KC79 2804 aaeCLIP9.12□□□□□ -0.95
HMGN1-216ENST00000486741 CUBNO60494 3623 aa9.12□□□□□ -0.95
HMGN1-216ENST00000486741 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
HMGN1-216ENST00000486741 ENHOQ6UWT2 76 aa9.12□□□□□ -0.95
HMGN1-216ENST00000486741 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-216ENST00000486741 M0R2N4 97 aa9.11□□□□□ -0.95
HMGN1-216ENST00000486741 TRBV10-3A0A0K0K1G6 114 aa9.11□□□□□ -0.95
HMGN1-216ENST00000486741 SNURFQ9Y675 71 aa9.11□□□□□ -0.95
HMGN1-216ENST00000486741 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
HMGN1-216ENST00000486741 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
HMGN1-216ENST00000486741 ESRGQ1W209 222 aa9.1□□□□□ -0.95
HMGN1-216ENST00000486741 WFDC9Q8NEX5 89 aa9.1□□□□□ -0.95
HMGN1-216ENST00000486741 COX17Q14061 63 aa9.09□□□□□ -0.95
HMGN1-216ENST00000486741 IL17DQ8TAD2 202 aa9.09□□□□□ -0.95
HMGN1-216ENST00000486741 FAM218AQ96MZ4 157 aa9.09□□□□□ -0.95
HMGN1-216ENST00000486741 UPK3BQ9BT76 320 aa9.09□□□□□ -0.95
HMGN1-216ENST00000486741 A0A096LNI7 61 aa9.08□□□□□ -0.96
HMGN1-216ENST00000486741 BAHCC1Q9P281 2608 aa9.08□□□□□ -0.96
HMGN1-216ENST00000486741 C1orf195Q5TG92 126 aa9.07□□□□□ -0.96
HMGN1-216ENST00000486741 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-216ENST00000486741 Q6ZRU5 148 aa9.07□□□□□ -0.96
HMGN1-216ENST00000486741 NREPQ16612 68 aa9.05□□□□□ -0.96
HMGN1-216ENST00000486741 Q8N814 137 aa9.05□□□□□ -0.96
HMGN1-216ENST00000486741 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGN1-216ENST00000486741 KRTAP10-11P60412 298 aa9.04□□□□□ -0.96
HMGN1-216ENST00000486741 FAM104AQ969W3 186 aa9.04□□□□□ -0.96
HMGN1-216ENST00000486741 M0R378 163 aa9.04□□□□□ -0.96
HMGN1-216ENST00000486741 FAM240AA0A1B0GVK7 77 aa9.04□□□□□ -0.96
HMGN1-216ENST00000486741 SPTSSBQ8NFR3 76 aa9.04□□□□□ -0.96
HMGN1-216ENST00000486741 C4orf26Q17RF5 130 aa9.03□□□□□ -0.96
HMGN1-216ENST00000486741 EGFEM1PQ0D2K5 195 aa9.03□□□□□ -0.96
HMGN1-216ENST00000486741 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
HMGN1-216ENST00000486741 C3orf84H3BNL1 204 aa9.02□□□□□ -0.97
HMGN1-216ENST00000486741 UBE2AP49459 152 aa9.02□□□□□ -0.97
HMGN1-216ENST00000486741 FAM19A1Q7Z5A9 133 aa9.02□□□□□ -0.97
HMGN1-216ENST00000486741 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
HMGN1-216ENST00000486741 CCKP06307 115 aa9□□□□□ -0.97
HMGN1-216ENST00000486741 NHLRC4P0CG21 123 aaPredicted RBP9□□□□□ -0.97
HMGN1-216ENST00000486741 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
HMGN1-216ENST00000486741 LRCOL1A6NCL2 159 aa8.97□□□□□ -0.97
HMGN1-216ENST00000486741 BSNQ9UPA5 3926 aa8.96□□□□□ -0.97
HMGN1-216ENST00000486741 SMIM26A0A096LP01 95 aa8.96□□□□□ -0.97
HMGN1-216ENST00000486741 PRR4Q16378 134 aa8.95□□□□□ -0.98
HMGN1-216ENST00000486741 LINC00846Q9NV44 126 aa8.95□□□□□ -0.98
HMGN1-216ENST00000486741 LINC00612Q8N6U2 182 aa8.95□□□□□ -0.98
HMGN1-216ENST00000486741 TRBV7-7A0A0K0K1E9 115 aa8.94□□□□□ -0.98
HMGN1-216ENST00000486741 LINC01561Q8N1V8 128 aa8.94□□□□□ -0.98
HMGN1-216ENST00000486741 LINC00575Q6W349 94 aa8.94□□□□□ -0.98
HMGN1-216ENST00000486741 PDE6GP18545 87 aa8.94□□□□□ -0.98
HMGN1-216ENST00000486741 LINC01556Q5JQF7 62 aa8.93□□□□□ -0.98
HMGN1-216ENST00000486741 CSMD2Q7Z408 3487 aa8.93□□□□□ -0.98
HMGN1-216ENST00000486741 BPY2O14599 106 aa8.93□□□□□ -0.98
HMGN1-216ENST00000486741 CDK2AP2O75956 126 aa8.92□□□□□ -0.98
HMGN1-216ENST00000486741 Q6JHZ5 121 aa8.92□□□□□ -0.98
HMGN1-216ENST00000486741 KIAA0087Q14695 138 aa8.92□□□□□ -0.98
HMGN1-216ENST00000486741 FAM19A3Q7Z5A8 133 aa8.92□□□□□ -0.98
HMGN1-216ENST00000486741 H3BQ85 93 aa8.91□□□□□ -0.98
HMGN1-216ENST00000486741 C14orf177Q52M58 125 aa8.91□□□□□ -0.98
HMGN1-216ENST00000486741 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.91□□□□□ -0.98
HMGN1-216ENST00000486741 MUC7Q8TAX7 377 aa8.91□□□□□ -0.98
HMGN1-216ENST00000486741 LINC00588Q9Y4M8 146 aa8.91□□□□□ -0.98
HMGN1-216ENST00000486741 C2orf48Q96LS8 159 aa8.91□□□□□ -0.98
HMGN1-216ENST00000486741 PRO0628Q9UI54 55 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms