RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 C3orf84H3BNL1 204 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 NDUFS5O43920 106 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 PRM2P04554 102 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 SPINK8P0C7L1 97 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 POLR2KP53803 58 aaKnown RBP3.16□□□□□ -1.9
RTN4-214ENST00000486085 LYRM7Q5U5X0 104 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 HIST3H2BBQ8N257 126 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 SLC25A29Q8N8R3 303 aa3.16□□□□□ -1.9
RTN4-214ENST00000486085 TRBV7-3A0A075B6L6 115 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 DEFB131BA0A096LNP1 70 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 HTN1P15515 57 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 PSMB2P49721 201 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 UBE2D3P61077 147 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 UBE2D2P62837 147 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 MRPL51Q4U2R6 128 aaKnown RBP3.15□□□□□ -1.91
RTN4-214ENST00000486085 MRPL54Q6P161 138 aaKnown RBP3.15□□□□□ -1.91
RTN4-214ENST00000486085 PRR15Q8IV56 129 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 ORMDL3Q8N138 153 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 LYSTQ99698 3801 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 UPK3BQ9BT76 320 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 CHCHD7Q9BUK0 85 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 HHLA3Q9XRX5 114 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 MRPS16Q9Y3D3 137 aaKnown RBP3.15□□□□□ -1.91
RTN4-214ENST00000486085 ALMS1Q8TCU4 4167 aa3.15□□□□□ -1.91
RTN4-214ENST00000486085 APOMO95445 188 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 DEFB130BP0DP73 79 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 DEFB130AP0DP74 79 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 Q0VG73 95 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 AMN1Q8IY45 258 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 ST20-AS1Q8NBB2 130 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 MUC7Q8TAX7 377 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 VAMP8Q9BV40 100 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 IMUPQ9GZP8 106 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 NXT2Q9NPJ8 142 aaKnown RBP3.14□□□□□ -1.91
RTN4-214ENST00000486085 KLK5Q9Y337 293 aaPredicted RBP3.14□□□□□ -1.91
RTN4-214ENST00000486085 ICOSQ9Y6W8 199 aa3.14□□□□□ -1.91
RTN4-214ENST00000486085 A0A096LPF7 62 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 TRAV8-3A0A0A6YYJ7 113 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 TRGV4A0A0C4DH28 118 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 D6R8Y8 96 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 DEFB4AO15263 64 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 IFITM1P13164 125 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 CKS2P33552 79 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 ZNF56Q15929 161 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 PRELID3AQ96N28 172 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 TIMM21Q9BVV7 248 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 SMIM2Q9BVW6 85 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 APLNQ9ULZ1 77 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 TRAPPC1Q9Y5R8 145 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 DNAH2Q9P225 4427 aa3.13□□□□□ -1.91
RTN4-214ENST00000486085 KMT2CQ8NEZ4 4911 aaKnown RBP3.13□□□□□ -1.91
RTN4-214ENST00000486085 KMT2AQ03164 3969 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 TRBV6-8A0A0A6YYG3 113 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 MUC21A0A0G2JKD1 596 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 TRBV7-6A0A0J9YX20 115 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 MUC21A0A140T8X8 626 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 FAM236AA0A1B0GUQ0 79 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 FAM236BA0A1B0GV22 79 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 SDHAF1A6NFY7 115 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 I3L3M4 83 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 PSPHP1O15172 72 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 TMEM258P61165 79 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 HERVK_113P63121 156 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 LELP1Q5T871 98 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 FAM74A4Q5TZK3 123 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 C3orf22Q8N5N4 141 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 LINC00337Q8N6G1 96 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 Q8N8P6 123 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 SPANXA2-OT1Q8N9U9 137 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 C18orf32Q8TCD1 76 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 CHCHD1Q96BP2 118 aaKnown RBP3.12□□□□□ -1.91
RTN4-214ENST00000486085 ST20Q9HBF5 79 aa3.12□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BKO60814 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 NPYP01303 97 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 TRGC2P03986 189 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 MGPP08493 103 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
RTN4-214ENST00000486085 LGALS9CQ6DKI2 356 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 ATP6V0E2Q8NHE4 81 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 DPH3Q96FX2 82 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 HIST1H2BLQ99880 126 aa3.11□□□□□ -1.91
RTN4-214ENST00000486085 DNAH17Q9UFH2 4485 aa3.1□□□□□ -1.91
RTN4-214ENST00000486085 TRBV25-1A0A075B6N4 114 aa3.1□□□□□ -1.91
RTN4-214ENST00000486085 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
RTN4-214ENST00000486085 TMEM262E9PQX1 116 aa3.1□□□□□ -1.91
RTN4-214ENST00000486085 MP68P56378 58 aa3.1□□□□□ -1.91
RTN4-214ENST00000486085 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
RTN4-214ENST00000486085 MRPS36P82909 103 aaKnown RBP3.1□□□□□ -1.91
RTN4-214ENST00000486085 LINC01556Q5JQF7 62 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms