RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
LMBR1-217ENST00000485985 NDUFA5Q16718 116 aa12.2□□□□□ -0.46
LMBR1-217ENST00000485985 SFTA2Q6UW10 78 aa12.2□□□□□ -0.46
LMBR1-217ENST00000485985 M0R378 163 aa12.19□□□□□ -0.46
LMBR1-217ENST00000485985 RPL24P83731 157 aaKnown RBP12.19□□□□□ -0.46
LMBR1-217ENST00000485985 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
LMBR1-217ENST00000485985 TMEM223A0PJW6 202 aa12.18□□□□□ -0.46
LMBR1-217ENST00000485985 FAM229BQ4G0N7 80 aa12.18□□□□□ -0.46
LMBR1-217ENST00000485985 IFI27L1Q96BM0 104 aa12.17□□□□□ -0.46
LMBR1-217ENST00000485985 CHCHD1Q96BP2 118 aaKnown RBP12.17□□□□□ -0.46
LMBR1-217ENST00000485985 TRAV12-1A0A0B4J245 112 aa12.16□□□□□ -0.46
LMBR1-217ENST00000485985 A0A0U1RRA0 63 aa12.15□□□□□ -0.46
LMBR1-217ENST00000485985 LINC00158P58513 81 aa12.15□□□□□ -0.46
LMBR1-217ENST00000485985 LCE2AQ5TA79 106 aaPredicted RBP12.12□□□□□ -0.47
LMBR1-217ENST00000485985 CBLN2Q8IUK8 224 aa12.12□□□□□ -0.47
LMBR1-217ENST00000485985 LINC00304Q8N9R0 145 aa12.12□□□□□ -0.47
LMBR1-217ENST00000485985 FAM19A2Q8N3H0 131 aa12.11□□□□□ -0.47
LMBR1-217ENST00000485985 PLEKHB2Q96CS7 222 aa12.11□□□□□ -0.47
LMBR1-217ENST00000485985 RETNLBQ9BQ08 111 aa12.11□□□□□ -0.47
LMBR1-217ENST00000485985 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
LMBR1-217ENST00000485985 IGKV2D-26A0A0A0MRZ7 120 aa12.09□□□□□ -0.47
LMBR1-217ENST00000485985 HIGD2AQ9BW72 106 aa12.08□□□□□ -0.48
LMBR1-217ENST00000485985 HSBP1O75506 76 aa12.07□□□□□ -0.48
LMBR1-217ENST00000485985 C3orf22Q8N5N4 141 aa12.07□□□□□ -0.48
LMBR1-217ENST00000485985 LINC00310P59036 64 aa12.06□□□□□ -0.48
LMBR1-217ENST00000485985 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
LMBR1-217ENST00000485985 MIR7-3HGQ8N6C7 128 aa12.06□□□□□ -0.48
LMBR1-217ENST00000485985 NCR3O14931 201 aa12.05□□□□□ -0.48
LMBR1-217ENST00000485985 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
LMBR1-217ENST00000485985 H0Y8G0 127 aa12.04□□□□□ -0.48
LMBR1-217ENST00000485985 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
LMBR1-217ENST00000485985 HERV-K104P63124 156 aa12.04□□□□□ -0.48
LMBR1-217ENST00000485985 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
LMBR1-217ENST00000485985 PRYO14603 147 aa12.03□□□□□ -0.48
LMBR1-217ENST00000485985 TRGC2P03986 189 aa12.03□□□□□ -0.48
LMBR1-217ENST00000485985 SPRR4Q96PI1 79 aa12.03□□□□□ -0.48
LMBR1-217ENST00000485985 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
LMBR1-217ENST00000485985 FAT4Q6V0I7 4981 aa12.02□□□□□ -0.49
LMBR1-217ENST00000485985 SERF1AO75920 110 aa12.01□□□□□ -0.49
LMBR1-217ENST00000485985 SPRR1AP35321 89 aa12.01□□□□□ -0.49
LMBR1-217ENST00000485985 MYMXA0A1B0GTQ4 84 aa11.99□□□□□ -0.49
LMBR1-217ENST00000485985 KRTAP4-16G5E9R7 235 aaPredicted RBP11.99□□□□□ -0.49
LMBR1-217ENST00000485985 KCNQ1DNQ9H478 68 aa11.99□□□□□ -0.49
LMBR1-217ENST00000485985 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
LMBR1-217ENST00000485985 LINC00337Q8N6G1 96 aa11.98□□□□□ -0.49
LMBR1-217ENST00000485985 DAND5Q8N907 189 aa11.98□□□□□ -0.49
LMBR1-217ENST00000485985 TRBV10-3A0A0K0K1G6 114 aa11.97□□□□□ -0.49
LMBR1-217ENST00000485985 LEPROTO15243 131 aa11.96□□□□□ -0.49
LMBR1-217ENST00000485985 CTAG1AP78358 180 aa11.96□□□□□ -0.49
LMBR1-217ENST00000485985 CDIP1Q9H305 208 aa11.96□□□□□ -0.49
LMBR1-217ENST00000485985 LINC00587B1AMM8 73 aa11.95□□□□□ -0.5
LMBR1-217ENST00000485985 PLNP26678 52 aa11.95□□□□□ -0.5
LMBR1-217ENST00000485985 TPRXLQ17RH7 258 aa11.95□□□□□ -0.5
LMBR1-217ENST00000485985 MAP1LC3CQ9BXW4 147 aa11.95□□□□□ -0.5
LMBR1-217ENST00000485985 ZNF706Q9Y5V0 76 aaPredicted RBP11.95□□□□□ -0.5
LMBR1-217ENST00000485985 KRTAP9-6A0A140TA67 174 aa11.94□□□□□ -0.5
LMBR1-217ENST00000485985 SMCR5Q8TEV8 140 aa11.94□□□□□ -0.5
LMBR1-217ENST00000485985 PMCHL2Q9BQD1 86 aa11.94□□□□□ -0.5
LMBR1-217ENST00000485985 IGLV7-46A0A075B6I9 117 aa11.93□□□□□ -0.5
LMBR1-217ENST00000485985 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
LMBR1-217ENST00000485985 MUC17Q685J3 4493 aa11.93□□□□□ -0.5
LMBR1-217ENST00000485985 LOC107984156A0A0G2JMH3 177 aa11.92□□□□□ -0.5
LMBR1-217ENST00000485985 J3QQQ9 107 aa11.92□□□□□ -0.5
LMBR1-217ENST00000485985 FABP4P15090 132 aa11.92□□□□□ -0.5
LMBR1-217ENST00000485985 ARL17AQ8IVW1 177 aa11.92□□□□□ -0.5
LMBR1-217ENST00000485985 DPM2O94777 84 aa11.91□□□□□ -0.5
LMBR1-217ENST00000485985 PPDPFQ9H3Y8 114 aa11.91□□□□□ -0.5
LMBR1-217ENST00000485985 HSPB8Q9UJY1 196 aa11.91□□□□□ -0.5
LMBR1-217ENST00000485985 B5MCH6 92 aa11.89□□□□□ -0.51
LMBR1-217ENST00000485985 SPAG11AQ6PDA7 123 aa11.89□□□□□ -0.51
LMBR1-217ENST00000485985 SLC7A5P1Q8MH63 180 aa11.89□□□□□ -0.51
LMBR1-217ENST00000485985 Q8NBF4 154 aa11.89□□□□□ -0.51
LMBR1-217ENST00000485985 TRBV10-2A0A0K0K1G8 114 aa11.88□□□□□ -0.51
LMBR1-217ENST00000485985 COLCA2A8K830 154 aa11.88□□□□□ -0.51
LMBR1-217ENST00000485985 IGKCP01834 107 aa11.88□□□□□ -0.51
LMBR1-217ENST00000485985 DDTP30046 118 aa11.88□□□□□ -0.51
LMBR1-217ENST00000485985 LINC00483Q53H64 154 aa11.88□□□□□ -0.51
LMBR1-217ENST00000485985 ERC2-IT1O76042 136 aa11.87□□□□□ -0.51
LMBR1-217ENST00000485985 NMUP48645 174 aa11.87□□□□□ -0.51
LMBR1-217ENST00000485985 HERVK_113P61574 105 aa11.87□□□□□ -0.51
LMBR1-217ENST00000485985 LGALS3P17931 250 aaKnown RBP11.86□□□□□ -0.51
LMBR1-217ENST00000485985 Q9BRP9 147 aa11.86□□□□□ -0.51
LMBR1-217ENST00000485985 SPANXB1Q9NS25 103 aaPredicted RBP11.86□□□□□ -0.51
LMBR1-217ENST00000485985 EIF4EBP3O60516 100 aaPredicted RBP11.84□□□□□ -0.51
LMBR1-217ENST00000485985 S100A12P80511 92 aa11.84□□□□□ -0.51
LMBR1-217ENST00000485985 SOSTDC1Q6X4U4 206 aa11.84□□□□□ -0.51
LMBR1-217ENST00000485985 GAGE2AQ6NT46 116 aa11.83□□□□□ -0.52
LMBR1-217ENST00000485985 Q6ZRX8 168 aa11.83□□□□□ -0.52
LMBR1-217ENST00000485985 MIEN1Q9BRT3 115 aa11.83□□□□□ -0.52
LMBR1-217ENST00000485985 NDUFC2O95298 119 aa11.82□□□□□ -0.52
LMBR1-217ENST00000485985 IGLV6-57P01721 117 aa11.82□□□□□ -0.52
LMBR1-217ENST00000485985 C4orf48Q5BLP8 95 aa11.82□□□□□ -0.52
LMBR1-217ENST00000485985 NPC2P61916 151 aa11.81□□□□□ -0.52
LMBR1-217ENST00000485985 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
LMBR1-217ENST00000485985 FP248Q71RG6 208 aaPredicted RBP11.81□□□□□ -0.52
LMBR1-217ENST00000485985 A0A0J9YXY3 114 aa11.8□□□□□ -0.52
LMBR1-217ENST00000485985 MOBPQ13875 183 aa11.8□□□□□ -0.52
LMBR1-217ENST00000485985 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
LMBR1-217ENST00000485985 E9PLD3 99 aa11.79□□□□□ -0.52
LMBR1-217ENST00000485985 S100A7L2Q5SY68 101 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms