RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 HIST1H2BLQ99880 126 aa9.57□□□□□ -0.88
HDHD3-203ENST00000485934 SERTAD4-AS1Q5TG53 156 aa9.56□□□□□ -0.88
HDHD3-203ENST00000485934 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
HDHD3-203ENST00000485934 SMIM13P0DJ93 91 aa9.55□□□□□ -0.88
HDHD3-203ENST00000485934 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
HDHD3-203ENST00000485934 PSORS1C2Q9UIG4 136 aa9.55□□□□□ -0.88
HDHD3-203ENST00000485934 A0A0U1RRA0 63 aa9.54□□□□□ -0.88
HDHD3-203ENST00000485934 C1orf137Q5JT78 98 aa9.54□□□□□ -0.88
HDHD3-203ENST00000485934 SPINK6Q6UWN8 80 aa9.54□□□□□ -0.88
HDHD3-203ENST00000485934 C5orf52A6NGY3 159 aa9.53□□□□□ -0.88
HDHD3-203ENST00000485934 TSPEAR-AS2P59090 65 aa9.53□□□□□ -0.88
HDHD3-203ENST00000485934 MIR7-3HGQ8N6C7 128 aa9.53□□□□□ -0.88
HDHD3-203ENST00000485934 HSBP1L1C9JCN9 74 aa9.52□□□□□ -0.89
HDHD3-203ENST00000485934 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
HDHD3-203ENST00000485934 OXTP01178 125 aa9.51□□□□□ -0.89
HDHD3-203ENST00000485934 VPREB1P12018 145 aa9.5□□□□□ -0.89
HDHD3-203ENST00000485934 BOD1L2Q8IYS8 172 aa9.5□□□□□ -0.89
HDHD3-203ENST00000485934 LINC00167Q96N53 147 aa9.5□□□□□ -0.89
HDHD3-203ENST00000485934 IGKV2D-26A0A0A0MRZ7 120 aa9.49□□□□□ -0.89
HDHD3-203ENST00000485934 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
HDHD3-203ENST00000485934 A0A0J9YXY3 114 aa9.49□□□□□ -0.89
HDHD3-203ENST00000485934 ZNF815PA8K554 130 aa9.49□□□□□ -0.89
HDHD3-203ENST00000485934 IGLV7-43P04211 117 aa9.49□□□□□ -0.89
HDHD3-203ENST00000485934 REG3GQ6UW15 175 aa9.49□□□□□ -0.89
HDHD3-203ENST00000485934 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
HDHD3-203ENST00000485934 SRRM2Q9UQ35 2752 aaKnown RBP9.48□□□□□ -0.89
HDHD3-203ENST00000485934 M0R378 163 aa9.48□□□□□ -0.89
HDHD3-203ENST00000485934 TIMM17BO60830 172 aa9.48□□□□□ -0.89
HDHD3-203ENST00000485934 S100A12P80511 92 aa9.48□□□□□ -0.89
HDHD3-203ENST00000485934 SRSF9Q13242 221 aaKnown RBP eCLIP9.48□□□□□ -0.894e-6■□□□□ 8.5
HDHD3-203ENST00000485934 GAGE10A6NGK3 116 aa9.47□□□□□ -0.89
HDHD3-203ENST00000485934 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
HDHD3-203ENST00000485934 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
HDHD3-203ENST00000485934 DIRC1Q969H9 104 aa9.47□□□□□ -0.89
HDHD3-203ENST00000485934 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.9
HDHD3-203ENST00000485934 J3QL48 77 aa9.46□□□□□ -0.9
HDHD3-203ENST00000485934 SCGB1D1O95968 90 aa9.46□□□□□ -0.9
HDHD3-203ENST00000485934 HNRNPA3P51991 378 aaKnown RBP9.46□□□□□ -0.9
HDHD3-203ENST00000485934 SCGB1D4Q6XE38 83 aa9.46□□□□□ -0.9
HDHD3-203ENST00000485934 COPS9Q8WXC6 57 aa9.46□□□□□ -0.9
HDHD3-203ENST00000485934 BCE1O60756 84 aa9.45□□□□□ -0.9
HDHD3-203ENST00000485934 IGLV1-50A0A075B6I6 118 aa9.44□□□□□ -0.9
HDHD3-203ENST00000485934 RPL28P46779 137 aaKnown RBP9.44□□□□□ -0.9
HDHD3-203ENST00000485934 KRTAP11-1Q8IUC1 163 aa9.44□□□□□ -0.9
HDHD3-203ENST00000485934 VPS13BQ7Z7G8 4022 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 IGKV2-28A0A075B6P5 120 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 TRBV10-2A0A0K0K1G8 114 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 TMEM238C9JI98 176 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 ZNF861PO60384 105 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 NDUFC2O95298 119 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 IGKV2D-28P01615 120 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 DAND5Q8N907 189 aa9.43□□□□□ -0.9
HDHD3-203ENST00000485934 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
HDHD3-203ENST00000485934 Q6ZVH6 145 aa9.42□□□□□ -0.9
HDHD3-203ENST00000485934 CBY1Q9Y3M2 126 aa9.42□□□□□ -0.9
HDHD3-203ENST00000485934 SPANXB1Q9NS25 103 aaPredicted RBP9.41□□□□□ -0.9
HDHD3-203ENST00000485934 UBE2AP49459 152 aa9.4□□□□□ -0.9
HDHD3-203ENST00000485934 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
HDHD3-203ENST00000485934 H0Y9J4 135 aa9.39□□□□□ -0.91
HDHD3-203ENST00000485934 Q8NDZ9 215 aa9.39□□□□□ -0.91
HDHD3-203ENST00000485934 TMEM126AQ9H061 195 aa9.39□□□□□ -0.91
HDHD3-203ENST00000485934 NCR3O14931 201 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 IFITM1P13164 125 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 S100A7L2Q5SY68 101 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 LINC00518Q8N0U6 118 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 LITAFQ99732 161 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 TTTY13Q9BZ97 58 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
HDHD3-203ENST00000485934 FLG2Q5D862 2391 aaPredicted RBP9.38□□□□□ -0.91
HDHD3-203ENST00000485934 MYCBP2O75592 4640 aa9.37□□□□□ -0.91
HDHD3-203ENST00000485934 PRYO14603 147 aa9.37□□□□□ -0.91
HDHD3-203ENST00000485934 PCP2Q8IVA1 136 aa9.37□□□□□ -0.91
HDHD3-203ENST00000485934 LINC01600Q96MT4 127 aa9.37□□□□□ -0.91
HDHD3-203ENST00000485934 SPANXDQ9BXN6 97 aa9.37□□□□□ -0.91
HDHD3-203ENST00000485934 PPDPFQ9H3Y8 114 aa9.37□□□□□ -0.91
HDHD3-203ENST00000485934 KCNQ1DNQ9H478 68 aa9.37□□□□□ -0.91
HDHD3-203ENST00000485934 DDTP30046 118 aa9.36□□□□□ -0.91
HDHD3-203ENST00000485934 FAM19A1Q7Z5A9 133 aa9.36□□□□□ -0.91
HDHD3-203ENST00000485934 NPC2P61916 151 aa9.35□□□□□ -0.91
HDHD3-203ENST00000485934 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
HDHD3-203ENST00000485934 JOSD1Q15040 202 aaPredicted RBP9.34□□□□□ -0.91
HDHD3-203ENST00000485934 SOSTDC1Q6X4U4 206 aa9.34□□□□□ -0.91
HDHD3-203ENST00000485934 DMBT1Q9UGM3 2413 aaPredicted RBP9.33□□□□□ -0.92
HDHD3-203ENST00000485934 LINC00337Q8N6G1 96 aa9.33□□□□□ -0.92
HDHD3-203ENST00000485934 TMA7Q9Y2S6 64 aaKnown RBP9.33□□□□□ -0.92
HDHD3-203ENST00000485934 ETDCA0A1B0GVM5 59 aa9.32□□□□□ -0.92
HDHD3-203ENST00000485934 HINT1P49773 126 aaPredicted RBP9.32□□□□□ -0.92
HDHD3-203ENST00000485934 IGLV6-57P01721 117 aa9.31□□□□□ -0.92
HDHD3-203ENST00000485934 OR13C6PQ8NH95 151 aa9.31□□□□□ -0.92
HDHD3-203ENST00000485934 VAMP8Q9BV40 100 aa9.31□□□□□ -0.92
HDHD3-203ENST00000485934 DLEU1O43261 78 aa9.3□□□□□ -0.92
HDHD3-203ENST00000485934 COX8AP10176 69 aa9.3□□□□□ -0.92
HDHD3-203ENST00000485934 SPRR1AP35321 89 aa9.3□□□□□ -0.92
HDHD3-203ENST00000485934 KRTAP13-1Q8IUC0 172 aa9.3□□□□□ -0.92
HDHD3-203ENST00000485934 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
HDHD3-203ENST00000485934 RPL13AP40429 203 aaKnown RBP9.29□□□□□ -0.92
HDHD3-203ENST00000485934 TRAV23DV6A0A075B6W5 121 aa9.28□□□□□ -0.92
HDHD3-203ENST00000485934 PRLHP81277 87 aa9.28□□□□□ -0.92
HDHD3-203ENST00000485934 MUSTN1Q8IVN3 82 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms