RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 Q8IZM0 81 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 BIN3Q9NQY0 253 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 SPANXA1Q9NS26 97 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 NDUFA13Q9P0J0 144 aa2.75□□□□□ -1.97
PTPN4-210ENST00000485247 RAB5BP61020 215 aa2.74□□□□□ -1.97
PTPN4-210ENST00000485247 RPL37P61927 97 aaKnown RBP2.74□□□□□ -1.97
PTPN4-210ENST00000485247 SSBP3-AS1Q7Z2R9 100 aa2.74□□□□□ -1.97
PTPN4-210ENST00000485247 LINC01551Q86U37 167 aa2.74□□□□□ -1.97
PTPN4-210ENST00000485247 LINC01561Q8N1V8 128 aa2.74□□□□□ -1.97
PTPN4-210ENST00000485247 C11orf52Q96A22 123 aa2.74□□□□□ -1.97
PTPN4-210ENST00000485247 SMIM12Q96EX1 92 aa2.74□□□□□ -1.97
PTPN4-210ENST00000485247 GEMIN7Q9H840 131 aaKnown RBP2.74□□□□□ -1.97
PTPN4-210ENST00000485247 ATP6V1G1O75348 118 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 PPP1R17O96001 155 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 NDUFV3P56181 108 aaKnown RBP2.73□□□□□ -1.97
PTPN4-210ENST00000485247 HERV-K104P63124 156 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 Q5BKY6 102 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 FAM213BQ8TBF2 198 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 MBD3L1Q8WWY6 194 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 BORCS7Q96B45 105 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 TIMM17AQ99595 171 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 TMEM191AQ9H0A3 160 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
PTPN4-210ENST00000485247 IGLV4-3A0A075B6K6 122 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 K7EN84 100 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 PPP1R2P9O14990 202 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 GIPP09681 153 aaPredicted RBP2.72□□□□□ -1.97
PTPN4-210ENST00000485247 IFI27P40305 119 aaPredicted RBP2.72□□□□□ -1.97
PTPN4-210ENST00000485247 RIGQ13278 110 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 LINC00483Q53H64 154 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 AKAP14Q86UN6 197 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 SMCR5Q8TEV8 140 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 GNG13Q9P2W3 67 aa2.72□□□□□ -1.97
PTPN4-210ENST00000485247 FXYD6-FXYD2A0A087WZ82 144 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 A0A0U1RRA0 63 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 TCAPO15273 167 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 GATCO43716 136 aaKnown RBP2.71□□□□□ -1.98
PTPN4-210ENST00000485247 LGALS3P17931 250 aaKnown RBP2.71□□□□□ -1.98
PTPN4-210ENST00000485247 CXCL5P42830 114 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 TEX43Q6ZNM6 134 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 FAM231DQ6ZW35 169 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 TMEM141Q96I45 108 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 C2orf88Q9BSF0 95 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 EIF5A2Q9GZV4 153 aaKnown RBP2.71□□□□□ -1.98
PTPN4-210ENST00000485247 MED9Q9NWA0 146 aa2.71□□□□□ -1.98
PTPN4-210ENST00000485247 A0A1B0GUT8 65 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 A8MWL6 223 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 RAB14P61106 215 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 C9orf153Q5TBE3 101 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 HRCT1Q6UXD1 115 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 FAM19A3Q7Z5A8 133 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 MANBALQ9NQG1 85 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 CDKN2A-AS1Q9UH64 79 aa2.7□□□□□ -1.98
PTPN4-210ENST00000485247 C20orf202A1L168 122 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 PFN2P35080 140 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 MRPL51Q4U2R6 128 aaKnown RBP2.69□□□□□ -1.98
PTPN4-210ENST00000485247 Q8NDZ9 215 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 C20orf78Q9BR46 151 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 SMIM2Q9BVW6 85 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 OCR1Q9BZK8 76 aa2.69□□□□□ -1.98
PTPN4-210ENST00000485247 CHTOPQ9Y3Y2 248 aaKnown RBP2.69□□□□□ -1.98
PTPN4-210ENST00000485247 TRBV24-1A0A075B6N3 115 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 HIGD1CA8MV81 97 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 UMAD1C9J7I0 102 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 PDE6DO43924 150 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 COX7B2Q8TF08 81 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 LIMD2Q9BT23 127 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 VCX2Q9H322 139 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 SND1-IT1Q9HBX3 110 aa2.68□□□□□ -1.98
PTPN4-210ENST00000485247 ERC2-IT1O76042 136 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 RAB5AP20339 215 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 CKS2P33552 79 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 HERVK_113P63121 156 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 IFITM3Q01628 133 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 C2orf66Q6UXQ4 117 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 LINC00518Q8N0U6 118 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 AMELXQ99217 191 aa2.67□□□□□ -1.98
PTPN4-210ENST00000485247 ETDCA0A1B0GVM5 59 aa2.66□□□□□ -1.98
PTPN4-210ENST00000485247 LINC00862A6NCI5 91 aa2.66□□□□□ -1.98
PTPN4-210ENST00000485247 ARPC5O15511 151 aa2.66□□□□□ -1.98
PTPN4-210ENST00000485247 ATP5LO75964 103 aa2.66□□□□□ -1.98
PTPN4-210ENST00000485247 NPYP01303 97 aa2.66□□□□□ -1.98
PTPN4-210ENST00000485247 FAM104BQ5XKR9 115 aa2.66□□□□□ -1.98
PTPN4-210ENST00000485247 KMT2DO14686 5537 aa2.65□□□□□ -1.98
PTPN4-210ENST00000485247 LOC389332A0A1B0GUA5 103 aa2.65□□□□□ -1.99
PTPN4-210ENST00000485247 D6R8Y8 96 aa2.65□□□□□ -1.99
PTPN4-210ENST00000485247 SPRR1AP35321 89 aa2.65□□□□□ -1.99
PTPN4-210ENST00000485247 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
PTPN4-210ENST00000485247 SEC11AP67812 179 aa2.65□□□□□ -1.99
PTPN4-210ENST00000485247 PDZD11Q5EBL8 140 aa2.65□□□□□ -1.99
PTPN4-210ENST00000485247 H7C2G1 150 aa2.64□□□□□ -1.99
PTPN4-210ENST00000485247 SPINK8P0C7L1 97 aa2.64□□□□□ -1.99
PTPN4-210ENST00000485247 ATP11AUNQ6ZP68 121 aa2.64□□□□□ -1.99
PTPN4-210ENST00000485247 C20orf166-AS1Q96NR2 134 aa2.64□□□□□ -1.99
PTPN4-210ENST00000485247 TRBV20-1A0A075B6N2 111 aa2.63□□□□□ -1.99
PTPN4-210ENST00000485247 TEX46H3BTG2 121 aa2.63□□□□□ -1.99
PTPN4-210ENST00000485247 ERASQ7Z444 233 aa2.63□□□□□ -1.99
PTPN4-210ENST00000485247 ZNF625Q96I27 306 aaPredicted RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms