RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 DOPEY2Q9Y3R5 2298 aa3.21□□□□□ -1.9
SSBP1-211ENST00000484178 AKAP13Q12802 2813 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 IGLV4-60A0A075B6I1 120 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 IGKV3D-7A0A0C4DH55 119 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 NCR3O14931 201 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 IGLV6-57P01721 117 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 APOC4P55056 127 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 KIAA0087Q14695 138 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 Q6ZQT0 140 aa3.2□□□□□ -1.9
SSBP1-211ENST00000484178 TACC2O95359 2948 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 FAM236DA0A1B0GTK5 79 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 H3BNG1 76 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 FAM236CP0DP71 79 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 MIFP14174 115 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 XCL1P47992 114 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 LELP1Q5T871 98 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 DIRC1Q969H9 104 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 DHRS4-AS1Q9P1J3 65 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 LAMTOR3Q9UHA4 124 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 HRNRQ86YZ3 2850 aaPredicted RBP3.19□□□□□ -1.9
SSBP1-211ENST00000484178 DMDP11532 3685 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 DMXL2Q8TDJ6 3036 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 MUC6Q6W4X9 2439 aa3.19□□□□□ -1.9
SSBP1-211ENST00000484178 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.19□□□□□ -1.93e-19■■■■■ 37.9
SSBP1-211ENST00000484178 COL6A6A6NMZ7 2263 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 CEP295Q9C0D2 2601 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 SMIM26A0A096LP01 95 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 PRM2P04554 102 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 REG3AQ06141 175 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 PRR4Q16378 134 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 C6orf99Q4VX62 202 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 LINC01006Q8NI28 216 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 PRR34Q9NV39 138 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 V9GYY9 64 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 ABCA2Q9BZC7 2435 aa3.18□□□□□ -1.9
SSBP1-211ENST00000484178 SPTBN1Q01082 2364 aaKnown RBP3.17□□□□□ -1.9
SSBP1-211ENST00000484178 TRAV23DV6A0A075B6W5 121 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 IGKV3OR2-268A0A0C4DH90 116 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 TRBV7-4A0A0J9YYF1 115 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 M0R378 163 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 COX7BP24311 80 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 SPAG11BQ08648 103 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 EGFEM1PQ0D2K5 195 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 ENHOQ6UWT2 76 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 DMXL1Q9Y485 3027 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 DOPEY1Q5JWR5 2465 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 HIVEP3Q5T1R4 2406 aa3.17□□□□□ -1.9
SSBP1-211ENST00000484178 NACAE9PAV3 2078 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 ATMQ13315 3056 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 MED13LQ71F56 2210 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 LRBAP50851 2863 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 BSNQ9UPA5 3926 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 ANGP03950 147 aaKnown RBP3.16□□□□□ -1.9
SSBP1-211ENST00000484178 SPART-AS1P0CW21 52 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 DEFB130BP0DP73 79 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 DEFB130AP0DP74 79 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
SSBP1-211ENST00000484178 DAD1P61803 113 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 LINC00269Q8N2A0 174 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 Q8N377 158 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 CREBBPQ92793 2442 aa3.16□□□□□ -1.9
SSBP1-211ENST00000484178 MUC3AQ02505 3323 aa3.15□□□□□ -1.9
SSBP1-211ENST00000484178 SPENQ96T58 3664 aaKnown RBP3.15□□□□□ -1.91
SSBP1-211ENST00000484178 A0A087WVE0 104 aa3.15□□□□□ -1.91
SSBP1-211ENST00000484178 ZNF73O43830 326 aaPredicted RBP3.15□□□□□ -1.91
SSBP1-211ENST00000484178 HAMPP81172 84 aa3.15□□□□□ -1.91
SSBP1-211ENST00000484178 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.91
SSBP1-211ENST00000484178 C20orf197Q8N268 126 aa3.15□□□□□ -1.91
SSBP1-211ENST00000484178 NKAPP1Q8N9T2 125 aa3.15□□□□□ -1.91
SSBP1-211ENST00000484178 DCHS2Q6V1P9 2916 aa3.14□□□□□ -1.91
SSBP1-211ENST00000484178 SPTAN1Q13813 2472 aaKnown RBP3.14□□□□□ -1.91
SSBP1-211ENST00000484178 H7BZZ5 65 aa3.14□□□□□ -1.91
SSBP1-211ENST00000484178 Q6ZQY7 126 aa3.14□□□□□ -1.91
SSBP1-211ENST00000484178 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
SSBP1-211ENST00000484178 CELA1Q9UNI1 258 aa3.14□□□□□ -1.91
SSBP1-211ENST00000484178 ZFHX4Q86UP3 3567 aa3.14□□□□□ -1.91
SSBP1-211ENST00000484178 AKAP6Q13023 2319 aa3.13□□□□□ -1.91
SSBP1-211ENST00000484178 FUSP35637 526 aaKnown RBP eCLIP3.13□□□□□ -1.91
SSBP1-211ENST00000484178 HIGD2BQ4VC39 106 aa3.13□□□□□ -1.91
SSBP1-211ENST00000484178 FAM19A1Q7Z5A9 133 aa3.13□□□□□ -1.91
SSBP1-211ENST00000484178 C3orf56Q8N813 242 aa3.13□□□□□ -1.91
SSBP1-211ENST00000484178 C11orf68Q9H3H3 251 aaKnown RBP3.13□□□□□ -1.91
SSBP1-211ENST00000484178 IGLV8-61A0A075B6I0 122 aa3.12□□□□□ -1.91
SSBP1-211ENST00000484178 BPY2O14599 106 aa3.12□□□□□ -1.91
SSBP1-211ENST00000484178 NREPQ16612 68 aa3.12□□□□□ -1.91
SSBP1-211ENST00000484178 SMG1Q96Q15 3661 aaKnown RBP3.12□□□□□ -1.91
SSBP1-211ENST00000484178 IGF2RP11717 2491 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 IGLV5-48A0A075B6I7 105 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 KRTAP16-1A8MUX0 517 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 NDUFB1O75438 58 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 TLX1NBP0CAT3 122 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 Q5XG85 94 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 UNQ6190/PRO20217Q6UXQ8 127 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 TMEM254Q8TBM7 123 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 CAMK2N2Q96S95 79 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 KCNQ1DNQ9H478 68 aa3.11□□□□□ -1.91
SSBP1-211ENST00000484178 Q8NAQ8 132 aa3.1□□□□□ -1.91
SSBP1-211ENST00000484178 RMI2Q96E14 147 aa3.1□□□□□ -1.91
SSBP1-211ENST00000484178 C6orf48Q9UBA6 75 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms