RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ATP11AUNQ6ZP68 121 aa5.37□□□□□ -1.55
COL4A5-205ENST00000483338 ACANP16112 2415 aa5.37□□□□□ -1.55
COL4A5-205ENST00000483338 NDUFA4O00483 81 aa5.37□□□□□ -1.55
COL4A5-205ENST00000483338 UBE2L6O14933 153 aa5.37□□□□□ -1.55
COL4A5-205ENST00000483338 PRM2P04554 102 aa5.37□□□□□ -1.55
COL4A5-205ENST00000483338 MUC7Q8TAX7 377 aa5.37□□□□□ -1.55
COL4A5-205ENST00000483338 CDC42SE2Q9NRR3 84 aa5.37□□□□□ -1.55
COL4A5-205ENST00000483338 PRB2P02812 416 aaPredicted RBP5.36□□□□□ -1.55
COL4A5-205ENST00000483338 DIRC1Q969H9 104 aa5.36□□□□□ -1.55
COL4A5-205ENST00000483338 TRBV6-8A0A0A6YYG3 113 aa5.36□□□□□ -1.55
COL4A5-205ENST00000483338 PRR4Q16378 134 aa5.36□□□□□ -1.55
COL4A5-205ENST00000483338 LINC00612Q8N6U2 182 aa5.36□□□□□ -1.55
COL4A5-205ENST00000483338 C7orf65Q6ZTY9 151 aa5.36□□□□□ -1.55
COL4A5-205ENST00000483338 IGHV3-53P01767 116 aa5.35□□□□□ -1.55
COL4A5-205ENST00000483338 KRTAP10-9P60411 292 aa5.35□□□□□ -1.55
COL4A5-205ENST00000483338 LINC00575Q6W349 94 aa5.35□□□□□ -1.55
COL4A5-205ENST00000483338 ANKRD17O75179 2603 aaKnown RBP5.35□□□□□ -1.55
COL4A5-205ENST00000483338 PDE6GP18545 87 aa5.35□□□□□ -1.55
COL4A5-205ENST00000483338 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
COL4A5-205ENST00000483338 MINOS1-NBL1R4GNA1 71 aa5.35□□□□□ -1.55
COL4A5-205ENST00000483338 LCE6AA0A183 80 aa5.34□□□□□ -1.55
COL4A5-205ENST00000483338 FAM30AQ9NZY2 134 aa5.34□□□□□ -1.55
COL4A5-205ENST00000483338 IGLV4-60A0A075B6I1 120 aa5.34□□□□□ -1.55
COL4A5-205ENST00000483338 A8MTW9 85 aa5.34□□□□□ -1.55
COL4A5-205ENST00000483338 IGHV4-31P0DP07 118 aa5.34□□□□□ -1.55
COL4A5-205ENST00000483338 ZCCHC13Q8WW36 166 aaKnown RBP5.34□□□□□ -1.55
COL4A5-205ENST00000483338 CYP4F30PQ9H0H9 118 aa5.34□□□□□ -1.55
COL4A5-205ENST00000483338 CELA1Q9UNI1 258 aa5.34□□□□□ -1.55
COL4A5-205ENST00000483338 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.56
COL4A5-205ENST00000483338 CR1P17927 2039 aa5.33□□□□□ -1.56
COL4A5-205ENST00000483338 IGHV4-38-2P0DP08 117 aa5.33□□□□□ -1.56
COL4A5-205ENST00000483338 KMT2BQ9UMN6 2715 aaPredicted RBP5.33□□□□□ -1.56
COL4A5-205ENST00000483338 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
COL4A5-205ENST00000483338 DEFB136Q30KP8 78 aa5.32□□□□□ -1.56
COL4A5-205ENST00000483338 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.31□□□□□ -1.56
COL4A5-205ENST00000483338 SMIM29Q86T20 159 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
COL4A5-205ENST00000483338 C10orf99Q6UWK7 81 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 Q6ZQY7 126 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 CELSR1Q9NYQ6 3014 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 BAHCC1Q9P281 2608 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 DEFB131AP59861 70 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 DEFB113Q30KQ7 82 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 C11orf71Q6IPW1 123 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 PRR15LQ9BU68 103 aa5.31□□□□□ -1.56
COL4A5-205ENST00000483338 IGHV4-61A0A0C4DH41 118 aa5.3□□□□□ -1.56
COL4A5-205ENST00000483338 IGHV4-30-2A0A087WSY4 118 aa5.3□□□□□ -1.56
COL4A5-205ENST00000483338 IGHV3OR16-9A0A0B4J2B5 98 aa5.3□□□□□ -1.56
COL4A5-205ENST00000483338 CUBNO60494 3623 aa5.3□□□□□ -1.56
COL4A5-205ENST00000483338 GCN1Q92616 2671 aaKnown RBP5.3□□□□□ -1.56
COL4A5-205ENST00000483338 LMO4P61968 165 aa5.29□□□□□ -1.56
COL4A5-205ENST00000483338 C5orf56Q8N8D9 126 aa5.29□□□□□ -1.56
COL4A5-205ENST00000483338 Q8NDZ9 215 aa5.29□□□□□ -1.56
COL4A5-205ENST00000483338 A6NED7 52 aa5.29□□□□□ -1.56
COL4A5-205ENST00000483338 IGHV4-59P01825 116 aa5.29□□□□□ -1.56
COL4A5-205ENST00000483338 DSCR9P59020 149 aa5.29□□□□□ -1.56
COL4A5-205ENST00000483338 LIMD2Q9BT23 127 aa5.29□□□□□ -1.56
COL4A5-205ENST00000483338 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.28□□□□□ -1.56
COL4A5-205ENST00000483338 UNC79Q9P2D8 2635 aa5.28□□□□□ -1.56
COL4A5-205ENST00000483338 Q75L30 129 aa5.28□□□□□ -1.56
COL4A5-205ENST00000483338 NKAPP1Q8N9T2 125 aa5.28□□□□□ -1.56
COL4A5-205ENST00000483338 MDFIQ99750 246 aa5.28□□□□□ -1.56
COL4A5-205ENST00000483338 TRGV1A0A0A0MS02 117 aa5.27□□□□□ -1.57
COL4A5-205ENST00000483338 MOBPQ13875 183 aa5.27□□□□□ -1.57
COL4A5-205ENST00000483338 UTP20O75691 2785 aaKnown RBP5.27□□□□□ -1.57
COL4A5-205ENST00000483338 F8P00451 2351 aa5.27□□□□□ -1.57
COL4A5-205ENST00000483338 CDC42SE1Q9NRR8 79 aa5.27□□□□□ -1.57
COL4A5-205ENST00000483338 COX7BP24311 80 aa5.26□□□□□ -1.57
COL4A5-205ENST00000483338 B4DSR2 109 aa5.26□□□□□ -1.57
COL4A5-205ENST00000483338 ST20-AS1Q8NBB2 130 aa5.26□□□□□ -1.57
COL4A5-205ENST00000483338 USMG5Q96IX5 58 aa5.26□□□□□ -1.57
COL4A5-205ENST00000483338 KLK12Q9UKR0 248 aa5.26□□□□□ -1.57
COL4A5-205ENST00000483338 ITPR2Q14571 2701 aa5.26□□□□□ -1.57
COL4A5-205ENST00000483338 TRGV2A0A075B6R0 118 aa5.25□□□□□ -1.57
COL4A5-205ENST00000483338 ITPR3Q14573 2671 aa5.25□□□□□ -1.57
COL4A5-205ENST00000483338 CSMD2Q7Z408 3487 aa5.25□□□□□ -1.57
COL4A5-205ENST00000483338 DEFB112Q30KQ8 113 aa5.25□□□□□ -1.57
COL4A5-205ENST00000483338 MSMBP08118 114 aa5.24□□□□□ -1.57
COL4A5-205ENST00000483338 SLURP1P55000 103 aa5.24□□□□□ -1.57
COL4A5-205ENST00000483338 B9D2Q9BPU9 175 aa5.24□□□□□ -1.57
COL4A5-205ENST00000483338 UBR5O95071 2799 aaPredicted RBP5.24□□□□□ -1.57
COL4A5-205ENST00000483338 PRAC1Q96KF2 57 aa5.24□□□□□ -1.57
COL4A5-205ENST00000483338 CRYBG3Q68DQ2 2970 aa5.24□□□□□ -1.57
COL4A5-205ENST00000483338 FLNAP21333 2647 aaKnown RBP5.23□□□□□ -1.57
COL4A5-205ENST00000483338 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
COL4A5-205ENST00000483338 H3BQ85 93 aa5.23□□□□□ -1.57
COL4A5-205ENST00000483338 BSNQ9UPA5 3926 aa5.23□□□□□ -1.57
COL4A5-205ENST00000483338 ETDCA0A1B0GVM5 59 aa5.23□□□□□ -1.57
COL4A5-205ENST00000483338 C3orf84H3BNL1 204 aa5.23□□□□□ -1.57
COL4A5-205ENST00000483338 LINC00313P59037 77 aa5.23□□□□□ -1.57
COL4A5-205ENST00000483338 A0A096LPF7 62 aa5.22□□□□□ -1.57
COL4A5-205ENST00000483338 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
COL4A5-205ENST00000483338 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
COL4A5-205ENST00000483338 DEFB114Q30KQ6 69 aa5.22□□□□□ -1.57
COL4A5-205ENST00000483338 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
COL4A5-205ENST00000483338 TEP1Q99973 2627 aaKnown RBP5.22□□□□□ -1.57
COL4A5-205ENST00000483338 HRNRQ86YZ3 2850 aaPredicted RBP5.21□□□□□ -1.57
COL4A5-205ENST00000483338 CLPSL2Q6UWE3 100 aa5.21□□□□□ -1.57
COL4A5-205ENST00000483338 IGHV4-30-4P0DP06 118 aa5.21□□□□□ -1.58
COL4A5-205ENST00000483338 Q8IZM0 81 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 236.8 ms