RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PAM16Q9Y3D7 125 aa8.56□□□□□ -1.04
VARS-225ENST00000482996 M0QXV9 152 aa8.55□□□□□ -1.04
VARS-225ENST00000482996 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
VARS-225ENST00000482996 UBE2BP63146 152 aa8.55□□□□□ -1.04
VARS-225ENST00000482996 C9orf129Q5T035 196 aaKnown RBP8.55□□□□□ -1.04
VARS-225ENST00000482996 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
VARS-225ENST00000482996 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
VARS-225ENST00000482996 SPATA45Q537H7 98 aa8.54□□□□□ -1.04
VARS-225ENST00000482996 LINC00518Q8N0U6 118 aa8.54□□□□□ -1.04
VARS-225ENST00000482996 TNXBP22105 4242 aa8.53□□□□□ -1.04
VARS-225ENST00000482996 TSTD3H0UI37 97 aa8.52□□□□□ -1.05
VARS-225ENST00000482996 KRTAP7-1Q8IUC3 87 aa8.52□□□□□ -1.05
VARS-225ENST00000482996 XAGE1AQ9HD64 81 aa8.52□□□□□ -1.05
VARS-225ENST00000482996 IGLV7-43P04211 117 aa8.51□□□□□ -1.05
VARS-225ENST00000482996 ZNF22P17026 224 aaPredicted RBP8.51□□□□□ -1.05
VARS-225ENST00000482996 NMUP48645 174 aa8.51□□□□□ -1.05
VARS-225ENST00000482996 PLA2G2DQ9UNK4 145 aa8.51□□□□□ -1.05
VARS-225ENST00000482996 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
VARS-225ENST00000482996 DIRC1Q969H9 104 aa8.5□□□□□ -1.05
VARS-225ENST00000482996 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
VARS-225ENST00000482996 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
VARS-225ENST00000482996 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
VARS-225ENST00000482996 HMCN2Q8NDA2 5059 aa8.49□□□□□ -1.05
VARS-225ENST00000482996 E9PLD3 99 aa8.48□□□□□ -1.05
VARS-225ENST00000482996 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
VARS-225ENST00000482996 PLEKHB2Q96CS7 222 aa8.48□□□□□ -1.05
VARS-225ENST00000482996 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
VARS-225ENST00000482996 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
VARS-225ENST00000482996 TP73-AS1Q9UF72 201 aa8.47□□□□□ -1.05
VARS-225ENST00000482996 LEPROTO15243 131 aa8.46□□□□□ -1.06
VARS-225ENST00000482996 KRTAP10-8P60410 259 aa8.46□□□□□ -1.06
VARS-225ENST00000482996 SLC25A34Q6PIV7 304 aa8.45□□□□□ -1.06
VARS-225ENST00000482996 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
VARS-225ENST00000482996 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
VARS-225ENST00000482996 UQCR10Q9UDW1 63 aa8.45□□□□□ -1.06
VARS-225ENST00000482996 H0Y9J4 135 aa8.44□□□□□ -1.06
VARS-225ENST00000482996 J3QQQ9 107 aa8.44□□□□□ -1.06
VARS-225ENST00000482996 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
VARS-225ENST00000482996 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
VARS-225ENST00000482996 COX8AP10176 69 aa8.43□□□□□ -1.06
VARS-225ENST00000482996 PFN2P35080 140 aa8.43□□□□□ -1.06
VARS-225ENST00000482996 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
VARS-225ENST00000482996 C14orf144Q96I85 54 aa8.43□□□□□ -1.06
VARS-225ENST00000482996 COX17Q14061 63 aa8.42□□□□□ -1.06
VARS-225ENST00000482996 SCGB1D4Q6XE38 83 aa8.42□□□□□ -1.06
VARS-225ENST00000482996 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
VARS-225ENST00000482996 IGLV5-37A0A075B6J1 123 aa8.41□□□□□ -1.06
VARS-225ENST00000482996 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
VARS-225ENST00000482996 MYMXA0A1B0GTQ4 84 aa8.41□□□□□ -1.06
VARS-225ENST00000482996 ZNF625Q96I27 306 aaPredicted RBP8.41□□□□□ -1.06
VARS-225ENST00000482996 LINC00167Q96N53 147 aa8.41□□□□□ -1.06
VARS-225ENST00000482996 GAGE10A6NGK3 116 aa8.4□□□□□ -1.06
VARS-225ENST00000482996 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
VARS-225ENST00000482996 ZNF861PO60384 105 aa8.4□□□□□ -1.06
VARS-225ENST00000482996 MIEN1Q9BRT3 115 aa8.4□□□□□ -1.06
VARS-225ENST00000482996 NDUFA12Q9UI09 145 aa8.4□□□□□ -1.06
VARS-225ENST00000482996 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
VARS-225ENST00000482996 BCE1O60756 84 aa8.39□□□□□ -1.07
VARS-225ENST00000482996 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
VARS-225ENST00000482996 SND1-IT1Q9HBX3 110 aa8.39□□□□□ -1.07
VARS-225ENST00000482996 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
VARS-225ENST00000482996 DLEU1O43261 78 aa8.38□□□□□ -1.07
VARS-225ENST00000482996 RPL28P46779 137 aaKnown RBP8.38□□□□□ -1.07
VARS-225ENST00000482996 BOD1L2Q8IYS8 172 aa8.38□□□□□ -1.07
VARS-225ENST00000482996 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
VARS-225ENST00000482996 LINC00158P58513 81 aa8.37□□□□□ -1.07
VARS-225ENST00000482996 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
VARS-225ENST00000482996 HERV-K104P63124 156 aa8.37□□□□□ -1.07
VARS-225ENST00000482996 RPL24P83731 157 aaKnown RBP8.37□□□□□ -1.07
VARS-225ENST00000482996 MEIG1Q5JSS6 88 aa8.37□□□□□ -1.07
VARS-225ENST00000482996 DDTP30046 118 aa8.36□□□□□ -1.07
VARS-225ENST00000482996 TTTY13Q9BZ97 58 aa8.36□□□□□ -1.07
VARS-225ENST00000482996 LINC00587B1AMM8 73 aa8.35□□□□□ -1.07
VARS-225ENST00000482996 TMEM238C9JI98 176 aa8.35□□□□□ -1.07
VARS-225ENST00000482996 KRTAP1-4P0C5Y4 121 aa8.35□□□□□ -1.07
VARS-225ENST00000482996 VPREB1P12018 145 aa8.35□□□□□ -1.07
VARS-225ENST00000482996 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
VARS-225ENST00000482996 IGKV2-28A0A075B6P5 120 aa8.33□□□□□ -1.08
VARS-225ENST00000482996 IGKV2D-28P01615 120 aa8.33□□□□□ -1.08
VARS-225ENST00000482996 UBE2AP49459 152 aa8.33□□□□□ -1.08
VARS-225ENST00000482996 A0A0J9YXY3 114 aa8.32□□□□□ -1.08
VARS-225ENST00000482996 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
VARS-225ENST00000482996 HIST1H4GQ99525 98 aa8.32□□□□□ -1.08
VARS-225ENST00000482996 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
VARS-225ENST00000482996 SMIM13P0DJ93 91 aa8.31□□□□□ -1.08
VARS-225ENST00000482996 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
VARS-225ENST00000482996 M0R143 59 aa8.3□□□□□ -1.08
VARS-225ENST00000482996 HSD52Q0P140 79 aa8.3□□□□□ -1.08
VARS-225ENST00000482996 TIMM17BO60830 172 aa8.29□□□□□ -1.08
VARS-225ENST00000482996 CTAG1AP78358 180 aa8.29□□□□□ -1.08
VARS-225ENST00000482996 C2orf91Q6ZV80 131 aa8.29□□□□□ -1.08
VARS-225ENST00000482996 TAL2Q16559 108 aa8.28□□□□□ -1.08
VARS-225ENST00000482996 Q6ZVH6 145 aa8.28□□□□□ -1.08
VARS-225ENST00000482996 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
VARS-225ENST00000482996 MIR7-3HGQ8N6C7 128 aa8.28□□□□□ -1.08
VARS-225ENST00000482996 Q8NDZ9 215 aa8.28□□□□□ -1.08
VARS-225ENST00000482996 TMEM126AQ9H061 195 aa8.28□□□□□ -1.08
VARS-225ENST00000482996 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
VARS-225ENST00000482996 LRP2P98164 4655 aa8.27□□□□□ -1.08
VARS-225ENST00000482996 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms