RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 MRPL55Q7Z7F7 128 aaKnown RBP12.9□□□□□ -0.34
SEC13-217ENST00000482647 KRTAP11-1Q8IUC1 163 aa12.9□□□□□ -0.34
SEC13-217ENST00000482647 S100A6P06703 90 aa12.89□□□□□ -0.35
SEC13-217ENST00000482647 SMIM13P0DJ93 91 aa12.89□□□□□ -0.35
SEC13-217ENST00000482647 NMUP48645 174 aa12.89□□□□□ -0.35
SEC13-217ENST00000482647 IGLV5-37A0A075B6J1 123 aa12.88□□□□□ -0.35
SEC13-217ENST00000482647 A0A0U1RRA0 63 aa12.88□□□□□ -0.35
SEC13-217ENST00000482647 C20orf202A1L168 122 aa12.88□□□□□ -0.35
SEC13-217ENST00000482647 KRTAP29-1A8MX34 341 aaPredicted RBP12.88□□□□□ -0.35
SEC13-217ENST00000482647 E9PLD3 99 aa12.88□□□□□ -0.35
SEC13-217ENST00000482647 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
SEC13-217ENST00000482647 NKAPP1Q8N9T2 125 aa12.88□□□□□ -0.35
SEC13-217ENST00000482647 LRP1Q07954 4544 aaKnown RBP12.87□□□□□ -0.35
SEC13-217ENST00000482647 OXTP01178 125 aa12.87□□□□□ -0.35
SEC13-217ENST00000482647 S100A2P29034 98 aa12.87□□□□□ -0.35
SEC13-217ENST00000482647 RPL24P83731 157 aaKnown RBP12.87□□□□□ -0.35
SEC13-217ENST00000482647 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEC13-217ENST00000482647 HIST3H2BBQ8N257 126 aa12.86□□□□□ -0.35
SEC13-217ENST00000482647 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
SEC13-217ENST00000482647 J3QL48 77 aa12.85□□□□□ -0.35
SEC13-217ENST00000482647 LINC00167Q96N53 147 aa12.85□□□□□ -0.35
SEC13-217ENST00000482647 DMBT1Q9UGM3 2413 aaPredicted RBP12.85□□□□□ -0.35
SEC13-217ENST00000482647 HERC1Q15751 4861 aa12.84□□□□□ -0.35
SEC13-217ENST00000482647 GAGE10A6NGK3 116 aa12.83□□□□□ -0.36
SEC13-217ENST00000482647 IGLV7-43P04211 117 aa12.83□□□□□ -0.36
SEC13-217ENST00000482647 VPREB1P12018 145 aa12.83□□□□□ -0.36
SEC13-217ENST00000482647 AKR1D1P51857 326 aa12.83□□□□□ -0.36
SEC13-217ENST00000482647 MIR7-3HGQ8N6C7 128 aa12.83□□□□□ -0.36
SEC13-217ENST00000482647 HIST1H2BLQ99880 126 aa12.83□□□□□ -0.36
SEC13-217ENST00000482647 RPL37AP8A6NKH3 93 aa12.82□□□□□ -0.36
SEC13-217ENST00000482647 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
SEC13-217ENST00000482647 REG3GQ6UW15 175 aa12.78□□□□□ -0.36
SEC13-217ENST00000482647 BOD1L2Q8IYS8 172 aa12.78□□□□□ -0.36
SEC13-217ENST00000482647 A0A0J9YXY3 114 aa12.77□□□□□ -0.37
SEC13-217ENST00000482647 Q8NDZ9 215 aa12.77□□□□□ -0.37
SEC13-217ENST00000482647 DIRC1Q969H9 104 aa12.77□□□□□ -0.37
SEC13-217ENST00000482647 DAND5Q8N907 189 aa12.76□□□□□ -0.37
SEC13-217ENST00000482647 IGKV2D-26A0A0A0MRZ7 120 aa12.75□□□□□ -0.37
SEC13-217ENST00000482647 ATOH7Q8N100 152 aa12.75□□□□□ -0.37
SEC13-217ENST00000482647 IGLV1-50A0A075B6I6 118 aa12.74□□□□□ -0.37
SEC13-217ENST00000482647 IGKV2-28A0A075B6P5 120 aa12.74□□□□□ -0.37
SEC13-217ENST00000482647 BCE1O60756 84 aa12.74□□□□□ -0.37
SEC13-217ENST00000482647 IGKV2D-28P01615 120 aa12.74□□□□□ -0.37
SEC13-217ENST00000482647 LOC107984156A0A0G2JMH3 177 aa12.73□□□□□ -0.37
SEC13-217ENST00000482647 C5orf52A6NGY3 159 aa12.73□□□□□ -0.37
SEC13-217ENST00000482647 ZNF815PA8K554 130 aa12.73□□□□□ -0.37
SEC13-217ENST00000482647 M0R378 163 aa12.73□□□□□ -0.37
SEC13-217ENST00000482647 ARL17AQ8IVW1 177 aa12.73□□□□□ -0.37
SEC13-217ENST00000482647 MIEN1Q9BRT3 115 aa12.73□□□□□ -0.37
SEC13-217ENST00000482647 ZNF861PO60384 105 aa12.72□□□□□ -0.37
SEC13-217ENST00000482647 H0Y9J4 135 aa12.71□□□□□ -0.37
SEC13-217ENST00000482647 LINC01600Q96MT4 127 aa12.71□□□□□ -0.37
SEC13-217ENST00000482647 ANKRD39Q53RE8 183 aa12.7□□□□□ -0.38
SEC13-217ENST00000482647 ADAMTSL4-AS1Q5T5F5 129 aa12.7□□□□□ -0.38
SEC13-217ENST00000482647 TIMM17BO60830 172 aa12.69□□□□□ -0.38
SEC13-217ENST00000482647 RPL28P46779 137 aaKnown RBP12.69□□□□□ -0.38
SEC13-217ENST00000482647 TTTY13Q9BZ97 58 aa12.69□□□□□ -0.38
SEC13-217ENST00000482647 NCR3O14931 201 aa12.68□□□□□ -0.38
SEC13-217ENST00000482647 TMEM126AQ9H061 195 aa12.67□□□□□ -0.38
SEC13-217ENST00000482647 HSBP1L1C9JCN9 74 aa12.66□□□□□ -0.38
SEC13-217ENST00000482647 TMEM238C9JI98 176 aa12.66□□□□□ -0.38
SEC13-217ENST00000482647 UBE2AP49459 152 aa12.66□□□□□ -0.38
SEC13-217ENST00000482647 LITAFQ99732 161 aa12.66□□□□□ -0.38
SEC13-217ENST00000482647 NDUFC2O95298 119 aa12.65□□□□□ -0.38
SEC13-217ENST00000482647 MT1HL1P0DM35 61 aa12.65□□□□□ -0.38
SEC13-217ENST00000482647 SCGB1D4Q6XE38 83 aa12.65□□□□□ -0.38
SEC13-217ENST00000482647 TRBV10-2A0A0K0K1G8 114 aa12.64□□□□□ -0.39
SEC13-217ENST00000482647 SCGB1D1O95968 90 aa12.64□□□□□ -0.39
SEC13-217ENST00000482647 NPC2P61916 151 aa12.64□□□□□ -0.39
SEC13-217ENST00000482647 SPANXB1Q9NS25 103 aaPredicted RBP12.64□□□□□ -0.39
SEC13-217ENST00000482647 SOSTDC1Q6X4U4 206 aa12.62□□□□□ -0.39
SEC13-217ENST00000482647 FAM19A1Q7Z5A9 133 aa12.62□□□□□ -0.39
SEC13-217ENST00000482647 PCP2Q8IVA1 136 aa12.62□□□□□ -0.39
SEC13-217ENST00000482647 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
SEC13-217ENST00000482647 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
SEC13-217ENST00000482647 S100A12P80511 92 aa12.61□□□□□ -0.39
SEC13-217ENST00000482647 KRTAP13-1Q8IUC0 172 aa12.61□□□□□ -0.39
SEC13-217ENST00000482647 KCNQ1DNQ9H478 68 aa12.61□□□□□ -0.39
SEC13-217ENST00000482647 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
SEC13-217ENST00000482647 PRYO14603 147 aa12.6□□□□□ -0.39
SEC13-217ENST00000482647 TNXBP22105 4242 aa12.6□□□□□ -0.39
SEC13-217ENST00000482647 KRTAP10-8P60410 259 aa12.59□□□□□ -0.39
SEC13-217ENST00000482647 DDTP30046 118 aa12.58□□□□□ -0.4
SEC13-217ENST00000482647 S100A7L2Q5SY68 101 aa12.58□□□□□ -0.4
SEC13-217ENST00000482647 PRLHP81277 87 aa12.57□□□□□ -0.4
SEC13-217ENST00000482647 SPANXDQ9BXN6 97 aa12.57□□□□□ -0.4
SEC13-217ENST00000482647 SPANXCQ9NY87 97 aa12.57□□□□□ -0.4
SEC13-217ENST00000482647 KRTAP1-4P0C5Y4 121 aa12.56□□□□□ -0.4
SEC13-217ENST00000482647 COPS9Q8WXC6 57 aa12.56□□□□□ -0.4
SEC13-217ENST00000482647 Q6ZVH6 145 aa12.55□□□□□ -0.4
SEC13-217ENST00000482647 IGLV6-57P01721 117 aa12.54□□□□□ -0.4
SEC13-217ENST00000482647 SPRR1AP35321 89 aa12.54□□□□□ -0.4
SEC13-217ENST00000482647 LINC00337Q8N6G1 96 aa12.54□□□□□ -0.4
SEC13-217ENST00000482647 IFITM1P13164 125 aa12.53□□□□□ -0.4
SEC13-217ENST00000482647 PRR26Q8N8Z3 221 aa12.53□□□□□ -0.4
SEC13-217ENST00000482647 ETDCA0A1B0GVM5 59 aa12.52□□□□□ -0.41
SEC13-217ENST00000482647 LINC00518Q8N0U6 118 aa12.51□□□□□ -0.41
SEC13-217ENST00000482647 HIGD2AQ9BW72 106 aa12.5□□□□□ -0.41
SEC13-217ENST00000482647 PPDPFQ9H3Y8 114 aa12.5□□□□□ -0.41
SEC13-217ENST00000482647 CBY1Q9Y3M2 126 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms