RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 OR13C6PQ8NH95 151 aa9.78□□□□□ -0.84
CHD3-211ENST00000481999 ESRGQ1W209 222 aa9.78□□□□□ -0.84
CHD3-211ENST00000481999 DNAH9Q9NYC9 4486 aa9.77□□□□□ -0.85
CHD3-211ENST00000481999 CD164L2Q6UWJ8 174 aa9.77□□□□□ -0.85
CHD3-211ENST00000481999 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
CHD3-211ENST00000481999 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
CHD3-211ENST00000481999 LINC00643Q86TS7 51 aa9.76□□□□□ -0.85
CHD3-211ENST00000481999 IMUPQ9GZP8 106 aa9.76□□□□□ -0.85
CHD3-211ENST00000481999 CXCL5P42830 114 aa9.76□□□□□ -0.85
CHD3-211ENST00000481999 C6orf223Q8N319 242 aa9.75□□□□□ -0.85
CHD3-211ENST00000481999 SDIM1Q6ZPB5 146 aa9.75□□□□□ -0.85
CHD3-211ENST00000481999 PRKDCP78527 4128 aaKnown RBP9.75□□□□□ -0.85
CHD3-211ENST00000481999 DNAH7Q8WXX0 4024 aa9.74□□□□□ -0.85
CHD3-211ENST00000481999 LECT2O14960 151 aa9.74□□□□□ -0.85
CHD3-211ENST00000481999 COX17Q14061 63 aa9.74□□□□□ -0.85
CHD3-211ENST00000481999 KIAA0087Q14695 138 aa9.74□□□□□ -0.85
CHD3-211ENST00000481999 SMCR5Q8TEV8 140 aa9.74□□□□□ -0.85
CHD3-211ENST00000481999 GAGE2AQ6NT46 116 aa9.73□□□□□ -0.85
CHD3-211ENST00000481999 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
CHD3-211ENST00000481999 NDUFC2O95298 119 aa9.72□□□□□ -0.85
CHD3-211ENST00000481999 PRR34Q9NV39 138 aa9.72□□□□□ -0.85
CHD3-211ENST00000481999 C10orf25Q5T742 122 aa9.72□□□□□ -0.85
CHD3-211ENST00000481999 OBSCN-AS1Q96MR7 158 aa9.71□□□□□ -0.85
CHD3-211ENST00000481999 DNAH10Q8IVF4 4471 aa9.7□□□□□ -0.86
CHD3-211ENST00000481999 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
CHD3-211ENST00000481999 B5MCH6 92 aa9.69□□□□□ -0.86
CHD3-211ENST00000481999 CCDC179H3BU77 68 aa9.69□□□□□ -0.86
CHD3-211ENST00000481999 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
CHD3-211ENST00000481999 ORMDL1Q9P0S3 153 aa9.69□□□□□ -0.86
CHD3-211ENST00000481999 A0A1B0GX51 115 aa9.68□□□□□ -0.86
CHD3-211ENST00000481999 H3BNG1 76 aa9.68□□□□□ -0.86
CHD3-211ENST00000481999 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
CHD3-211ENST00000481999 UNQ6190/PRO20217Q6UXQ8 127 aa9.68□□□□□ -0.86
CHD3-211ENST00000481999 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
CHD3-211ENST00000481999 C9orf129Q5T035 196 aaKnown RBP9.67□□□□□ -0.86
CHD3-211ENST00000481999 FAM236AA0A1B0GUQ0 79 aa9.67□□□□□ -0.86
CHD3-211ENST00000481999 FAM236BA0A1B0GV22 79 aa9.67□□□□□ -0.86
CHD3-211ENST00000481999 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
CHD3-211ENST00000481999 HIGD2BQ4VC39 106 aa9.66□□□□□ -0.86
CHD3-211ENST00000481999 LINC00167Q96N53 147 aa9.66□□□□□ -0.86
CHD3-211ENST00000481999 FBN3Q75N90 2809 aa9.66□□□□□ -0.86
CHD3-211ENST00000481999 SLPIP03973 132 aa9.66□□□□□ -0.86
CHD3-211ENST00000481999 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
CHD3-211ENST00000481999 Q8NDZ9 215 aa9.65□□□□□ -0.86
CHD3-211ENST00000481999 MUC7Q8TAX7 377 aa9.65□□□□□ -0.86
CHD3-211ENST00000481999 DNAH1Q9P2D7 4330 aa9.65□□□□□ -0.86
CHD3-211ENST00000481999 NCR3O14931 201 aa9.64□□□□□ -0.87
CHD3-211ENST00000481999 Q8N814 137 aa9.64□□□□□ -0.87
CHD3-211ENST00000481999 LINC00588Q9Y4M8 146 aa9.64□□□□□ -0.87
CHD3-211ENST00000481999 KRTAP26-1Q6PEX3 210 aa9.63□□□□□ -0.87
CHD3-211ENST00000481999 TRAV10A0A0B4J240 114 aa9.62□□□□□ -0.87
CHD3-211ENST00000481999 SS18L2Q9UHA2 77 aa9.62□□□□□ -0.87
CHD3-211ENST00000481999 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
CHD3-211ENST00000481999 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
CHD3-211ENST00000481999 TMEM256-PLSCR3K7ERE1 68 aa9.61□□□□□ -0.87
CHD3-211ENST00000481999 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
CHD3-211ENST00000481999 PLECQ15149 4684 aaKnown RBP9.61□□□□□ -0.87
CHD3-211ENST00000481999 LINC00846Q9NV44 126 aa9.6□□□□□ -0.87
CHD3-211ENST00000481999 C6orf99Q4VX62 202 aa9.59□□□□□ -0.87
CHD3-211ENST00000481999 LINC01556Q5JQF7 62 aa9.59□□□□□ -0.87
CHD3-211ENST00000481999 CASC10Q5T4H9 136 aa9.59□□□□□ -0.87
CHD3-211ENST00000481999 Q6JHZ5 121 aa9.59□□□□□ -0.87
CHD3-211ENST00000481999 STARD9Q9P2P6 4700 aa9.58□□□□□ -0.88
CHD3-211ENST00000481999 C15orf56Q8N910 161 aa9.58□□□□□ -0.88
CHD3-211ENST00000481999 C6orf48Q9UBA6 75 aa9.58□□□□□ -0.88
CHD3-211ENST00000481999 CCKP06307 115 aa9.58□□□□□ -0.88
CHD3-211ENST00000481999 XAGE1AQ9HD64 81 aa9.58□□□□□ -0.88
CHD3-211ENST00000481999 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
CHD3-211ENST00000481999 C1orf43Q9BWL3 253 aa9.57□□□□□ -0.88
CHD3-211ENST00000481999 LINC00575Q6W349 94 aa9.56□□□□□ -0.88
CHD3-211ENST00000481999 IGLV6-57P01721 117 aa9.55□□□□□ -0.88
CHD3-211ENST00000481999 DNAH10OSP0CZ25 163 aa9.55□□□□□ -0.88
CHD3-211ENST00000481999 ZNF561-AS1K7EIQ3 104 aa9.54□□□□□ -0.88
CHD3-211ENST00000481999 HIST1H4AP62805 103 aaKnown RBP9.54□□□□□ -0.88
CHD3-211ENST00000481999 Q6ZRU5 148 aa9.54□□□□□ -0.88
CHD3-211ENST00000481999 TGP01266 2768 aa9.54□□□□□ -0.88
CHD3-211ENST00000481999 IGKV3D-7A0A0C4DH55 119 aa9.53□□□□□ -0.88
CHD3-211ENST00000481999 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
CHD3-211ENST00000481999 CAMK2N2Q96S95 79 aa9.53□□□□□ -0.88
CHD3-211ENST00000481999 hADV29S1A0JD25 119 aa9.53□□□□□ -0.88
CHD3-211ENST00000481999 UQCRQO14949 82 aa9.53□□□□□ -0.88
CHD3-211ENST00000481999 C3orf22Q8N5N4 141 aa9.53□□□□□ -0.88
CHD3-211ENST00000481999 ATOX1O00244 68 aa9.52□□□□□ -0.88
CHD3-211ENST00000481999 KRTAP1-5Q9BYS1 174 aa9.52□□□□□ -0.89
CHD3-211ENST00000481999 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
CHD3-211ENST00000481999 C9orf153Q5TBE3 101 aa9.5□□□□□ -0.89
CHD3-211ENST00000481999 COX7CP15954 63 aa9.49□□□□□ -0.89
CHD3-211ENST00000481999 ATP5EP2Q5VTU8 51 aa9.49□□□□□ -0.89
CHD3-211ENST00000481999 DYNC2H1Q8NCM8 4307 aaKnown RBP9.49□□□□□ -0.89
CHD3-211ENST00000481999 H3BQ85 93 aa9.48□□□□□ -0.89
CHD3-211ENST00000481999 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
CHD3-211ENST00000481999 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
CHD3-211ENST00000481999 RBM3P98179 157 aaKnown RBP9.48□□□□□ -0.89
CHD3-211ENST00000481999 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
CHD3-211ENST00000481999 DIRC1Q969H9 104 aa9.47□□□□□ -0.89
CHD3-211ENST00000481999 Q6ZRP5 223 aa9.46□□□□□ -0.89
CHD3-211ENST00000481999 LAMTOR3Q9UHA4 124 aa9.46□□□□□ -0.89
CHD3-211ENST00000481999 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.9
CHD3-211ENST00000481999 C2orf48Q96LS8 159 aa9.46□□□□□ -0.9
CHD3-211ENST00000481999 UBL5Q9BZL1 73 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms