RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PMCHL1Q16048 86 aa6.85□□□□□ -1.31
CCM2-213ENST00000480658 FAM229BQ4G0N7 80 aa6.85□□□□□ -1.31
CCM2-213ENST00000480658 GAGE10A6NGK3 116 aa6.84□□□□□ -1.31
CCM2-213ENST00000480658 S100A1P23297 94 aa6.84□□□□□ -1.31
CCM2-213ENST00000480658 ZNF625Q96I27 306 aaPredicted RBP6.84□□□□□ -1.31
CCM2-213ENST00000480658 MAP1LC3CQ9BXW4 147 aa6.84□□□□□ -1.31
CCM2-213ENST00000480658 IGKV2-28A0A075B6P5 120 aa6.83□□□□□ -1.32
CCM2-213ENST00000480658 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
CCM2-213ENST00000480658 IGKV2D-28P01615 120 aa6.83□□□□□ -1.32
CCM2-213ENST00000480658 VPREB1P12018 145 aa6.83□□□□□ -1.32
CCM2-213ENST00000480658 IGKV2D-26A0A0A0MRZ7 120 aa6.82□□□□□ -1.32
CCM2-213ENST00000480658 PLNP26678 52 aa6.82□□□□□ -1.32
CCM2-213ENST00000480658 LINC00158P58513 81 aa6.82□□□□□ -1.32
CCM2-213ENST00000480658 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
CCM2-213ENST00000480658 TYMSOSQ8TAI1 123 aa6.82□□□□□ -1.32
CCM2-213ENST00000480658 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
CCM2-213ENST00000480658 MEIG1Q5JSS6 88 aa6.81□□□□□ -1.32
CCM2-213ENST00000480658 HSPB8Q9UJY1 196 aa6.81□□□□□ -1.32
CCM2-213ENST00000480658 ZNF706Q9Y5V0 76 aaPredicted RBP6.81□□□□□ -1.32
CCM2-213ENST00000480658 MYMXA0A1B0GTQ4 84 aa6.8□□□□□ -1.32
CCM2-213ENST00000480658 COLCA2A8K830 154 aa6.8□□□□□ -1.32
CCM2-213ENST00000480658 M0R378 163 aa6.8□□□□□ -1.32
CCM2-213ENST00000480658 LEPROTL1O95214 131 aa6.8□□□□□ -1.32
CCM2-213ENST00000480658 HERVK_113P61574 105 aa6.8□□□□□ -1.32
CCM2-213ENST00000480658 FAM19A1Q7Z5A9 133 aa6.8□□□□□ -1.32
CCM2-213ENST00000480658 PRYO14603 147 aa6.78□□□□□ -1.32
CCM2-213ENST00000480658 NMUP48645 174 aa6.78□□□□□ -1.32
CCM2-213ENST00000480658 PRR4Q16378 134 aa6.78□□□□□ -1.32
CCM2-213ENST00000480658 PLEKHB2Q96CS7 222 aa6.78□□□□□ -1.32
CCM2-213ENST00000480658 A0A087X002 238 aa6.77□□□□□ -1.33
CCM2-213ENST00000480658 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
CCM2-213ENST00000480658 NDUFA12Q9UI09 145 aa6.77□□□□□ -1.33
CCM2-213ENST00000480658 TRGC2P03986 189 aa6.76□□□□□ -1.33
CCM2-213ENST00000480658 PRLHP81277 87 aa6.76□□□□□ -1.33
CCM2-213ENST00000480658 BOD1L2Q8IYS8 172 aa6.76□□□□□ -1.33
CCM2-213ENST00000480658 TMA7Q9Y2S6 64 aaKnown RBP6.76□□□□□ -1.33
CCM2-213ENST00000480658 CBY1Q9Y3M2 126 aa6.76□□□□□ -1.33
CCM2-213ENST00000480658 LRP2P98164 4655 aa6.75□□□□□ -1.33
CCM2-213ENST00000480658 TMEM238C9JI98 176 aa6.75□□□□□ -1.33
CCM2-213ENST00000480658 H0Y8G0 127 aa6.75□□□□□ -1.33
CCM2-213ENST00000480658 FAM19A2Q8N3H0 131 aa6.75□□□□□ -1.33
CCM2-213ENST00000480658 MIR7-3HGQ8N6C7 128 aa6.75□□□□□ -1.33
CCM2-213ENST00000480658 LINC00337Q8N6G1 96 aa6.75□□□□□ -1.33
CCM2-213ENST00000480658 LINC00304Q8N9R0 145 aa6.75□□□□□ -1.33
CCM2-213ENST00000480658 LEPROTO15243 131 aa6.74□□□□□ -1.33
CCM2-213ENST00000480658 SERF1AO75920 110 aa6.74□□□□□ -1.33
CCM2-213ENST00000480658 DPM2O94777 84 aa6.74□□□□□ -1.33
CCM2-213ENST00000480658 GHRHP01286 108 aa6.74□□□□□ -1.33
CCM2-213ENST00000480658 SMIM13P0DJ93 91 aa6.74□□□□□ -1.33
CCM2-213ENST00000480658 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
CCM2-213ENST00000480658 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
CCM2-213ENST00000480658 TRBV10-2A0A0K0K1G8 114 aa6.73□□□□□ -1.33
CCM2-213ENST00000480658 A0A0U1RQV1 116 aa6.73□□□□□ -1.33
CCM2-213ENST00000480658 LGALS3P17931 250 aaKnown RBP6.73□□□□□ -1.33
CCM2-213ENST00000480658 KCNQ1DNQ9H478 68 aa6.73□□□□□ -1.33
CCM2-213ENST00000480658 LOC107984156A0A0G2JMH3 177 aa6.72□□□□□ -1.33
CCM2-213ENST00000480658 A0A0U1RRA0 63 aa6.72□□□□□ -1.33
CCM2-213ENST00000480658 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
CCM2-213ENST00000480658 J3QQQ9 107 aa6.72□□□□□ -1.33
CCM2-213ENST00000480658 IGKCP01834 107 aa6.72□□□□□ -1.33
CCM2-213ENST00000480658 ARL17AQ8IVW1 177 aa6.72□□□□□ -1.33
CCM2-213ENST00000480658 TSPAN13O95857 204 aa6.71□□□□□ -1.34
CCM2-213ENST00000480658 SPANXB1Q9NS25 103 aaPredicted RBP6.71□□□□□ -1.34
CCM2-213ENST00000480658 NDUFC2O95298 119 aa6.7□□□□□ -1.34
CCM2-213ENST00000480658 SPRR1AP35321 89 aa6.7□□□□□ -1.34
CCM2-213ENST00000480658 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
CCM2-213ENST00000480658 NCR3O14931 201 aa6.69□□□□□ -1.34
CCM2-213ENST00000480658 JOSD1Q15040 202 aaPredicted RBP6.69□□□□□ -1.34
CCM2-213ENST00000480658 Q8NDZ9 215 aa6.69□□□□□ -1.34
CCM2-213ENST00000480658 SPRR4Q96PI1 79 aa6.69□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BKO60814 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BJP06899 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 FABP4P15090 132 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BOP23527 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 DDTP30046 118 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BBP33778 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BDP58876 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 LINC00310P59036 64 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BCP62807 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST2H2BEQ16778 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.68□□□□□ -1.34
CCM2-213ENST00000480658 S100A7L2Q5SY68 101 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BHQ93079 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BNQ99877 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 HIST1H2BMQ99879 126 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 ANAPC11Q9NYG5 84 aa6.68□□□□□ -1.34
CCM2-213ENST00000480658 TRBV10-3A0A0K0K1G6 114 aa6.67□□□□□ -1.34
CCM2-213ENST00000480658 HINT1P49773 126 aaPredicted RBP6.67□□□□□ -1.34
CCM2-213ENST00000480658 AKR1D1P51857 326 aa6.67□□□□□ -1.34
CCM2-213ENST00000480658 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
CCM2-213ENST00000480658 E9PLD3 99 aa6.66□□□□□ -1.34
CCM2-213ENST00000480658 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
CCM2-213ENST00000480658 C5orf52A6NGY3 159 aa6.65□□□□□ -1.34
CCM2-213ENST00000480658 KRTAP4-16G5E9R7 235 aaPredicted RBP6.65□□□□□ -1.34
CCM2-213ENST00000480658 SPINK1P00995 79 aa6.65□□□□□ -1.34
CCM2-213ENST00000480658 TSPEAR-AS2P59090 65 aa6.65□□□□□ -1.34
CCM2-213ENST00000480658 LINC00483Q53H64 154 aa6.65□□□□□ -1.34
CCM2-213ENST00000480658 Q6ZRX8 168 aa6.65□□□□□ -1.34
CCM2-213ENST00000480658 COPS9Q8WXC6 57 aa6.65□□□□□ -1.34
CCM2-213ENST00000480658 RNF213Q63HN8 5207 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms