RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 KRTAP7-1Q8IUC3 87 aa9.6□□□□□ -0.87
C9orf3-217ENST00000479161 MAP1LC3CQ9BXW4 147 aa9.6□□□□□ -0.87
C9orf3-217ENST00000479161 TP73-AS1Q9UF72 201 aa9.6□□□□□ -0.87
C9orf3-217ENST00000479161 A0A1B0GV90 55 aa9.59□□□□□ -0.87
C9orf3-217ENST00000479161 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
C9orf3-217ENST00000479161 SYS1-DBNDD2H3BUS1 97 aa9.58□□□□□ -0.88
C9orf3-217ENST00000479161 HNRNPA3P51991 378 aaKnown RBP9.58□□□□□ -0.88
C9orf3-217ENST00000479161 DPM2O94777 84 aa9.57□□□□□ -0.88
C9orf3-217ENST00000479161 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
C9orf3-217ENST00000479161 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
C9orf3-217ENST00000479161 ERG28Q9UKR5 140 aa9.57□□□□□ -0.88
C9orf3-217ENST00000479161 IGLV5-37A0A075B6J1 123 aa9.56□□□□□ -0.88
C9orf3-217ENST00000479161 M0QXV9 152 aa9.56□□□□□ -0.88
C9orf3-217ENST00000479161 HERV-K104P63124 156 aa9.56□□□□□ -0.88
C9orf3-217ENST00000479161 SPINK6Q6UWN8 80 aa9.56□□□□□ -0.88
C9orf3-217ENST00000479161 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
C9orf3-217ENST00000479161 XAGE1AQ9HD64 81 aa9.56□□□□□ -0.88
C9orf3-217ENST00000479161 PSORS1C2Q9UIG4 136 aa9.56□□□□□ -0.88
C9orf3-217ENST00000479161 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
C9orf3-217ENST00000479161 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
C9orf3-217ENST00000479161 IGKCP01834 107 aa9.55□□□□□ -0.88
C9orf3-217ENST00000479161 LINC01545Q5VT33 79 aa9.55□□□□□ -0.88
C9orf3-217ENST00000479161 HSBP1L1C9JCN9 74 aa9.54□□□□□ -0.88
C9orf3-217ENST00000479161 H0Y8G0 127 aa9.54□□□□□ -0.88
C9orf3-217ENST00000479161 COL5A1-AS1Q5SY13 56 aa9.54□□□□□ -0.88
C9orf3-217ENST00000479161 PLEKHB2Q96CS7 222 aa9.54□□□□□ -0.88
C9orf3-217ENST00000479161 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
C9orf3-217ENST00000479161 LEPROTO15243 131 aa9.53□□□□□ -0.88
C9orf3-217ENST00000479161 HERVK_113P61574 105 aa9.53□□□□□ -0.88
C9orf3-217ENST00000479161 SERTAD4-AS1Q5TG53 156 aa9.53□□□□□ -0.88
C9orf3-217ENST00000479161 PFN2P35080 140 aa9.52□□□□□ -0.89
C9orf3-217ENST00000479161 PMCHL2Q9BQD1 86 aa9.52□□□□□ -0.89
C9orf3-217ENST00000479161 MYMXA0A1B0GTQ4 84 aa9.51□□□□□ -0.89
C9orf3-217ENST00000479161 NMUP48645 174 aa9.51□□□□□ -0.89
C9orf3-217ENST00000479161 MRPL55Q7Z7F7 128 aaKnown RBP9.51□□□□□ -0.89
C9orf3-217ENST00000479161 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
C9orf3-217ENST00000479161 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
C9orf3-217ENST00000479161 J3QL48 77 aa9.49□□□□□ -0.89
C9orf3-217ENST00000479161 IGLV7-43P04211 117 aa9.49□□□□□ -0.89
C9orf3-217ENST00000479161 UBE2BP63146 152 aa9.49□□□□□ -0.89
C9orf3-217ENST00000479161 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
C9orf3-217ENST00000479161 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
C9orf3-217ENST00000479161 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
C9orf3-217ENST00000479161 ATOH7Q8N100 152 aa9.49□□□□□ -0.89
C9orf3-217ENST00000479161 E9PLD3 99 aa9.48□□□□□ -0.89
C9orf3-217ENST00000479161 J3QQQ9 107 aa9.48□□□□□ -0.89
C9orf3-217ENST00000479161 LINC00158P58513 81 aa9.47□□□□□ -0.89
C9orf3-217ENST00000479161 SLC25A34Q6PIV7 304 aa9.47□□□□□ -0.89
C9orf3-217ENST00000479161 REG3GQ6UW15 175 aa9.47□□□□□ -0.89
C9orf3-217ENST00000479161 LOC107984156A0A0G2JMH3 177 aa9.46□□□□□ -0.9
C9orf3-217ENST00000479161 VPREB1P12018 145 aa9.46□□□□□ -0.9
C9orf3-217ENST00000479161 ARL17AQ8IVW1 177 aa9.46□□□□□ -0.9
C9orf3-217ENST00000479161 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.9
C9orf3-217ENST00000479161 LINC01600Q96MT4 127 aa9.46□□□□□ -0.9
C9orf3-217ENST00000479161 LINC00167Q96N53 147 aa9.46□□□□□ -0.9
C9orf3-217ENST00000479161 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
C9orf3-217ENST00000479161 DIRC1Q969H9 104 aa9.45□□□□□ -0.9
C9orf3-217ENST00000479161 DLEU1O43261 78 aa9.44□□□□□ -0.9
C9orf3-217ENST00000479161 SMIM13P0DJ93 91 aa9.44□□□□□ -0.9
C9orf3-217ENST00000479161 COX8AP10176 69 aa9.44□□□□□ -0.9
C9orf3-217ENST00000479161 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
C9orf3-217ENST00000479161 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
C9orf3-217ENST00000479161 BATFQ16520 125 aa9.43□□□□□ -0.9
C9orf3-217ENST00000479161 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
C9orf3-217ENST00000479161 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
C9orf3-217ENST00000479161 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
C9orf3-217ENST00000479161 ZNF861PO60384 105 aa9.41□□□□□ -0.9
C9orf3-217ENST00000479161 BCE1O60756 84 aa9.41□□□□□ -0.9
C9orf3-217ENST00000479161 MT1HL1P0DM35 61 aa9.41□□□□□ -0.9
C9orf3-217ENST00000479161 H0Y9J4 135 aa9.4□□□□□ -0.9
C9orf3-217ENST00000479161 TNXBP22105 4242 aa9.4□□□□□ -0.91
C9orf3-217ENST00000479161 M0R378 163 aa9.39□□□□□ -0.91
C9orf3-217ENST00000479161 HINT1P49773 126 aaPredicted RBP9.39□□□□□ -0.91
C9orf3-217ENST00000479161 A0A0U1RRA0 63 aa9.38□□□□□ -0.91
C9orf3-217ENST00000479161 RPL37AP8A6NKH3 93 aa9.38□□□□□ -0.91
C9orf3-217ENST00000479161 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
C9orf3-217ENST00000479161 Q8NDZ9 215 aa9.38□□□□□ -0.91
C9orf3-217ENST00000479161 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
C9orf3-217ENST00000479161 TIMM17BO60830 172 aa9.37□□□□□ -0.91
C9orf3-217ENST00000479161 KRTAP10-8P60410 259 aa9.37□□□□□ -0.91
C9orf3-217ENST00000479161 BVES-AS1Q5T3Y7 98 aa9.37□□□□□ -0.91
C9orf3-217ENST00000479161 BOD1L2Q8IYS8 172 aa9.37□□□□□ -0.91
C9orf3-217ENST00000479161 TRBV10-2A0A0K0K1G8 114 aa9.36□□□□□ -0.91
C9orf3-217ENST00000479161 GAGE10A6NGK3 116 aa9.36□□□□□ -0.91
C9orf3-217ENST00000479161 NDUFC2O95298 119 aa9.36□□□□□ -0.91
C9orf3-217ENST00000479161 ANKRD39Q53RE8 183 aa9.36□□□□□ -0.91
C9orf3-217ENST00000479161 KRTAP13-1Q8IUC0 172 aa9.36□□□□□ -0.91
C9orf3-217ENST00000479161 C2orf91Q6ZV80 131 aa9.35□□□□□ -0.91
C9orf3-217ENST00000479161 IGKV2-28A0A075B6P5 120 aa9.33□□□□□ -0.92
C9orf3-217ENST00000479161 IGKV2D-28P01615 120 aa9.33□□□□□ -0.92
C9orf3-217ENST00000479161 HSD52Q0P140 79 aa9.33□□□□□ -0.92
C9orf3-217ENST00000479161 TMEM126AQ9H061 195 aa9.33□□□□□ -0.92
C9orf3-217ENST00000479161 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
C9orf3-217ENST00000479161 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
C9orf3-217ENST00000479161 LITAFQ99732 161 aa9.32□□□□□ -0.92
C9orf3-217ENST00000479161 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
C9orf3-217ENST00000479161 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
C9orf3-217ENST00000479161 ADAMTSL4-AS1Q5T5F5 129 aa9.31□□□□□ -0.92
C9orf3-217ENST00000479161 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
C9orf3-217ENST00000479161 SPANXB1Q9NS25 103 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms