RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 MRPL55Q7Z7F7 128 aaKnown RBP12.66□□□□□ -0.38
VARS-224ENST00000479051 J3QL48 77 aa12.65□□□□□ -0.38
VARS-224ENST00000479051 OXTP01178 125 aa12.65□□□□□ -0.38
VARS-224ENST00000479051 S100A6P06703 90 aa12.65□□□□□ -0.38
VARS-224ENST00000479051 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.38
VARS-224ENST00000479051 KRTAP29-1A8MX34 341 aaPredicted RBP12.64□□□□□ -0.39
VARS-224ENST00000479051 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
VARS-224ENST00000479051 RPL24P83731 157 aaKnown RBP12.64□□□□□ -0.39
VARS-224ENST00000479051 IGLV5-37A0A075B6J1 123 aa12.63□□□□□ -0.39
VARS-224ENST00000479051 A0A0U1RRA0 63 aa12.63□□□□□ -0.39
VARS-224ENST00000479051 E9PLD3 99 aa12.63□□□□□ -0.39
VARS-224ENST00000479051 SMIM13P0DJ93 91 aa12.63□□□□□ -0.39
VARS-224ENST00000479051 S100A2P29034 98 aa12.63□□□□□ -0.39
VARS-224ENST00000479051 PKHD1L1Q86WI1 4243 aa12.61□□□□□ -0.39
VARS-224ENST00000479051 AKR1D1P51857 326 aa12.61□□□□□ -0.39
VARS-224ENST00000479051 KRTAP11-1Q8IUC1 163 aa12.6□□□□□ -0.39
VARS-224ENST00000479051 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
VARS-224ENST00000479051 IGLV7-43P04211 117 aa12.59□□□□□ -0.39
VARS-224ENST00000479051 SRSF9Q13242 221 aaKnown RBP eCLIP12.59□□□□□ -0.39
VARS-224ENST00000479051 LINC00167Q96N53 147 aa12.59□□□□□ -0.39
VARS-224ENST00000479051 GAGE10A6NGK3 116 aa12.58□□□□□ -0.4
VARS-224ENST00000479051 VPREB1P12018 145 aa12.58□□□□□ -0.4
VARS-224ENST00000479051 REG3GQ6UW15 175 aa12.58□□□□□ -0.4
VARS-224ENST00000479051 HIST3H2BBQ8N257 126 aa12.58□□□□□ -0.4
VARS-224ENST00000479051 MIR7-3HGQ8N6C7 128 aa12.58□□□□□ -0.4
VARS-224ENST00000479051 RPL37AP8A6NKH3 93 aa12.56□□□□□ -0.4
VARS-224ENST00000479051 DMBT1Q9UGM3 2413 aaPredicted RBP12.55□□□□□ -0.4
VARS-224ENST00000479051 DIRC1Q969H9 104 aa12.54□□□□□ -0.4
VARS-224ENST00000479051 HIST1H2BLQ99880 126 aa12.54□□□□□ -0.4
VARS-224ENST00000479051 BOD1L2Q8IYS8 172 aa12.53□□□□□ -0.4
VARS-224ENST00000479051 MIEN1Q9BRT3 115 aa12.52□□□□□ -0.41
VARS-224ENST00000479051 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
VARS-224ENST00000479051 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
VARS-224ENST00000479051 M0R378 163 aa12.5□□□□□ -0.41
VARS-224ENST00000479051 BCE1O60756 84 aa12.5□□□□□ -0.41
VARS-224ENST00000479051 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
VARS-224ENST00000479051 SNRPEP62304 92 aaKnown RBP12.5□□□□□ -0.41
VARS-224ENST00000479051 ZNF815PA8K554 130 aa12.49□□□□□ -0.41
VARS-224ENST00000479051 DAND5Q8N907 189 aa12.49□□□□□ -0.41
VARS-224ENST00000479051 Q8NDZ9 215 aa12.49□□□□□ -0.41
VARS-224ENST00000479051 IGLV1-50A0A075B6I6 118 aa12.48□□□□□ -0.41
VARS-224ENST00000479051 IGKV2D-26A0A0A0MRZ7 120 aa12.48□□□□□ -0.41
VARS-224ENST00000479051 ZNF861PO60384 105 aa12.48□□□□□ -0.41
VARS-224ENST00000479051 ATOH7Q8N100 152 aa12.48□□□□□ -0.41
VARS-224ENST00000479051 H0Y9J4 135 aa12.47□□□□□ -0.41
VARS-224ENST00000479051 RPL28P46779 137 aaKnown RBP12.47□□□□□ -0.41
VARS-224ENST00000479051 LOC107984156A0A0G2JMH3 177 aa12.46□□□□□ -0.41
VARS-224ENST00000479051 ARL17AQ8IVW1 177 aa12.46□□□□□ -0.41
VARS-224ENST00000479051 LINC01600Q96MT4 127 aa12.46□□□□□ -0.41
VARS-224ENST00000479051 NCR3O14931 201 aa12.45□□□□□ -0.42
VARS-224ENST00000479051 TIMM17BO60830 172 aa12.45□□□□□ -0.42
VARS-224ENST00000479051 FAT3Q8TDW7 4589 aa12.45□□□□□ -0.42
VARS-224ENST00000479051 LRP1Q07954 4544 aaKnown RBP12.44□□□□□ -0.42
VARS-224ENST00000479051 C5orf52A6NGY3 159 aa12.44□□□□□ -0.42
VARS-224ENST00000479051 UBE2AP49459 152 aa12.44□□□□□ -0.42
VARS-224ENST00000479051 HSBP1L1C9JCN9 74 aa12.43□□□□□ -0.42
VARS-224ENST00000479051 S100A12P80511 92 aa12.43□□□□□ -0.42
VARS-224ENST00000479051 ANKRD39Q53RE8 183 aa12.43□□□□□ -0.42
VARS-224ENST00000479051 SCGB1D4Q6XE38 83 aa12.42□□□□□ -0.42
VARS-224ENST00000479051 TTTY13Q9BZ97 58 aa12.42□□□□□ -0.42
VARS-224ENST00000479051 TMEM126AQ9H061 195 aa12.42□□□□□ -0.42
VARS-224ENST00000479051 TRBV10-2A0A0K0K1G8 114 aa12.41□□□□□ -0.42
VARS-224ENST00000479051 NDUFC2O95298 119 aa12.41□□□□□ -0.42
VARS-224ENST00000479051 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
VARS-224ENST00000479051 SPANXB1Q9NS25 103 aaPredicted RBP12.41□□□□□ -0.42
VARS-224ENST00000479051 TMEM238C9JI98 176 aa12.4□□□□□ -0.42
VARS-224ENST00000479051 FAM19A1Q7Z5A9 133 aa12.4□□□□□ -0.42
VARS-224ENST00000479051 PRYO14603 147 aa12.39□□□□□ -0.43
VARS-224ENST00000479051 MT1HL1P0DM35 61 aa12.39□□□□□ -0.43
VARS-224ENST00000479051 NPC2P61916 151 aa12.39□□□□□ -0.43
VARS-224ENST00000479051 SCGB1D1O95968 90 aa12.38□□□□□ -0.43
VARS-224ENST00000479051 LITAFQ99732 161 aa12.38□□□□□ -0.43
VARS-224ENST00000479051 TRBV10-3A0A0K0K1G6 114 aa12.36□□□□□ -0.43
VARS-224ENST00000479051 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
VARS-224ENST00000479051 SOSTDC1Q6X4U4 206 aa12.36□□□□□ -0.43
VARS-224ENST00000479051 LINC00308Q8TCZ7 52 aa12.36□□□□□ -0.43
VARS-224ENST00000479051 COPS9Q8WXC6 57 aa12.36□□□□□ -0.43
VARS-224ENST00000479051 DDTP30046 118 aa12.35□□□□□ -0.43
VARS-224ENST00000479051 KRTAP13-1Q8IUC0 172 aa12.35□□□□□ -0.43
VARS-224ENST00000479051 PCP2Q8IVA1 136 aa12.35□□□□□ -0.43
VARS-224ENST00000479051 KCNQ1DNQ9H478 68 aa12.35□□□□□ -0.43
VARS-224ENST00000479051 PRLHP81277 87 aa12.34□□□□□ -0.43
VARS-224ENST00000479051 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
VARS-224ENST00000479051 SPANXDQ9BXN6 97 aa12.33□□□□□ -0.44
VARS-224ENST00000479051 KRTAP10-8P60410 259 aa12.32□□□□□ -0.44
VARS-224ENST00000479051 ETDCA0A1B0GVM5 59 aa12.31□□□□□ -0.44
VARS-224ENST00000479051 EIF4EBP3O60516 100 aaPredicted RBP12.31□□□□□ -0.44
VARS-224ENST00000479051 Q6ZVH6 145 aa12.31□□□□□ -0.44
VARS-224ENST00000479051 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
VARS-224ENST00000479051 CBY1Q9Y3M2 126 aa12.31□□□□□ -0.44
VARS-224ENST00000479051 HERC1Q15751 4861 aa12.3□□□□□ -0.44
VARS-224ENST00000479051 KRTAP1-4P0C5Y4 121 aa12.3□□□□□ -0.44
VARS-224ENST00000479051 IFITM1P13164 125 aa12.29□□□□□ -0.44
VARS-224ENST00000479051 SPRR1AP35321 89 aa12.29□□□□□ -0.44
VARS-224ENST00000479051 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
VARS-224ENST00000479051 PRR26Q8N8Z3 221 aa12.29□□□□□ -0.44
VARS-224ENST00000479051 IGLV6-57P01721 117 aa12.28□□□□□ -0.44
VARS-224ENST00000479051 LINC00518Q8N0U6 118 aa12.28□□□□□ -0.44
VARS-224ENST00000479051 HIGD2AQ9BW72 106 aa12.28□□□□□ -0.44
VARS-224ENST00000479051 OR13C6PQ8NH95 151 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms