RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 RETNLBQ9BQ08 111 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 UPK3BQ9BT76 320 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 PRO1854Q9UHT4 67 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 SLC25A20O43772 301 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 CLPSL2Q6UWE3 100 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 TRGV4A0A0C4DH28 118 aa4.27□□□□□ -1.73
SH3D19-207ENST00000478503 J3QKU1 62 aa4.27□□□□□ -1.73
SH3D19-207ENST00000478503 CXCL6P80162 114 aa4.27□□□□□ -1.73
SH3D19-207ENST00000478503 FP248Q71RG6 208 aaPredicted RBP4.27□□□□□ -1.73
SH3D19-207ENST00000478503 PSPHP1O15172 72 aa4.27□□□□□ -1.73
SH3D19-207ENST00000478503 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
SH3D19-207ENST00000478503 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
SH3D19-207ENST00000478503 UBE2WQ96B02 151 aa4.27□□□□□ -1.73
SH3D19-207ENST00000478503 PRO0461Q9UI25 63 aa4.27□□□□□ -1.73
SH3D19-207ENST00000478503 IGLV5-45A0A087WSX0 123 aa4.26□□□□□ -1.73
SH3D19-207ENST00000478503 KRTAP10-3P60369 221 aa4.26□□□□□ -1.73
SH3D19-207ENST00000478503 CCKP06307 115 aa4.26□□□□□ -1.73
SH3D19-207ENST00000478503 MRPS36P82909 103 aaKnown RBP4.26□□□□□ -1.73
SH3D19-207ENST00000478503 FHL2Q14192 279 aa4.26□□□□□ -1.73
SH3D19-207ENST00000478503 C5orf38Q86SI9 138 aa4.26□□□□□ -1.73
SH3D19-207ENST00000478503 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
SH3D19-207ENST00000478503 IGHV3-33P01772 117 aa4.25□□□□□ -1.73
SH3D19-207ENST00000478503 TMEM263Q8WUH6 116 aaKnown RBP4.25□□□□□ -1.73
SH3D19-207ENST00000478503 C16orf95Q9H693 158 aa4.25□□□□□ -1.73
SH3D19-207ENST00000478503 A8MTW9 85 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 LY6G6DO95868 133 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 HTN3P15516 51 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 HIST1H4AP62805 103 aaKnown RBP4.24□□□□□ -1.73
SH3D19-207ENST00000478503 PRR3P79522 188 aaKnown RBP4.24□□□□□ -1.73
SH3D19-207ENST00000478503 LITAFQ99732 161 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 IGLV4-60A0A075B6I1 120 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 UBE2D3P61077 147 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 UBE2D2P62837 147 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 TENM3Q9P273 2699 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 IGLV1-51P01701 117 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 RNASE1P07998 156 aaKnown RBP4.24□□□□□ -1.73
SH3D19-207ENST00000478503 Q8N3U1 123 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 DEFB135Q30KP9 77 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 LINC00588Q9Y4M8 146 aa4.24□□□□□ -1.73
SH3D19-207ENST00000478503 MGAM2Q2M2H8 2515 aa4.23□□□□□ -1.73
SH3D19-207ENST00000478503 SBSPONQ8IVN8 264 aa4.23□□□□□ -1.73
SH3D19-207ENST00000478503 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
SH3D19-207ENST00000478503 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
SH3D19-207ENST00000478503 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
SH3D19-207ENST00000478503 CMC4P56277 68 aaPredicted RBP4.23□□□□□ -1.73
SH3D19-207ENST00000478503 IGLV10-54A0A075B6I4 117 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 IGHV3OR16-9A0A0B4J2B5 98 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 TEX49A0A1B0GTD5 131 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 C2orf82Q6UX34 121 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 CDC42SE2Q9NRR3 84 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 XCL1P47992 114 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 SMIM1B2RUZ4 78 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 MIAQ16674 131 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 LINC00269Q8N2A0 174 aa4.22□□□□□ -1.73
SH3D19-207ENST00000478503 CSNK1G2-AS1Q8NCQ2 148 aa4.21□□□□□ -1.73
SH3D19-207ENST00000478503 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.73
SH3D19-207ENST00000478503 CHKB-CPT1BH3BT56 60 aa4.21□□□□□ -1.74
SH3D19-207ENST00000478503 CRPP02741 224 aa4.21□□□□□ -1.74
SH3D19-207ENST00000478503 C16orf74Q96GX8 76 aa4.21□□□□□ -1.74
SH3D19-207ENST00000478503 ICOSQ9Y6W8 199 aa4.21□□□□□ -1.74
SH3D19-207ENST00000478503 LINC00308Q8TCZ7 52 aa4.2□□□□□ -1.74
SH3D19-207ENST00000478503 DIRC1Q969H9 104 aa4.2□□□□□ -1.74
SH3D19-207ENST00000478503 TRAV13-2A0A0B4J235 113 aa4.2□□□□□ -1.74
SH3D19-207ENST00000478503 LINC00158P58513 81 aa4.2□□□□□ -1.74
SH3D19-207ENST00000478503 BAHCC1Q9P281 2608 aa4.2□□□□□ -1.74
SH3D19-207ENST00000478503 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
SH3D19-207ENST00000478503 A0A0B4J2C4 111 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 F8WEM9 126 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 ACYP1P07311 99 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 TRBV6-8A0A0A6YYG3 113 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 TRBV10-1A0A0K0K1A3 114 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 MIR7-3HGQ8N6C7 128 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 LRCOL1A6NCL2 159 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 NDUFA1O15239 70 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 ATXN8Q156A1 80 aa4.19□□□□□ -1.74
SH3D19-207ENST00000478503 CHTF8P0CG12 524 aa4.18□□□□□ -1.74
SH3D19-207ENST00000478503 ESRGQ1W209 222 aa4.18□□□□□ -1.74
SH3D19-207ENST00000478503 COX6CP09669 75 aa4.18□□□□□ -1.74
SH3D19-207ENST00000478503 IGLV5-39A0A0G2JS06 123 aa4.18□□□□□ -1.74
SH3D19-207ENST00000478503 TRBV6-4A0A1B0GX49 114 aa4.18□□□□□ -1.74
SH3D19-207ENST00000478503 H7C423 109 aa4.18□□□□□ -1.74
SH3D19-207ENST00000478503 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
SH3D19-207ENST00000478503 IGHV4-30-4P0DP06 118 aa4.17□□□□□ -1.74
SH3D19-207ENST00000478503 IGHV4-28A0A0C4DH34 117 aa4.17□□□□□ -1.74
SH3D19-207ENST00000478503 C9orf116Q5BN46 136 aaPredicted RBP4.17□□□□□ -1.74
SH3D19-207ENST00000478503 COX7B2Q8TF08 81 aa4.17□□□□□ -1.74
SH3D19-207ENST00000478503 ATP11AUNQ6ZP68 121 aa4.17□□□□□ -1.74
SH3D19-207ENST00000478503 SNURFQ9Y675 71 aa4.17□□□□□ -1.74
SH3D19-207ENST00000478503 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
SH3D19-207ENST00000478503 PHF5AQ7RTV0 110 aaKnown RBP4.16□□□□□ -1.74
SH3D19-207ENST00000478503 RMI2Q96E14 147 aa4.16□□□□□ -1.74
SH3D19-207ENST00000478503 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
SH3D19-207ENST00000478503 K7ERS5 55 aa4.16□□□□□ -1.74
SH3D19-207ENST00000478503 ANGP03950 147 aaKnown RBP4.16□□□□□ -1.74
SH3D19-207ENST00000478503 ADM2Q7Z4H4 148 aa4.16□□□□□ -1.74
SH3D19-207ENST00000478503 LINC00959A0A1B0GUT2 108 aa4.16□□□□□ -1.74
SH3D19-207ENST00000478503 LUZP6Q538Z0 58 aa4.15□□□□□ -1.74
SH3D19-207ENST00000478503 TRBV10-2A0A0K0K1G8 114 aa4.15□□□□□ -1.75
SH3D19-207ENST00000478503 SDIM1Q6ZPB5 146 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms