RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
SMARCE1-209ENST00000478349 TMEM126AQ9H061 195 aa8.5□□□□□ -1.05
SMARCE1-209ENST00000478349 IFITM2Q01629 132 aa8.49□□□□□ -1.05
SMARCE1-209ENST00000478349 A0A096LNJ9 63 aa8.48□□□□□ -1.05
SMARCE1-209ENST00000478349 PRLHP81277 87 aa8.48□□□□□ -1.05
SMARCE1-209ENST00000478349 ATP6V1G1O75348 118 aa8.47□□□□□ -1.05
SMARCE1-209ENST00000478349 ZNF625Q96I27 306 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1-209ENST00000478349 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
SMARCE1-209ENST00000478349 SCO1O75880 301 aa8.46□□□□□ -1.06
SMARCE1-209ENST00000478349 SNAPINO95295 136 aa8.46□□□□□ -1.06
SMARCE1-209ENST00000478349 LINC00158P58513 81 aa8.46□□□□□ -1.06
SMARCE1-209ENST00000478349 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.06
SMARCE1-209ENST00000478349 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-209ENST00000478349 ZNF706Q9Y5V0 76 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-209ENST00000478349 TMEM238C9JI98 176 aa8.45□□□□□ -1.06
SMARCE1-209ENST00000478349 PMCHL1Q16048 86 aa8.45□□□□□ -1.06
SMARCE1-209ENST00000478349 KRTAP13-2Q52LG2 175 aa8.45□□□□□ -1.06
SMARCE1-209ENST00000478349 CBLN2Q8IUK8 224 aa8.45□□□□□ -1.06
SMARCE1-209ENST00000478349 SVBPQ8N300 66 aa8.45□□□□□ -1.06
SMARCE1-209ENST00000478349 LINC00587B1AMM8 73 aa8.44□□□□□ -1.06
SMARCE1-209ENST00000478349 M0R378 163 aa8.44□□□□□ -1.06
SMARCE1-209ENST00000478349 S100A12P80511 92 aa8.44□□□□□ -1.06
SMARCE1-209ENST00000478349 CHCHD1Q96BP2 118 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-209ENST00000478349 URB1-AS1Q96HZ7 61 aa8.44□□□□□ -1.06
SMARCE1-209ENST00000478349 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
SMARCE1-209ENST00000478349 TRAV12-1A0A0B4J245 112 aa8.43□□□□□ -1.06
SMARCE1-209ENST00000478349 APOC3P02656 99 aa8.43□□□□□ -1.06
SMARCE1-209ENST00000478349 HIGD2AQ9BW72 106 aa8.43□□□□□ -1.06
SMARCE1-209ENST00000478349 LPAP08519 4548 aa8.42□□□□□ -1.06
SMARCE1-209ENST00000478349 HERV-K104P63124 156 aa8.42□□□□□ -1.06
SMARCE1-209ENST00000478349 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
SMARCE1-209ENST00000478349 MEIG1Q5JSS6 88 aa8.41□□□□□ -1.06
SMARCE1-209ENST00000478349 IFI27L1Q96BM0 104 aa8.41□□□□□ -1.06
SMARCE1-209ENST00000478349 PLEKHB2Q96CS7 222 aa8.41□□□□□ -1.06
SMARCE1-209ENST00000478349 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
SMARCE1-209ENST00000478349 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
SMARCE1-209ENST00000478349 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
SMARCE1-209ENST00000478349 PRYO14603 147 aa8.4□□□□□ -1.06
SMARCE1-209ENST00000478349 TPRXLQ17RH7 258 aa8.4□□□□□ -1.06
SMARCE1-209ENST00000478349 IGLV7-46A0A075B6I9 117 aa8.38□□□□□ -1.07
SMARCE1-209ENST00000478349 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
SMARCE1-209ENST00000478349 HSBP1O75506 76 aa8.38□□□□□ -1.07
SMARCE1-209ENST00000478349 BOD1L2Q8IYS8 172 aa8.38□□□□□ -1.07
SMARCE1-209ENST00000478349 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
SMARCE1-209ENST00000478349 SPRR4Q96PI1 79 aa8.37□□□□□ -1.07
SMARCE1-209ENST00000478349 MYMXA0A1B0GTQ4 84 aa8.36□□□□□ -1.07
SMARCE1-209ENST00000478349 ETDCA0A1B0GVM5 59 aa8.36□□□□□ -1.07
SMARCE1-209ENST00000478349 SMIM13P0DJ93 91 aa8.36□□□□□ -1.07
SMARCE1-209ENST00000478349 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
SMARCE1-209ENST00000478349 Q8NDZ9 215 aa8.36□□□□□ -1.07
SMARCE1-209ENST00000478349 MIR7-3HGQ8N6C7 128 aa8.35□□□□□ -1.07
SMARCE1-209ENST00000478349 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
SMARCE1-209ENST00000478349 FP248Q71RG6 208 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-209ENST00000478349 C3orf22Q8N5N4 141 aa8.34□□□□□ -1.07
SMARCE1-209ENST00000478349 KCNQ1DNQ9H478 68 aa8.34□□□□□ -1.07
SMARCE1-209ENST00000478349 NCR3O14931 201 aa8.33□□□□□ -1.08
SMARCE1-209ENST00000478349 PLNP26678 52 aa8.33□□□□□ -1.08
SMARCE1-209ENST00000478349 HERVK_113P61574 105 aa8.32□□□□□ -1.08
SMARCE1-209ENST00000478349 MIEN1Q9BRT3 115 aa8.32□□□□□ -1.08
SMARCE1-209ENST00000478349 H0Y8G0 127 aa8.31□□□□□ -1.08
SMARCE1-209ENST00000478349 SPRR1AP35321 89 aa8.31□□□□□ -1.08
SMARCE1-209ENST00000478349 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
SMARCE1-209ENST00000478349 MUC2Q02817 5179 aa8.3□□□□□ -1.08
SMARCE1-209ENST00000478349 LEPROTL1O95214 131 aa8.3□□□□□ -1.08
SMARCE1-209ENST00000478349 TRBV10-3A0A0K0K1G6 114 aa8.29□□□□□ -1.08
SMARCE1-209ENST00000478349 TRBV10-2A0A0K0K1G8 114 aa8.29□□□□□ -1.08
SMARCE1-209ENST00000478349 SPINK1P00995 79 aa8.29□□□□□ -1.08
SMARCE1-209ENST00000478349 NMUP48645 174 aa8.29□□□□□ -1.08
SMARCE1-209ENST00000478349 FAM19A2Q8N3H0 131 aa8.29□□□□□ -1.08
SMARCE1-209ENST00000478349 YPEL4Q96NS1 127 aa8.29□□□□□ -1.08
SMARCE1-209ENST00000478349 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
SMARCE1-209ENST00000478349 LEPROTO15243 131 aa8.28□□□□□ -1.08
SMARCE1-209ENST00000478349 Q8NBF4 154 aa8.28□□□□□ -1.08
SMARCE1-209ENST00000478349 SMCR5Q8TEV8 140 aa8.28□□□□□ -1.08
SMARCE1-209ENST00000478349 SPANXB1Q9NS25 103 aaPredicted RBP8.28□□□□□ -1.08
SMARCE1-209ENST00000478349 DDTP30046 118 aa8.27□□□□□ -1.09
SMARCE1-209ENST00000478349 KRTAP9-2Q9BYQ4 174 aa8.27□□□□□ -1.09
SMARCE1-209ENST00000478349 CBY1Q9Y3M2 126 aa8.27□□□□□ -1.09
SMARCE1-209ENST00000478349 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
SMARCE1-209ENST00000478349 DPM2O94777 84 aa8.26□□□□□ -1.09
SMARCE1-209ENST00000478349 LGALS3P17931 250 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-209ENST00000478349 JOSD1Q15040 202 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-209ENST00000478349 LINC00483Q53H64 154 aa8.26□□□□□ -1.09
SMARCE1-209ENST00000478349 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
SMARCE1-209ENST00000478349 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-209ENST00000478349 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-209ENST00000478349 J3QQQ9 107 aa8.25□□□□□ -1.09
SMARCE1-209ENST00000478349 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
SMARCE1-209ENST00000478349 GAGE2AQ6NT46 116 aa8.25□□□□□ -1.09
SMARCE1-209ENST00000478349 NDUFC2O95298 119 aa8.24□□□□□ -1.09
SMARCE1-209ENST00000478349 GHRHP01286 108 aa8.24□□□□□ -1.09
SMARCE1-209ENST00000478349 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-209ENST00000478349 DAND5Q8N907 189 aa8.24□□□□□ -1.09
SMARCE1-209ENST00000478349 B5MCH6 92 aa8.23□□□□□ -1.09
SMARCE1-209ENST00000478349 SERF1AO75920 110 aa8.23□□□□□ -1.09
SMARCE1-209ENST00000478349 IGKCP01834 107 aa8.23□□□□□ -1.09
SMARCE1-209ENST00000478349 TRGC2P03986 189 aa8.23□□□□□ -1.09
SMARCE1-209ENST00000478349 Q6ZRX8 168 aa8.23□□□□□ -1.09
SMARCE1-209ENST00000478349 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
SMARCE1-209ENST00000478349 TSPEAR-AS2P59090 65 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms