RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 DCTN3O75935 186 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 NDUFC2O95298 119 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 APOEP02649 317 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 HIST1H1EP10412 219 aaKnown RBP-1.54□□□□□ -2.66
CALD1-218ENST00000478075 CCL2P13500 99 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 LCN1P31025 176 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 GNGT1P63211 74 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 GNG5P63218 68 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 PSMG4Q5JS54 123 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 MIC13Q5XKP0 118 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 TMED4Q7Z7H5 227 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 TAC4Q86UU9 113 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 NCOR1P1Q9H4R4 102 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 FGFR1OP2Q9NVK5 253 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 PLEKHJ1Q9NW61 149 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 LAMTOR2Q9Y2Q5 125 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 DNAH14Q0VDD8 3507 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 MON2Q7Z3U7 1717 aa-1.54□□□□□ -2.66
CALD1-218ENST00000478075 C5P01031 1676 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 A2ML1A8K2U0 1454 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 ZFYVE9O95405 1425 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 C9orf84Q5VXU9 1444 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 H3BQF6 201 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 CHKB-CPT1BH3BT56 60 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 IL5P05113 134 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 ACYP1P07311 99 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 S100A11P31949 105 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 RPL22P35268 128 aaKnown RBP-1.55□□□□□ -2.66
CALD1-218ENST00000478075 PPP1R2P41236 205 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 PSPHP78330 225 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 HSD52Q0P140 79 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 LTC4SQ16873 150 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 OGFRL1Q5TC84 451 aaPredicted RBP-1.55□□□□□ -2.66
CALD1-218ENST00000478075 SHPRHQ149N8 1683 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 UNC80Q8N2C7 3258 aa-1.55□□□□□ -2.66
CALD1-218ENST00000478075 ZFYVE16Q7Z3T8 1539 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 LRRIQ1Q96JM4 1722 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 M0R129 80 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 SNCGO76070 127 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 SERPINB1P30740 379 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 RPL38P63173 70 aaKnown RBP-1.56□□□□□ -2.66
CALD1-218ENST00000478075 PMS2P3Q13401 168 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 DHRS4L2Q6PKH6 230 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 SFTA2Q6UW10 78 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 CTAGE3PQ8IX95 158 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 BANF2Q9H503 90 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.56□□□□□ -2.66
CALD1-218ENST00000478075 ARMC1Q9NVT9 282 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 PRNDQ9UKY0 176 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 FAM32AQ9Y421 112 aaKnown RBP-1.56□□□□□ -2.66
CALD1-218ENST00000478075 AP4S1Q9Y587 144 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 VCANP13611 3396 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 TOP2BQ02880 1626 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 LRRC7Q96NW7 1537 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 FAM135AQ9P2D6 1515 aa-1.56□□□□□ -2.66
CALD1-218ENST00000478075 MAP3K5Q99683 1374 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 E7EQ34 232 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 CETN3O15182 167 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 HSPE1P61604 102 aaKnown RBP-1.57□□□□□ -2.66
CALD1-218ENST00000478075 MRPS25P82663 173 aaKnown RBP-1.57□□□□□ -2.66
CALD1-218ENST00000478075 TMEM97Q5BJF2 176 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 PPP1R2P3Q6NXS1 205 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 SPTSSAQ969W0 71 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 SS18L2Q9UHA2 77 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 SSR3Q9UNL2 185 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 NWD1Q149M9 1564 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 THOC2Q8NI27 1593 aaKnown RBP-1.57□□□□□ -2.66
CALD1-218ENST00000478075 UBR3Q6ZT12 1888 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 MED14O60244 1454 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 NCOA2Q15596 1464 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 ZNF518AQ6AHZ1 1483 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 EEA1Q15075 1411 aa-1.57□□□□□ -2.66
CALD1-218ENST00000478075 ROCK1Q13464 1354 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 PLIN4Q96Q06 1357 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 FABP12A6NFH5 140 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 NDUFB6O95139 128 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 CSTAP01040 98 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 RPS27P42677 84 aaKnown RBP-1.58□□□□□ -2.66
CALD1-218ENST00000478075 LIN52Q52LA3 116 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 RPS27LQ71UM5 84 aaKnown RBP-1.58□□□□□ -2.66
CALD1-218ENST00000478075 MNS1Q8NEH6 495 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 PTH2Q96A98 100 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 LYRM2Q9NU23 88 aaPredicted RBP-1.58□□□□□ -2.66
CALD1-218ENST00000478075 UQCR10Q9UDW1 63 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 GUCA1BQ9UMX6 200 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 MED31Q9Y3C7 131 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 SERP1Q9Y6X1 66 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 KIAA0586Q9BVV6 1533 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 SPHKAPQ2M3C7 1700 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 MRC2Q9UBG0 1479 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 MYH3P11055 1940 aa-1.58□□□□□ -2.66
CALD1-218ENST00000478075 USP34Q70CQ2 3546 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.59□□□□□ -2.66
CALD1-218ENST00000478075 H3BUA1 57 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 SMIM24O75264 130 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 LEPROTL1O95214 131 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 MT-ND4LP03901 98 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 NCBP2-AS2Q69YL0 99 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 TCEAL4Q96EI5 215 aa-1.59□□□□□ -2.66
CALD1-218ENST00000478075 C7orf50Q9BRJ6 194 aaKnown RBP-1.59□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms