RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 Q8N8P6 123 aa5.39□□□□□ -1.55
COL4A5-204ENST00000477429 HERVK_113P63121 156 aa5.38□□□□□ -1.55
COL4A5-204ENST00000477429 CBLN2Q8IUK8 224 aa5.38□□□□□ -1.55
COL4A5-204ENST00000477429 HIGD2AQ9BW72 106 aa5.38□□□□□ -1.55
COL4A5-204ENST00000477429 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
COL4A5-204ENST00000477429 IGLV5-45A0A087WSX0 123 aa5.37□□□□□ -1.55
COL4A5-204ENST00000477429 CXCL5P42830 114 aa5.37□□□□□ -1.55
COL4A5-204ENST00000477429 SPAG11AQ6PDA7 123 aa5.37□□□□□ -1.55
COL4A5-204ENST00000477429 MAP1LC3AQ9H492 121 aa5.37□□□□□ -1.55
COL4A5-204ENST00000477429 GEMIN7Q9H840 131 aaKnown RBP5.37□□□□□ -1.55
COL4A5-204ENST00000477429 NAT8Q9UHE5 227 aa5.37□□□□□ -1.55
COL4A5-204ENST00000477429 PFN2P35080 140 aa5.36□□□□□ -1.55
COL4A5-204ENST00000477429 KRTAP6-3Q3LI67 103 aa5.36□□□□□ -1.55
COL4A5-204ENST00000477429 PDZD11Q5EBL8 140 aa5.36□□□□□ -1.55
COL4A5-204ENST00000477429 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
COL4A5-204ENST00000477429 S100A8P05109 93 aa5.35□□□□□ -1.55
COL4A5-204ENST00000477429 Q8N377 158 aa5.35□□□□□ -1.55
COL4A5-204ENST00000477429 TINCRA0A1B0GVN0 87 aa5.34□□□□□ -1.55
COL4A5-204ENST00000477429 RAB14P61106 215 aa5.34□□□□□ -1.55
COL4A5-204ENST00000477429 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
COL4A5-204ENST00000477429 TOMM6Q96B49 74 aa5.34□□□□□ -1.55
COL4A5-204ENST00000477429 TIMM17AQ99595 171 aa5.34□□□□□ -1.55
COL4A5-204ENST00000477429 GPR98Q8WXG9 6306 aa5.34□□□□□ -1.55
COL4A5-204ENST00000477429 ORMDL2Q53FV1 153 aa5.33□□□□□ -1.56
COL4A5-204ENST00000477429 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
COL4A5-204ENST00000477429 C5orf52A6NGY3 159 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 SPINK1P00995 79 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 CFC1BP0CG36 223 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 SEC11AP67812 179 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 PCOTHQ58A44 107 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 ATP5L2Q7Z4Y8 100 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 ZNF625Q96I27 306 aaPredicted RBP5.32□□□□□ -1.56
COL4A5-204ENST00000477429 GNB1LQ9BYB4 327 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 CST9LQ9H4G1 147 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 LAMTOR2Q9Y2Q5 125 aa5.32□□□□□ -1.56
COL4A5-204ENST00000477429 KIAA1644Q3SXP7 199 aa5.31□□□□□ -1.56
COL4A5-204ENST00000477429 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
COL4A5-204ENST00000477429 ERG28Q9UKR5 140 aa5.31□□□□□ -1.56
COL4A5-204ENST00000477429 IGLV5-39A0A0G2JS06 123 aa5.3□□□□□ -1.56
COL4A5-204ENST00000477429 KRTAP4-16G5E9R7 235 aaPredicted RBP5.3□□□□□ -1.56
COL4A5-204ENST00000477429 ERC2-IT1O76042 136 aa5.3□□□□□ -1.56
COL4A5-204ENST00000477429 MOBPQ13875 183 aa5.3□□□□□ -1.56
COL4A5-204ENST00000477429 LINC00483Q53H64 154 aa5.3□□□□□ -1.56
COL4A5-204ENST00000477429 ERASQ7Z444 233 aa5.3□□□□□ -1.56
COL4A5-204ENST00000477429 SCGB3A1Q96QR1 104 aa5.3□□□□□ -1.56
COL4A5-204ENST00000477429 IGLV8-61A0A075B6I0 122 aa5.29□□□□□ -1.56
COL4A5-204ENST00000477429 ATP5LO75964 103 aa5.29□□□□□ -1.56
COL4A5-204ENST00000477429 NXT2Q9NPJ8 142 aaKnown RBP5.29□□□□□ -1.56
COL4A5-204ENST00000477429 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
COL4A5-204ENST00000477429 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
COL4A5-204ENST00000477429 K7EMI3 77 aa5.27□□□□□ -1.57
COL4A5-204ENST00000477429 ZNF22P17026 224 aaPredicted RBP5.27□□□□□ -1.57
COL4A5-204ENST00000477429 SPRR1AP35321 89 aa5.27□□□□□ -1.57
COL4A5-204ENST00000477429 RPL24P83731 157 aaKnown RBP5.27□□□□□ -1.57
COL4A5-204ENST00000477429 PAPPA-AS1Q5QFB9 102 aa5.27□□□□□ -1.57
COL4A5-204ENST00000477429 GAGE2AQ6NT46 116 aa5.27□□□□□ -1.57
COL4A5-204ENST00000477429 AKAP14Q86UN6 197 aa5.27□□□□□ -1.57
COL4A5-204ENST00000477429 A0A0U1RRA0 63 aa5.26□□□□□ -1.57
COL4A5-204ENST00000477429 SNRPEP62304 92 aaKnown RBP5.26□□□□□ -1.57
COL4A5-204ENST00000477429 UBE2V1Q13404 147 aa5.26□□□□□ -1.57
COL4A5-204ENST00000477429 PEA15Q15121 130 aa5.26□□□□□ -1.57
COL4A5-204ENST00000477429 C9orf92A6NGG3 77 aa5.25□□□□□ -1.57
COL4A5-204ENST00000477429 LINC01546A6NGU7 62 aa5.25□□□□□ -1.57
COL4A5-204ENST00000477429 NCR3O14931 201 aa5.25□□□□□ -1.57
COL4A5-204ENST00000477429 SLC25A20O43772 301 aa5.25□□□□□ -1.57
COL4A5-204ENST00000477429 IGLC3P0DOY3 106 aa5.25□□□□□ -1.57
COL4A5-204ENST00000477429 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
COL4A5-204ENST00000477429 PMVKQ15126 192 aa5.25□□□□□ -1.57
COL4A5-204ENST00000477429 ZNF706Q9Y5V0 76 aaPredicted RBP5.25□□□□□ -1.57
COL4A5-204ENST00000477429 A0A096LNJ9 63 aa5.24□□□□□ -1.57
COL4A5-204ENST00000477429 M0R2T5 61 aa5.24□□□□□ -1.57
COL4A5-204ENST00000477429 Q9BRP9 147 aa5.24□□□□□ -1.57
COL4A5-204ENST00000477429 A0A1B0GVG6 124 aa5.23□□□□□ -1.57
COL4A5-204ENST00000477429 COX17Q14061 63 aa5.23□□□□□ -1.57
COL4A5-204ENST00000477429 KCNQ1DNQ9H478 68 aa5.23□□□□□ -1.57
COL4A5-204ENST00000477429 NDUFA12Q9UI09 145 aa5.23□□□□□ -1.57
COL4A5-204ENST00000477429 TRBV10-3A0A0K0K1G6 114 aa5.22□□□□□ -1.57
COL4A5-204ENST00000477429 C11orf86A6NJI1 115 aa5.22□□□□□ -1.57
COL4A5-204ENST00000477429 H3BRM9 83 aa5.22□□□□□ -1.57
COL4A5-204ENST00000477429 Q75L30 129 aa5.22□□□□□ -1.57
COL4A5-204ENST00000477429 SSBP3-AS1Q7Z2R9 100 aa5.22□□□□□ -1.57
COL4A5-204ENST00000477429 LINC00158P58513 81 aa5.21□□□□□ -1.58
COL4A5-204ENST00000477429 FAM19A2Q8N3H0 131 aa5.21□□□□□ -1.58
COL4A5-204ENST00000477429 URB1-AS1Q96HZ7 61 aa5.21□□□□□ -1.58
COL4A5-204ENST00000477429 ETDCA0A1B0GVM5 59 aa5.2□□□□□ -1.58
COL4A5-204ENST00000477429 SMIM13P0DJ93 91 aa5.2□□□□□ -1.58
COL4A5-204ENST00000477429 NDUFA6P56556 154 aa5.2□□□□□ -1.58
COL4A5-204ENST00000477429 BOD1L2Q8IYS8 172 aa5.2□□□□□ -1.58
COL4A5-204ENST00000477429 G0S2P27469 103 aa5.19□□□□□ -1.58
COL4A5-204ENST00000477429 ST20-AS1Q8NBB2 130 aa5.19□□□□□ -1.58
COL4A5-204ENST00000477429 MT-ND4LP03901 98 aa5.18□□□□□ -1.58
COL4A5-204ENST00000477429 PMCHL1Q16048 86 aa5.18□□□□□ -1.58
COL4A5-204ENST00000477429 KMT2DO14686 5537 aa5.18□□□□□ -1.58
COL4A5-204ENST00000477429 HRCT1Q6UXD1 115 aa5.17□□□□□ -1.58
COL4A5-204ENST00000477429 MIR7-3HGQ8N6C7 128 aa5.17□□□□□ -1.58
COL4A5-204ENST00000477429 TMEM170BQ5T4T1 132 aa5.16□□□□□ -1.58
COL4A5-204ENST00000477429 C9orf153Q5TBE3 101 aa5.16□□□□□ -1.58
COL4A5-204ENST00000477429 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
COL4A5-204ENST00000477429 PAM16Q9Y3D7 125 aa5.15□□□□□ -1.59
COL4A5-204ENST00000477429 TMEM223A0PJW6 202 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms